RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 CADPSQ9ULU8 1353 aa6.88□□□□□ -1.31
VPS13B-203ENST00000358544 GOLGA8KD6RF30 607 aa6.87□□□□□ -1.31
VPS13B-203ENST00000358544 ZBTB22O15209 634 aa6.87□□□□□ -1.31
VPS13B-203ENST00000358544 ACTN2P35609 894 aa6.87□□□□□ -1.31
VPS13B-203ENST00000358544 UBXN1Q04323 297 aa6.87□□□□□ -1.31
VPS13B-203ENST00000358544 TADA2BQ86TJ2 420 aa6.87□□□□□ -1.31
VPS13B-203ENST00000358544 KRT86O43790 486 aa6.87□□□□□ -1.31
VPS13B-203ENST00000358544 ZBTB12Q9Y330 459 aaPredicted RBP6.87□□□□□ -1.31
VPS13B-203ENST00000358544 ZHX3Q9H4I2 956 aa6.87□□□□□ -1.31
VPS13B-203ENST00000358544 RALGAPBQ86X10 1494 aa6.87□□□□□ -1.31
VPS13B-203ENST00000358544 AK2P54819 239 aa6.87□□□□□ -1.31
VPS13B-203ENST00000358544 SMC6Q96SB8 1091 aa6.87□□□□□ -1.31
VPS13B-203ENST00000358544 MTMR7Q9Y216 660 aa6.87□□□□□ -1.31
VPS13B-203ENST00000358544 NOL3O60936 208 aaKnown RBP6.87□□□□□ -1.31
VPS13B-203ENST00000358544 VIMP08670 466 aaKnown RBP6.87□□□□□ -1.31
VPS13B-203ENST00000358544 PAK2Q13177 524 aa6.87□□□□□ -1.31
VPS13B-203ENST00000358544 MAP7Q14244 749 aa6.87□□□□□ -1.31
VPS13B-203ENST00000358544 IRAK4Q9NWZ3 460 aa6.87□□□□□ -1.31
VPS13B-203ENST00000358544 SH2D4BQ5SQS7 431 aa6.87□□□□□ -1.31
VPS13B-203ENST00000358544 INTS8Q75QN2 995 aaKnown RBP6.87□□□□□ -1.31
VPS13B-203ENST00000358544 CYP2C19P33261 490 aa6.87□□□□□ -1.31
VPS13B-203ENST00000358544 PRPF4BQ13523 1007 aaKnown RBP6.87□□□□□ -1.31
VPS13B-203ENST00000358544 TNNQ9UQP3 1299 aa6.87□□□□□ -1.31
VPS13B-203ENST00000358544 CDC25BP30305 580 aa6.87□□□□□ -1.31
VPS13B-203ENST00000358544 ETF1P62495 437 aaKnown RBP6.87□□□□□ -1.31
VPS13B-203ENST00000358544 LONRF3Q496Y0 759 aa6.87□□□□□ -1.31
VPS13B-203ENST00000358544 EID1Q9Y6B2 187 aa6.87□□□□□ -1.31
VPS13B-203ENST00000358544 CETN2P41208 172 aa6.87□□□□□ -1.31
VPS13B-203ENST00000358544 POLR3DP05423 398 aaPredicted RBP6.87□□□□□ -1.31
VPS13B-203ENST00000358544 DDX46Q7L014 1031 aaKnown RBP6.87□□□□□ -1.31
VPS13B-203ENST00000358544 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.87□□□□□ -1.31
VPS13B-203ENST00000358544 TCEANC2Q96MN5 208 aa6.87□□□□□ -1.31
VPS13B-203ENST00000358544 PYM1Q9BRP8 204 aaKnown RBP6.87□□□□□ -1.31
VPS13B-203ENST00000358544 TTC41PQ6P2S7 1318 aa6.87□□□□□ -1.31
VPS13B-203ENST00000358544 TRIM14Q14142 442 aa6.86□□□□□ -1.31
VPS13B-203ENST00000358544 TMEM132EQ6IEE7 984 aa6.86□□□□□ -1.31
VPS13B-203ENST00000358544 ANKRD44Q8N8A2 993 aa6.86□□□□□ -1.31
VPS13B-203ENST00000358544 DDX12PQ92771 950 aa6.86□□□□□ -1.31
VPS13B-203ENST00000358544 TACO1Q9BSH4 297 aaKnown RBP6.86□□□□□ -1.31
VPS13B-203ENST00000358544 PKP1Q13835 747 aa6.86□□□□□ -1.31
VPS13B-203ENST00000358544 CCDC174Q6PII3 467 aa6.86□□□□□ -1.31
VPS13B-203ENST00000358544 TBC1D31Q96DN5 1066 aa6.86□□□□□ -1.31
VPS13B-203ENST00000358544 SEC62Q99442 399 aaKnown RBP6.86□□□□□ -1.31
VPS13B-203ENST00000358544 PPP2R2CQ9Y2T4 447 aa6.86□□□□□ -1.31
VPS13B-203ENST00000358544 PTPRCP08575 1304 aa6.86□□□□□ -1.31
VPS13B-203ENST00000358544 PPP1R12BO60237 982 aaPredicted RBP6.86□□□□□ -1.31
VPS13B-203ENST00000358544 SATB1Q01826 763 aa6.86□□□□□ -1.31
VPS13B-203ENST00000358544 IFT20Q8IY31 132 aa6.86□□□□□ -1.31
VPS13B-203ENST00000358544 OTUD7AQ8TE49 926 aaPredicted RBP6.86□□□□□ -1.31
VPS13B-203ENST00000358544 PPP1R12CQ9BZL4 782 aa6.86□□□□□ -1.31
VPS13B-203ENST00000358544 MYL5Q02045 173 aa6.86□□□□□ -1.31
VPS13B-203ENST00000358544 GDAP1L1Q96MZ0 367 aa6.86□□□□□ -1.31
VPS13B-203ENST00000358544 SUFUQ9UMX1 484 aa6.86□□□□□ -1.31
VPS13B-203ENST00000358544 SLC12A7Q9Y666 1083 aa6.86□□□□□ -1.31
VPS13B-203ENST00000358544 AOX1Q06278 1338 aa6.86□□□□□ -1.31
VPS13B-203ENST00000358544 IDEP14735 1019 aa6.86□□□□□ -1.31
VPS13B-203ENST00000358544 TDRD7Q8NHU6 1098 aaKnown RBP6.86□□□□□ -1.31
VPS13B-203ENST00000358544 N4BP2L2Q92802 583 aaPredicted RBP6.86□□□□□ -1.31
VPS13B-203ENST00000358544 GEMIN8Q9NWZ8 242 aaKnown RBP6.86□□□□□ -1.31
VPS13B-203ENST00000358544 RAD21O60216 631 aa6.86□□□□□ -1.31
VPS13B-203ENST00000358544 ZMYM4Q5VZL5 1548 aa6.86□□□□□ -1.31
VPS13B-203ENST00000358544 E7EVH7 732 aa6.86□□□□□ -1.31
VPS13B-203ENST00000358544 NEK1Q96PY6 1258 aa6.86□□□□□ -1.31
VPS13B-203ENST00000358544 NKIRAS1Q9NYS0 192 aa6.86□□□□□ -1.31
VPS13B-203ENST00000358544 SYNJ1O43426 1573 aa6.86□□□□□ -1.31
VPS13B-203ENST00000358544 TRIM68Q6AZZ1 485 aa6.86□□□□□ -1.31
VPS13B-203ENST00000358544 RUFY4Q6ZNE9 571 aa6.86□□□□□ -1.31
VPS13B-203ENST00000358544 EIF3CLB5ME19 914 aaKnown RBP6.86□□□□□ -1.31
VPS13B-203ENST00000358544 CHMLP26374 656 aa6.86□□□□□ -1.31
VPS13B-203ENST00000358544 ZC3H6P61129 1189 aaKnown RBP6.86□□□□□ -1.31
VPS13B-203ENST00000358544 EIF3CQ99613 913 aaKnown RBP6.86□□□□□ -1.31
VPS13B-203ENST00000358544 GNL3LQ9NVN8 582 aaKnown RBP6.86□□□□□ -1.31
VPS13B-203ENST00000358544 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.86□□□□□ -1.31
VPS13B-203ENST00000358544 NOP2P46087 812 aaKnown RBP6.86□□□□□ -1.31
VPS13B-203ENST00000358544 MLECQ14165 292 aa6.86□□□□□ -1.31
VPS13B-203ENST00000358544 PLEKHA4Q9H4M7 779 aa6.86□□□□□ -1.31
VPS13B-203ENST00000358544 FAN1Q9Y2M0 1017 aa6.86□□□□□ -1.31
VPS13B-203ENST00000358544 BMP15O95972 392 aa6.86□□□□□ -1.31
VPS13B-203ENST00000358544 ATL3Q6DD88 541 aa6.86□□□□□ -1.31
VPS13B-203ENST00000358544 SULT6B1Q6IMI4 303 aa6.86□□□□□ -1.31
VPS13B-203ENST00000358544 FAM114A2Q9NRY5 505 aa6.86□□□□□ -1.31
VPS13B-203ENST00000358544 SMIM24O75264 130 aa6.85□□□□□ -1.31
VPS13B-203ENST00000358544 WWC2Q6AWC2 1192 aa6.85□□□□□ -1.31
VPS13B-203ENST00000358544 BRAPQ7Z569 592 aa6.85□□□□□ -1.31
VPS13B-203ENST00000358544 ANKRD24Q8TF21 1146 aa6.85□□□□□ -1.31
VPS13B-203ENST00000358544 SLC24A3Q9HC58 644 aa6.85□□□□□ -1.31
VPS13B-203ENST00000358544 ANAPC4Q9UJX5 808 aa6.85□□□□□ -1.31
VPS13B-203ENST00000358544 BLMP54132 1417 aaPredicted RBP6.85□□□□□ -1.31
VPS13B-203ENST00000358544 SELENOOQ9BVL4 669 aa6.85□□□□□ -1.31
VPS13B-203ENST00000358544 RBM8AQ9Y5S9 174 aaKnown RBP6.85□□□□□ -1.31
VPS13B-203ENST00000358544 MACROD2A1Z1Q3 448 aa6.85□□□□□ -1.31
VPS13B-203ENST00000358544 BOLA2Q9H3K6 86 aa6.85□□□□□ -1.31
VPS13B-203ENST00000358544 NUTM2FA1L443 756 aa6.85□□□□□ -1.31
VPS13B-203ENST00000358544 SSRP1Q08945 709 aaKnown RBP6.85□□□□□ -1.31
VPS13B-203ENST00000358544 KIF5AQ12840 1032 aa6.85□□□□□ -1.31
VPS13B-203ENST00000358544 ZKSCAN8Q15776 578 aaPredicted RBP6.85□□□□□ -1.31
VPS13B-203ENST00000358544 JARID2Q92833 1246 aaPredicted RBP6.85□□□□□ -1.31
VPS13B-203ENST00000358544 MCUR1Q96AQ8 359 aa6.85□□□□□ -1.31
VPS13B-203ENST00000358544 NSD2O96028 1365 aa6.85□□□□□ -1.31
VPS13B-203ENST00000358544 ATP2B2Q01814 1243 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms