RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 PPP1R9BQ96SB3 815 aa13.44□□□□□ -0.26
COPA-202ENST00000368069 CNNM2Q9H8M5 875 aa13.44□□□□□ -0.26
COPA-202ENST00000368069 NCOA5Q9HCD5 579 aaKnown RBP13.44□□□□□ -0.26
COPA-202ENST00000368069 A0A1B0GVL5 298 aa13.44□□□□□ -0.26
COPA-202ENST00000368069 EYA2O00167 538 aa13.44□□□□□ -0.26
COPA-202ENST00000368069 RXRAP19793 462 aa13.44□□□□□ -0.26
COPA-202ENST00000368069 BEND3Q5T5X7 828 aa13.44□□□□□ -0.26
COPA-202ENST00000368069 IQCEQ6IPM2 695 aa13.44□□□□□ -0.26
COPA-202ENST00000368069 CLSTN2Q9H4D0 955 aa13.44□□□□□ -0.26
COPA-202ENST00000368069 ZNF287Q9HBT7 754 aa13.44□□□□□ -0.26
COPA-202ENST00000368069 ZNF397Q8NF99 534 aaPredicted RBP13.44□□□□□ -0.26
COPA-202ENST00000368069 EDC3Q96F86 508 aaKnown RBP13.44□□□□□ -0.26
COPA-202ENST00000368069 SLC52A2Q9HAB3 445 aa13.44□□□□□ -0.26
COPA-202ENST00000368069 ANKIB1Q9P2G1 1089 aa13.44□□□□□ -0.26
COPA-202ENST00000368069 CDK12Q9NYV4 1490 aaPredicted RBP13.44□□□□□ -0.26
COPA-202ENST00000368069 GOLGA6L9A6NEM1 432 aa13.43□□□□□ -0.26
COPA-202ENST00000368069 ZPR1O75312 459 aa13.43□□□□□ -0.26
COPA-202ENST00000368069 CYP7A1P22680 504 aa13.43□□□□□ -0.26
COPA-202ENST00000368069 ZNF444Q8N0Y2 327 aaPredicted RBP13.43□□□□□ -0.26
COPA-202ENST00000368069 GBP3Q9H0R5 595 aa13.43□□□□□ -0.26
COPA-202ENST00000368069 STAP2Q9UGK3 403 aa13.43□□□□□ -0.26
COPA-202ENST00000368069 RGS12O14924 1447 aa13.43□□□□□ -0.26
COPA-202ENST00000368069 IL2RBP14784 551 aa13.43□□□□□ -0.26
COPA-202ENST00000368069 FAM160A1Q05DH4 1040 aa13.43□□□□□ -0.26
COPA-202ENST00000368069 BRAPQ7Z569 592 aa13.43□□□□□ -0.26
COPA-202ENST00000368069 HELBQ8NG08 1087 aaPredicted RBP13.43□□□□□ -0.26
COPA-202ENST00000368069 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.43□□□□□ -0.267e-6■□□□□ 9.2
COPA-202ENST00000368069 DNAI1Q9UI46 699 aa13.43□□□□□ -0.26
COPA-202ENST00000368069 V9GYY5 206 aaPredicted RBP13.43□□□□□ -0.26
COPA-202ENST00000368069 POLR3GO15318 223 aaPredicted RBP13.43□□□□□ -0.26
COPA-202ENST00000368069 JAK2O60674 1132 aa13.43□□□□□ -0.26
COPA-202ENST00000368069 AFMP43652 599 aa13.43□□□□□ -0.26
COPA-202ENST00000368069 CCDC152Q4G0S7 254 aa13.43□□□□□ -0.26
COPA-202ENST00000368069 PRR36Q9H6K5 1346 aa13.43□□□□□ -0.26
COPA-202ENST00000368069 RNF17Q9BXT8 1623 aaKnown RBP13.43□□□□□ -0.26
COPA-202ENST00000368069 TSPY2A6NKD2 308 aa13.43□□□□□ -0.26
COPA-202ENST00000368069 GIGYF1O75420 1035 aaPredicted RBP13.43□□□□□ -0.26
COPA-202ENST00000368069 YEATS4O95619 227 aa13.43□□□□□ -0.26
COPA-202ENST00000368069 JAKMIP3Q5VZ66 844 aa13.43□□□□□ -0.26
COPA-202ENST00000368069 IFNKQ9P0W0 207 aa13.43□□□□□ -0.26
COPA-202ENST00000368069 SLC4A8Q2Y0W8 1093 aa13.42□□□□□ -0.26
COPA-202ENST00000368069 FKBP15Q5T1M5 1219 aa13.42□□□□□ -0.26
COPA-202ENST00000368069 KBTBD3Q8NAB2 608 aa13.42□□□□□ -0.26
COPA-202ENST00000368069 ZNF496Q96IT1 587 aaPredicted RBP13.42□□□□□ -0.26
COPA-202ENST00000368069 ZNF594Q96JF6 807 aaPredicted RBP13.42□□□□□ -0.26
COPA-202ENST00000368069 ATL3Q6DD88 541 aa13.42□□□□□ -0.26
COPA-202ENST00000368069 ESR2Q92731 530 aa13.42□□□□□ -0.26
COPA-202ENST00000368069 EAF2Q96CJ1 260 aaPredicted RBP13.42□□□□□ -0.26
COPA-202ENST00000368069 CBX8Q9HC52 389 aa13.42□□□□□ -0.26
COPA-202ENST00000368069 ABCA6Q8N139 1617 aa13.42□□□□□ -0.26
COPA-202ENST00000368069 SPA17Q15506 151 aa13.42□□□□□ -0.26
COPA-202ENST00000368069 TMTC2Q8N394 836 aa13.42□□□□□ -0.26
COPA-202ENST00000368069 CCDC12Q8WUD4 166 aaPredicted RBP13.42□□□□□ -0.26
COPA-202ENST00000368069 LLPHQ9BRT6 129 aaKnown RBP13.42□□□□□ -0.26
COPA-202ENST00000368069 POLR1AO95602 1720 aaPredicted RBP13.42□□□□□ -0.26
COPA-202ENST00000368069 IGSF1Q8N6C5 1336 aa13.42□□□□□ -0.26
COPA-202ENST00000368069 A0A0D9SFI3 127 aa13.42□□□□□ -0.26
COPA-202ENST00000368069 H0YHG0 523 aa13.42□□□□□ -0.26
COPA-202ENST00000368069 ZSWIM4Q9H7M6 989 aa13.42□□□□□ -0.26
COPA-202ENST00000368069 ZHX1Q9UKY1 873 aaPredicted RBP13.42□□□□□ -0.26
COPA-202ENST00000368069 E9PCH4 1651 aa13.42□□□□□ -0.26
COPA-202ENST00000368069 IRS4O14654 1257 aaPredicted RBP13.41□□□□□ -0.26
COPA-202ENST00000368069 KIF5BP33176 963 aa13.41□□□□□ -0.26
COPA-202ENST00000368069 ZMYND15Q9H091 742 aa13.41□□□□□ -0.26
COPA-202ENST00000368069 KDRP35968 1356 aa13.41□□□□□ -0.26
COPA-202ENST00000368069 RBM5P52756 815 aaKnown RBP eCLIP13.41□□□□□ -0.26
COPA-202ENST00000368069 FAM89AQ96GI7 184 aa13.41□□□□□ -0.26
COPA-202ENST00000368069 ROBO2Q9HCK4 1378 aa13.41□□□□□ -0.26
COPA-202ENST00000368069 NEURL1BA8MQ27 555 aa13.41□□□□□ -0.26
COPA-202ENST00000368069 PDE4BQ07343 736 aa13.41□□□□□ -0.26
COPA-202ENST00000368069 ZSCAN29Q8IWY8 852 aaPredicted RBP13.41□□□□□ -0.26
COPA-202ENST00000368069 LAMC1P11047 1609 aa13.41□□□□□ -0.26
COPA-202ENST00000368069 GLI2P10070 1586 aa13.41□□□□□ -0.26
COPA-202ENST00000368069 ARAP3Q8WWN8 1544 aa13.41□□□□□ -0.26
COPA-202ENST00000368069 PATL2C9JE40 543 aaKnown RBP13.4□□□□□ -0.26
COPA-202ENST00000368069 N4BP3O15049 544 aa13.4□□□□□ -0.26
COPA-202ENST00000368069 RASEFQ8IZ41 740 aa13.4□□□□□ -0.26
COPA-202ENST00000368069 LSG1Q9H089 658 aaKnown RBP13.4□□□□□ -0.26
COPA-202ENST00000368069 KAT14Q9H8E8 782 aa13.4□□□□□ -0.26
COPA-202ENST00000368069 PCDH11XQ9BZA7 1347 aa13.4□□□□□ -0.26
COPA-202ENST00000368069 PCDH11YQ9BZA8 1340 aa13.4□□□□□ -0.26
COPA-202ENST00000368069 IFIT1BQ5T764 474 aaKnown RBP13.4□□□□□ -0.26
COPA-202ENST00000368069 OTUD7BQ6GQQ9 843 aa13.4□□□□□ -0.26
COPA-202ENST00000368069 MYO6Q9UM54 1294 aa13.4□□□□□ -0.26
COPA-202ENST00000368069 MTMR6Q9Y217 621 aa13.4□□□□□ -0.26
COPA-202ENST00000368069 USP6P35125 1406 aa13.4□□□□□ -0.26
COPA-202ENST00000368069 SLU7O95391 586 aaKnown RBP13.4□□□□□ -0.26
COPA-202ENST00000368069 UBA7P41226 1012 aa13.4□□□□□ -0.26
COPA-202ENST00000368069 BMS1Q14692 1282 aaKnown RBP13.4□□□□□ -0.26
COPA-202ENST00000368069 MAGEB6Q8N7X4 407 aa13.4□□□□□ -0.26
COPA-202ENST00000368069 ATP5JP18859 108 aa13.4□□□□□ -0.26
COPA-202ENST00000368069 CRACR2AQ9BSW2 395 aa13.4□□□□□ -0.26
COPA-202ENST00000368069 ZSWIM6Q9HCJ5 1215 aa13.4□□□□□ -0.26
COPA-202ENST00000368069 TPCN1Q9ULQ1 816 aa13.4□□□□□ -0.26
COPA-202ENST00000368069 ZNF75DP51815 510 aa13.39□□□□□ -0.27
COPA-202ENST00000368069 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.39□□□□□ -0.27
COPA-202ENST00000368069 MPHOSPH10O00566 681 aaKnown RBP13.39□□□□□ -0.27
COPA-202ENST00000368069 MTIF2P46199 727 aaKnown RBP13.39□□□□□ -0.27
COPA-202ENST00000368069 DZIP3Q86Y13 1208 aaKnown RBP13.39□□□□□ -0.27
COPA-202ENST00000368069 MIGA1Q8NAN2 632 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 262.8 ms