RNA–Protein interactions for RNA: ENST00000344785.10

RBM38-202, Transcript of RNA binding motif protein 38, humanhuman

TSL 5

Gene RBM38, Length 2,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM38-202ENST00000344785 LINC00116Q8NCU8 138 aa22.07■■□□□ 1.12
RBM38-202ENST00000344785 TMEM63CQ9P1W3 806 aa22.07■■□□□ 1.12
RBM38-202ENST00000344785 RREB1Q92766 1687 aa22.07■■□□□ 1.12
RBM38-202ENST00000344785 AKAP11Q9UKA4 1901 aa22.07■■□□□ 1.12
RBM38-202ENST00000344785 KRT32Q14532 448 aa22.06■■□□□ 1.12
RBM38-202ENST00000344785 UTP14AQ9BVJ6 771 aaKnown RBP22.06■■□□□ 1.12
RBM38-202ENST00000344785 SPEF2Q9C093 1822 aa22.06■■□□□ 1.12
RBM38-202ENST00000344785 Q6ZUG5 572 aa22.06■■□□□ 1.12
RBM38-202ENST00000344785 PUS7LQ9H0K6 701 aaKnown RBP22.06■■□□□ 1.12
RBM38-202ENST00000344785 NIP7Q9Y221 180 aaKnown RBP eCLIP22.06■■□□□ 1.12
RBM38-202ENST00000344785 NTSR2O95665 410 aa22.05■■□□□ 1.12
RBM38-202ENST00000344785 PHKA1P46020 1223 aa22.05■■□□□ 1.12
RBM38-202ENST00000344785 VPS72Q15906 364 aa22.05■■□□□ 1.12
RBM38-202ENST00000344785 USP48Q86UV5 1035 aa22.05■■□□□ 1.12
RBM38-202ENST00000344785 TICAM2Q86XR7 235 aa22.05■■□□□ 1.12
RBM38-202ENST00000344785 F13A1P00488 732 aa22.05■■□□□ 1.12
RBM38-202ENST00000344785 CNPY2Q9Y2B0 182 aa22.05■■□□□ 1.12
RBM38-202ENST00000344785 FGFR2P21802 821 aa22.04■■□□□ 1.12
RBM38-202ENST00000344785 ANKRD1Q15327 319 aa22.04■■□□□ 1.12
RBM38-202ENST00000344785 FAM182BQ5T319 152 aa22.04■■□□□ 1.12
RBM38-202ENST00000344785 WASHC4Q2M389 1173 aa22.04■■□□□ 1.12
RBM38-202ENST00000344785 COL4A1P02462 1669 aa22.03■■□□□ 1.12
RBM38-202ENST00000344785 CCDC102BQ68D86 513 aa22.03■■□□□ 1.12
RBM38-202ENST00000344785 SMARCC1Q92922 1105 aaPredicted RBP22.03■■□□□ 1.12
RBM38-202ENST00000344785 RTN4Q9NQC3 1192 aaKnown RBP22.03■■□□□ 1.12
RBM38-202ENST00000344785 PIH1D3Q9NQM4 214 aaKnown RBP22.03■■□□□ 1.12
RBM38-202ENST00000344785 E7EWF7 191 aa22.02■■□□□ 1.12
RBM38-202ENST00000344785 ZNF445P59923 1031 aa22.02■■□□□ 1.12
RBM38-202ENST00000344785 BRF1Q92994 677 aa22.02■■□□□ 1.12
RBM38-202ENST00000344785 AK7Q96M32 723 aa22.02■■□□□ 1.12
RBM38-202ENST00000344785 ISY1Q9ULR0 285 aaKnown RBP22.02■■□□□ 1.12
RBM38-202ENST00000344785 LRP5O75197 1615 aa22.02■■□□□ 1.12
RBM38-202ENST00000344785 CICQ96RK0 1608 aaPredicted RBP22.02■■□□□ 1.12
RBM38-202ENST00000344785 LAMA4Q16363 1823 aa22.02■■□□□ 1.12
RBM38-202ENST00000344785 EXOSC10Q01780 885 aaKnown RBP22.01■■□□□ 1.11
RBM38-202ENST00000344785 FNBP4Q8N3X1 1017 aaPredicted RBP22.01■■□□□ 1.11
RBM38-202ENST00000344785 ZNF512BQ96KM6 892 aaPredicted RBP22.01■■□□□ 1.11
RBM38-202ENST00000344785 DDX60Q8IY21 1712 aaKnown RBP22.01■■□□□ 1.11
RBM38-202ENST00000344785 JAK2O60674 1132 aa22.01■■□□□ 1.11
RBM38-202ENST00000344785 PARP10Q53GL7 1025 aa22.01■■□□□ 1.11
RBM38-202ENST00000344785 C3orf67Q6ZVT6 689 aa22.01■■□□□ 1.11
RBM38-202ENST00000344785 CHST3Q7LGC8 479 aa22.01■■□□□ 1.11
RBM38-202ENST00000344785 MYO5AQ9Y4I1 1855 aaKnown RBP22■■□□□ 1.11
RBM38-202ENST00000344785 COL5A3P25940 1745 aaPredicted RBP22■■□□□ 1.11
RBM38-202ENST00000344785 DHX32Q7L7V1 743 aaKnown RBP22■■□□□ 1.11
RBM38-202ENST00000344785 ABCC12Q96J65 1359 aa22■■□□□ 1.11
RBM38-202ENST00000344785 VPS37CA5D8V6 355 aaPredicted RBP21.99■■□□□ 1.11
RBM38-202ENST00000344785 ZFYP08048 801 aaPredicted RBP21.99■■□□□ 1.11
RBM38-202ENST00000344785 PUM3Q15397 648 aaKnown RBP21.99■■□□□ 1.11
RBM38-202ENST00000344785 LARP1BQ659C4 914 aaKnown RBP21.99■■□□□ 1.11
RBM38-202ENST00000344785 APPBP2Q92624 585 aa21.99■■□□□ 1.11
RBM38-202ENST00000344785 GTF3C6Q969F1 213 aa21.99■■□□□ 1.11
RBM38-202ENST00000344785 FGAP02671 866 aa21.99■■□□□ 1.11
RBM38-202ENST00000344785 HAND2P61296 217 aa21.99■■□□□ 1.11
RBM38-202ENST00000344785 DNM1Q05193 864 aaKnown RBP21.99■■□□□ 1.11
RBM38-202ENST00000344785 CDC37L1Q7L3B6 337 aa21.99■■□□□ 1.11
RBM38-202ENST00000344785 LPIN2Q92539 896 aa21.99■■□□□ 1.11
RBM38-202ENST00000344785 MROH5Q6ZUA9 1318 aa21.99■■□□□ 1.11
RBM38-202ENST00000344785 ARID4AP29374 1257 aaPredicted RBP21.98■■□□□ 1.11
RBM38-202ENST00000344785 TMEM87AQ8NBN3 555 aa21.98■■□□□ 1.11
RBM38-202ENST00000344785 WTIPA6NIX2 430 aaPredicted RBP21.98■■□□□ 1.11
RBM38-202ENST00000344785 ADD2P35612 726 aa21.98■■□□□ 1.11
RBM38-202ENST00000344785 SCRN1Q12765 414 aa21.98■■□□□ 1.11
RBM38-202ENST00000344785 GPAA1O43292 621 aa21.97■■□□□ 1.11
RBM38-202ENST00000344785 APOBRQ0VD83 1088 aa21.97■■□□□ 1.11
RBM38-202ENST00000344785 SLC9C2Q5TAH2 1124 aa21.97■■□□□ 1.11
RBM38-202ENST00000344785 FAM173BQ6P4H8 233 aa21.97■■□□□ 1.11
RBM38-202ENST00000344785 FERMT3Q86UX7 667 aa21.97■■□□□ 1.11
RBM38-202ENST00000344785 MPHOSPH8Q99549 860 aa21.97■■□□□ 1.11
RBM38-202ENST00000344785 GPHNQ9NQX3 736 aaPredicted RBP21.97■■□□□ 1.11
RBM38-202ENST00000344785 MBD3O95983 291 aa21.97■■□□□ 1.11
RBM38-202ENST00000344785 ERFEQ4G0M1 354 aa21.97■■□□□ 1.11
RBM38-202ENST00000344785 BCL2L12Q9HB09 334 aa21.97■■□□□ 1.11
RBM38-202ENST00000344785 WWC3Q9ULE0 1092 aa21.97■■□□□ 1.11
RBM38-202ENST00000344785 SYCE3A1L190 88 aa21.96■■□□□ 1.11
RBM38-202ENST00000344785 CCDC152Q4G0S7 254 aa21.96■■□□□ 1.11
RBM38-202ENST00000344785 TPRNQ4KMQ1 711 aa21.96■■□□□ 1.11
RBM38-202ENST00000344785 AMIGO3Q86WK7 504 aa21.96■■□□□ 1.11
RBM38-202ENST00000344785 AGXT2Q9BYV1 514 aa21.96■■□□□ 1.11
RBM38-202ENST00000344785 USP21Q9UK80 565 aa21.96■■□□□ 1.11
RBM38-202ENST00000344785 FIBPO43427 364 aa21.95■■□□□ 1.1
RBM38-202ENST00000344785 IDH1O75874 414 aaKnown RBP21.95■■□□□ 1.1
RBM38-202ENST00000344785 HSP90B1P14625 803 aaKnown RBP21.95■■□□□ 1.1
RBM38-202ENST00000344785 RASGRF1Q13972 1273 aa21.95■■□□□ 1.1
RBM38-202ENST00000344785 NKX2-3Q8TAU0 364 aa21.95■■□□□ 1.1
RBM38-202ENST00000344785 RBSNQ9H1K0 784 aa21.95■■□□□ 1.1
RBM38-202ENST00000344785 HMGB1P09429 215 aaKnown RBP21.95■■□□□ 1.1
RBM38-202ENST00000344785 LRRFIP1Q32MZ4 808 aaKnown RBP21.95■■□□□ 1.1
RBM38-202ENST00000344785 MYH7P12883 1935 aa21.94■■□□□ 1.1
RBM38-202ENST00000344785 TCRBV5S4A2TA0A5A2 114 aa21.94■■□□□ 1.1
RBM38-202ENST00000344785 CTDNEP1O95476 244 aa21.94■■□□□ 1.1
RBM38-202ENST00000344785 CLEC4GQ6UXB4 293 aa21.94■■□□□ 1.1
RBM38-202ENST00000344785 BICDL1Q6ZP65 573 aa21.94■■□□□ 1.1
RBM38-202ENST00000344785 DENND2AQ9ULE3 1009 aa21.94■■□□□ 1.1
RBM38-202ENST00000344785 ZNF532Q9HCE3 1301 aa21.94■■□□□ 1.1
RBM38-202ENST00000344785 BCAMP50895 628 aa21.94■■□□□ 1.1
RBM38-202ENST00000344785 NBPF3Q9H094 633 aa21.94■■□□□ 1.1
RBM38-202ENST00000344785 EP400Q96L91 3159 aa21.94■■□□□ 1.1
RBM38-202ENST00000344785 PFKFB2O60825 505 aa21.93■■□□□ 1.1
RBM38-202ENST00000344785 PDE6AP16499 860 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms