RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 EPB41L2O43491 1005 aaKnown RBP14.62□□□□□ -0.07
USF1-203ENST00000368021 C21orf2O43822 256 aa14.62□□□□□ -0.07
USF1-203ENST00000368021 NPR1P16066 1061 aa14.62□□□□□ -0.07
USF1-203ENST00000368021 FGFR2P21802 821 aa14.62□□□□□ -0.07
USF1-203ENST00000368021 CCDC158Q5M9N0 1113 aa14.62□□□□□ -0.07
USF1-203ENST00000368021 LPIN2Q92539 896 aa14.62□□□□□ -0.07
USF1-203ENST00000368021 DDRGK1Q96HY6 314 aa14.62□□□□□ -0.07
USF1-203ENST00000368021 RFX7Q2KHR2 1363 aa14.61□□□□□ -0.07
USF1-203ENST00000368021 TNRC6CQ9HCJ0 1690 aaKnown RBP14.61□□□□□ -0.07
USF1-203ENST00000368021 SPEF2Q9C093 1822 aa14.61□□□□□ -0.07
USF1-203ENST00000368021 PRPF40BQ6NWY9 871 aaKnown RBP14.61□□□□□ -0.07
USF1-203ENST00000368021 ARAP2Q8WZ64 1704 aa14.61□□□□□ -0.07
USF1-203ENST00000368021 CNKSR1Q969H4 720 aa14.61□□□□□ -0.07
USF1-203ENST00000368021 ZNF512BQ96KM6 892 aaPredicted RBP14.61□□□□□ -0.07
USF1-203ENST00000368021 CRY2Q49AN0 593 aa14.6□□□□□ -0.07
USF1-203ENST00000368021 GORABQ5T7V8 394 aa14.6□□□□□ -0.07
USF1-203ENST00000368021 STYK1Q6J9G0 422 aa14.6□□□□□ -0.07
USF1-203ENST00000368021 OLFM4Q6UX06 510 aa14.6□□□□□ -0.07
USF1-203ENST00000368021 USP26Q9BXU7 913 aa14.6□□□□□ -0.07
USF1-203ENST00000368021 COL11A2P13942 1736 aaPredicted RBP14.6□□□□□ -0.07
USF1-203ENST00000368021 COL4A1P02462 1669 aa14.6□□□□□ -0.07
USF1-203ENST00000368021 ADORA1P30542 326 aa14.59□□□□□ -0.07
USF1-203ENST00000368021 RPS8P62241 208 aaKnown RBP14.59□□□□□ -0.07
USF1-203ENST00000368021 CHRNDQ07001 517 aa14.59□□□□□ -0.07
USF1-203ENST00000368021 DDX46Q7L014 1031 aaKnown RBP14.59□□□□□ -0.07
USF1-203ENST00000368021 RUFY2Q8WXA3 655 aa14.59□□□□□ -0.07
USF1-203ENST00000368021 BRCA1P38398 1863 aaKnown RBP14.59□□□□□ -0.07
USF1-203ENST00000368021 SGSM2O43147 1006 aa14.59□□□□□ -0.07
USF1-203ENST00000368021 IFIT1P09914 478 aaKnown RBP14.59□□□□□ -0.07
USF1-203ENST00000368021 SLC5A1P13866 664 aa14.59□□□□□ -0.07
USF1-203ENST00000368021 SLC51AQ86UW1 340 aa14.59□□□□□ -0.07
USF1-203ENST00000368021 CELF1Q92879 486 aaKnown RBP14.59□□□□□ -0.07
USF1-203ENST00000368021 DIAPH3Q9NSV4 1193 aa14.59□□□□□ -0.07
USF1-203ENST00000368021 TAF1P21675 1872 aa14.58□□□□□ -0.07
USF1-203ENST00000368021 A0A1B0GUL6 1792 aa14.58□□□□□ -0.07
USF1-203ENST00000368021 ALDH1B1P30837 517 aa14.58□□□□□ -0.08
USF1-203ENST00000368021 TTC39AQ5SRH9 613 aa14.58□□□□□ -0.08
USF1-203ENST00000368021 RBM17Q96I25 401 aaKnown RBP14.58□□□□□ -0.08
USF1-203ENST00000368021 FSD1Q9BTV5 496 aa14.58□□□□□ -0.08
USF1-203ENST00000368021 KBTBD3Q8NAB2 608 aa14.57□□□□□ -0.08
USF1-203ENST00000368021 HELBQ8NG08 1087 aaPredicted RBP14.57□□□□□ -0.08
USF1-203ENST00000368021 DNAJC2Q99543 621 aaKnown RBP14.57□□□□□ -0.08
USF1-203ENST00000368021 PAG1Q9NWQ8 432 aa14.57□□□□□ -0.08
USF1-203ENST00000368021 MINPP1Q9UNW1 487 aa14.57□□□□□ -0.08
USF1-203ENST00000368021 RAD50Q92878 1312 aa14.57□□□□□ -0.08
USF1-203ENST00000368021 YY1P25490 414 aa14.57□□□□□ -0.08
USF1-203ENST00000368021 ARID4AP29374 1257 aaPredicted RBP14.57□□□□□ -0.08
USF1-203ENST00000368021 GRAPQ13588 217 aa14.57□□□□□ -0.08
USF1-203ENST00000368021 UBE4AQ14139 1066 aa14.57□□□□□ -0.08
USF1-203ENST00000368021 FAM43AQ8N2R8 423 aa14.57□□□□□ -0.08
USF1-203ENST00000368021 GRAPLQ8TC17 118 aaPredicted RBP14.57□□□□□ -0.08
USF1-203ENST00000368021 SNRKQ9NRH2 765 aa14.57□□□□□ -0.08
USF1-203ENST00000368021 SLX4Q8IY92 1834 aa14.56□□□□□ -0.08
USF1-203ENST00000368021 TAF5LO75529 589 aa14.56□□□□□ -0.08
USF1-203ENST00000368021 UQCRFS1P1P0C7P4 283 aa14.56□□□□□ -0.08
USF1-203ENST00000368021 HOXA10P31260 410 aaPredicted RBP14.56□□□□□ -0.08
USF1-203ENST00000368021 RASSF7Q02833 373 aa14.56□□□□□ -0.08
USF1-203ENST00000368021 NBR1Q14596 966 aa14.56□□□□□ -0.08
USF1-203ENST00000368021 CWC27Q6UX04 472 aaKnown RBP14.56□□□□□ -0.08
USF1-203ENST00000368021 IL27Q8NEV9 243 aa14.56□□□□□ -0.08
USF1-203ENST00000368021 ANKRD2Q9GZV1 360 aa14.56□□□□□ -0.08
USF1-203ENST00000368021 AKAP11Q9UKA4 1901 aa14.56□□□□□ -0.08
USF1-203ENST00000368021 CACNA1SQ13698 1873 aa14.56□□□□□ -0.08
USF1-203ENST00000368021 CCDC102BQ68D86 513 aa14.55□□□□□ -0.08
USF1-203ENST00000368021 EDC3Q96F86 508 aaKnown RBP14.55□□□□□ -0.08
USF1-203ENST00000368021 IL25Q9H293 177 aa14.55□□□□□ -0.08
USF1-203ENST00000368021 DLEC1Q9Y238 1755 aa14.55□□□□□ -0.08
USF1-203ENST00000368021 GOLIM4O00461 696 aa14.55□□□□□ -0.08
USF1-203ENST00000368021 LRRFIP1Q32MZ4 808 aaKnown RBP14.55□□□□□ -0.08
USF1-203ENST00000368021 ANO2Q9NQ90 1003 aa14.55□□□□□ -0.08
USF1-203ENST00000368021 NDUFB9Q9Y6M9 179 aa14.55□□□□□ -0.08
USF1-203ENST00000368021 MCAMP43121 646 aa14.54□□□□□ -0.08
USF1-203ENST00000368021 C7orf43Q8WVR3 580 aa14.54□□□□□ -0.08
USF1-203ENST00000368021 CRAMP1Q96RY5 1269 aa14.54□□□□□ -0.08
USF1-203ENST00000368021 KIF2CQ99661 725 aa14.54□□□□□ -0.08
USF1-203ENST00000368021 PPEF1O14829 653 aaPredicted RBP14.53□□□□□ -0.08
USF1-203ENST00000368021 PHKA1P46020 1223 aa14.53□□□□□ -0.08
USF1-203ENST00000368021 FKBP4Q02790 459 aaKnown RBP eCLIP14.53□□□□□ -0.08
USF1-203ENST00000368021 NMIQ13287 307 aaPredicted RBP14.53□□□□□ -0.08
USF1-203ENST00000368021 SCARF1Q14162 830 aa14.53□□□□□ -0.08
USF1-203ENST00000368021 KIAA1211Q6ZU35 1233 aa14.53□□□□□ -0.08
USF1-203ENST00000368021 NFKBIEO00221 500 aa14.52□□□□□ -0.08
USF1-203ENST00000368021 MCCP23508 829 aa14.52□□□□□ -0.08
USF1-203ENST00000368021 TTF1Q15361 905 aaPredicted RBP14.52□□□□□ -0.08
USF1-203ENST00000368021 FAM227BQ96M60 508 aa14.52□□□□□ -0.08
USF1-203ENST00000368021 MED23Q9ULK4 1368 aa14.52□□□□□ -0.08
USF1-203ENST00000368021 ZNF804BA4D1E1 1349 aa14.52□□□□□ -0.08
USF1-203ENST00000368021 ARFGEF1Q9Y6D6 1849 aa14.52□□□□□ -0.08
USF1-203ENST00000368021 SNAP23O00161 211 aa14.52□□□□□ -0.09
USF1-203ENST00000368021 ZBTB22O15209 634 aa14.52□□□□□ -0.09
USF1-203ENST00000368021 BBOX1O75936 387 aa14.52□□□□□ -0.09
USF1-203ENST00000368021 ANAPC15P60006 121 aa14.52□□□□□ -0.09
USF1-203ENST00000368021 C9orf131Q5VYM1 1079 aa14.52□□□□□ -0.09
USF1-203ENST00000368021 TMC4Q7Z404 712 aa14.52□□□□□ -0.09
USF1-203ENST00000368021 IL17RAQ96F46 866 aa14.52□□□□□ -0.09
USF1-203ENST00000368021 LSG1Q9H089 658 aaKnown RBP14.52□□□□□ -0.09
USF1-203ENST00000368021 A0A0D9SFI3 127 aa14.51□□□□□ -0.09
USF1-203ENST00000368021 ZFYP08048 801 aaPredicted RBP14.51□□□□□ -0.09
USF1-203ENST00000368021 ZAP70P43403 619 aa14.51□□□□□ -0.09
USF1-203ENST00000368021 PRELPP51888 382 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms