RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 TSG101Q99816 390 aa19.76■□□□□ 0.75
GABRB3-202ENST00000311550 METTL22Q9BUU2 404 aaPredicted RBP19.76■□□□□ 0.75
GABRB3-202ENST00000311550 CNNM2Q9H8M5 875 aa19.76■□□□□ 0.75
GABRB3-202ENST00000311550 KCNQ3O43525 872 aa19.76■□□□□ 0.75
GABRB3-202ENST00000311550 BRD1O95696 1058 aa19.76■□□□□ 0.75
GABRB3-202ENST00000311550 ORAI2Q96SN7 254 aa19.76■□□□□ 0.75
GABRB3-202ENST00000311550 TMEM266Q2M3C6 531 aa19.76■□□□□ 0.75
GABRB3-202ENST00000311550 ZNF594Q96JF6 807 aaPredicted RBP19.76■□□□□ 0.75
GABRB3-202ENST00000311550 GOLGA6L9A6NEM1 432 aa19.75■□□□□ 0.75
GABRB3-202ENST00000311550 DHX58Q96C10 678 aa19.75■□□□□ 0.75
GABRB3-202ENST00000311550 A0A1B0GUL7 405 aa19.75■□□□□ 0.75
GABRB3-202ENST00000311550 EIF4A1P60842 406 aaKnown RBP19.75■□□□□ 0.75
GABRB3-202ENST00000311550 CDC37L1Q7L3B6 337 aa19.75■□□□□ 0.75
GABRB3-202ENST00000311550 EDC3Q96F86 508 aaKnown RBP19.75■□□□□ 0.75
GABRB3-202ENST00000311550 FAM89AQ96GI7 184 aa19.75■□□□□ 0.75
GABRB3-202ENST00000311550 HOXB7P09629 217 aa19.75■□□□□ 0.75
GABRB3-202ENST00000311550 GTF2F1P35269 517 aaKnown RBP eCLIP19.75■□□□□ 0.75
GABRB3-202ENST00000311550 IL17REQ8NFR9 667 aa19.75■□□□□ 0.75
GABRB3-202ENST00000311550 GAS2L3Q86XJ1 694 aa19.75■□□□□ 0.75
GABRB3-202ENST00000311550 ZMYND15Q9H091 742 aa19.75■□□□□ 0.75
GABRB3-202ENST00000311550 RNF216Q9NWF9 866 aaPredicted RBP19.75■□□□□ 0.75
GABRB3-202ENST00000311550 RAB34Q9BZG1 259 aa19.74■□□□□ 0.75
GABRB3-202ENST00000311550 MAGEB6Q8N7X4 407 aa19.74■□□□□ 0.75
GABRB3-202ENST00000311550 MYO5CQ9NQX4 1742 aa19.74■□□□□ 0.75
GABRB3-202ENST00000311550 OTUD7BQ6GQQ9 843 aa19.74■□□□□ 0.75
GABRB3-202ENST00000311550 KIF24Q5T7B8 1368 aa19.74■□□□□ 0.75
GABRB3-202ENST00000311550 IRS4O14654 1257 aaPredicted RBP19.74■□□□□ 0.75
GABRB3-202ENST00000311550 TRIM47Q96LD4 638 aa19.74■□□□□ 0.75
GABRB3-202ENST00000311550 IL2RBP14784 551 aa19.73■□□□□ 0.75
GABRB3-202ENST00000311550 BMS1Q14692 1282 aaKnown RBP19.73■□□□□ 0.75
GABRB3-202ENST00000311550 ZKSCAN3Q9BRR0 538 aa19.73■□□□□ 0.75
GABRB3-202ENST00000311550 CRNKL1Q9BZJ0 848 aaKnown RBP19.73■□□□□ 0.75
GABRB3-202ENST00000311550 KDM5DQ9BY66 1539 aa19.73■□□□□ 0.75
GABRB3-202ENST00000311550 USO1O60763 962 aaKnown RBP19.73■□□□□ 0.75
GABRB3-202ENST00000311550 LIG1P18858 919 aa19.73■□□□□ 0.75
GABRB3-202ENST00000311550 TAX1BP1Q86VP1 789 aa19.73■□□□□ 0.75
GABRB3-202ENST00000311550 TMTC2Q8N394 836 aa19.73■□□□□ 0.75
GABRB3-202ENST00000311550 RPGRQ92834 1020 aaKnown RBP19.73■□□□□ 0.75
GABRB3-202ENST00000311550 SIRT1Q96EB6 747 aa19.73■□□□□ 0.75
GABRB3-202ENST00000311550 PRDM15P57071 1507 aaPredicted RBP19.73■□□□□ 0.75
GABRB3-202ENST00000311550 JAK2O60674 1132 aa19.73■□□□□ 0.75
GABRB3-202ENST00000311550 HELLSQ9NRZ9 838 aa19.73■□□□□ 0.75
GABRB3-202ENST00000311550 C6orf229H3BNL8 230 aa19.72■□□□□ 0.75
GABRB3-202ENST00000311550 STX17P56962 302 aa19.72■□□□□ 0.75
GABRB3-202ENST00000311550 RDXP35241 583 aaKnown RBP19.72■□□□□ 0.75
GABRB3-202ENST00000311550 MAP9Q49MG5 647 aa19.72■□□□□ 0.75
GABRB3-202ENST00000311550 EYA2O00167 538 aa19.72■□□□□ 0.75
GABRB3-202ENST00000311550 ANKRD18AQ8IVF6 992 aa19.72■□□□□ 0.75
GABRB3-202ENST00000311550 CALML4Q96GE6 196 aa19.72■□□□□ 0.75
GABRB3-202ENST00000311550 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.72■□□□□ 0.75
GABRB3-202ENST00000311550 PPP1R1BQ9UD71 204 aaPredicted RBP19.72■□□□□ 0.75
GABRB3-202ENST00000311550 ARHGEF10O15013 1369 aa19.72■□□□□ 0.75
GABRB3-202ENST00000311550 PLEKHG3A1L390 1219 aa19.72■□□□□ 0.75
GABRB3-202ENST00000311550 ATP6V1AP38606 617 aa19.72■□□□□ 0.75
GABRB3-202ENST00000311550 DZIP3Q86Y13 1208 aaKnown RBP19.72■□□□□ 0.75
GABRB3-202ENST00000311550 NIP7Q9Y221 180 aaKnown RBP eCLIP19.72■□□□□ 0.75
GABRB3-202ENST00000311550 BCORL1Q5H9F3 1711 aa19.72■□□□□ 0.75
GABRB3-202ENST00000311550 TTC37Q6PGP7 1564 aa19.72■□□□□ 0.75
GABRB3-202ENST00000311550 FAM160A1Q05DH4 1040 aa19.71■□□□□ 0.75
GABRB3-202ENST00000311550 PTH1RQ03431 593 aa19.71■□□□□ 0.75
GABRB3-202ENST00000311550 NAA16Q6N069 864 aaPredicted RBP19.71■□□□□ 0.75
GABRB3-202ENST00000311550 SSH3Q8TE77 659 aa19.71■□□□□ 0.75
GABRB3-202ENST00000311550 LEO1Q8WVC0 666 aaPredicted RBP19.71■□□□□ 0.75
GABRB3-202ENST00000311550 KAT6BQ8WYB5 2073 aa19.71■□□□□ 0.75
GABRB3-202ENST00000311550 ZBTB9Q96C00 473 aa19.71■□□□□ 0.75
GABRB3-202ENST00000311550 C19orf44Q9H6X5 657 aa19.71■□□□□ 0.75
GABRB3-202ENST00000311550 SLU7O95391 586 aaKnown RBP19.71■□□□□ 0.75
GABRB3-202ENST00000311550 ME3Q16798 604 aa19.71■□□□□ 0.75
GABRB3-202ENST00000311550 BRAPQ7Z569 592 aa19.71■□□□□ 0.75
GABRB3-202ENST00000311550 TRIM75PA6NK02 468 aa19.7■□□□□ 0.74
GABRB3-202ENST00000311550 GCKRQ14397 625 aa19.7■□□□□ 0.74
GABRB3-202ENST00000311550 PLBD2Q8NHP8 589 aa19.7■□□□□ 0.74
GABRB3-202ENST00000311550 DHX37Q8IY37 1157 aaKnown RBP19.7■□□□□ 0.74
GABRB3-202ENST00000311550 FGFR1OPO95684 399 aaKnown RBP19.7■□□□□ 0.74
GABRB3-202ENST00000311550 BAG3O95817 575 aa19.7■□□□□ 0.74
GABRB3-202ENST00000311550 STAT6P42226 847 aa19.7■□□□□ 0.74
GABRB3-202ENST00000311550 PAFAH1B1P43034 410 aa19.7■□□□□ 0.74
GABRB3-202ENST00000311550 MATR3P43243 847 aaKnown RBP eCLIP19.7■□□□□ 0.74
GABRB3-202ENST00000311550 SYT10Q6XYQ8 523 aa19.7■□□□□ 0.74
GABRB3-202ENST00000311550 KRT222Q8N1A0 295 aa19.7■□□□□ 0.74
GABRB3-202ENST00000311550 CCDC40Q4G0X9 1142 aa19.7■□□□□ 0.74
GABRB3-202ENST00000311550 CBX8Q9HC52 389 aa19.7■□□□□ 0.74
GABRB3-202ENST00000311550 B4E1Z4 1266 aa19.69■□□□□ 0.74
GABRB3-202ENST00000311550 NBPF5PQ86XG9 351 aaPredicted RBP19.69■□□□□ 0.74
GABRB3-202ENST00000311550 GPT2Q8TD30 523 aa19.69■□□□□ 0.74
GABRB3-202ENST00000311550 CLSTN2Q9H4D0 955 aa19.69■□□□□ 0.74
GABRB3-202ENST00000311550 JADE2Q9NQC1 790 aa19.69■□□□□ 0.74
GABRB3-202ENST00000311550 TRIM21P19474 475 aaKnown RBP19.69■□□□□ 0.74
GABRB3-202ENST00000311550 PPP1R12BO60237 982 aaPredicted RBP19.69■□□□□ 0.74
GABRB3-202ENST00000311550 A1BGP04217 495 aa19.69■□□□□ 0.74
GABRB3-202ENST00000311550 AMPD3Q01432 767 aa19.69■□□□□ 0.74
GABRB3-202ENST00000311550 CCDC178Q5BJE1 867 aa19.68■□□□□ 0.74
GABRB3-202ENST00000311550 ZNF496Q96IT1 587 aaPredicted RBP19.68■□□□□ 0.74
GABRB3-202ENST00000311550 ANTXR1Q9H6X2 564 aa19.68■□□□□ 0.74
GABRB3-202ENST00000311550 MAGEB6P1A0A0J9YX57 407 aa19.68■□□□□ 0.74
GABRB3-202ENST00000311550 HEATR3Q7Z4Q2 680 aa19.68■□□□□ 0.74
GABRB3-202ENST00000311550 UNC5CLQ8IV45 518 aa19.68■□□□□ 0.74
GABRB3-202ENST00000311550 PYM1Q9BRP8 204 aaKnown RBP19.68■□□□□ 0.74
GABRB3-202ENST00000311550 IGSF3O75054 1194 aa19.68■□□□□ 0.74
GABRB3-202ENST00000311550 MBD4O95243 580 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms