RNA–Protein interactions for RNA: ENST00000311350.7

HERPUD2-201, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 2,474 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-201ENST00000311350 NR1I2O75469 434 aa22.15■■□□□ 1.14
HERPUD2-201ENST00000311350 AACSQ86V21 672 aa22.15■■□□□ 1.14
HERPUD2-201ENST00000311350 ADAMTS7Q9UKP4 1686 aa22.14■■□□□ 1.14
HERPUD2-201ENST00000311350 PTPN14Q15678 1187 aa22.14■■□□□ 1.13
HERPUD2-201ENST00000311350 EZH2Q15910 746 aaKnown RBP22.14■■□□□ 1.13
HERPUD2-201ENST00000311350 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.14■■□□□ 1.13
HERPUD2-201ENST00000311350 HMG20BQ9P0W2 317 aa22.14■■□□□ 1.13
HERPUD2-201ENST00000311350 SLC27A2O14975 620 aa22.14■■□□□ 1.13
HERPUD2-201ENST00000311350 DDX58O95786 925 aaKnown RBP22.14■■□□□ 1.13
HERPUD2-201ENST00000311350 CAMKK2Q96RR4 588 aa22.14■■□□□ 1.13
HERPUD2-201ENST00000311350 MED23Q9ULK4 1368 aa22.13■■□□□ 1.13
HERPUD2-201ENST00000311350 GRM8O00222 908 aa22.13■■□□□ 1.13
HERPUD2-201ENST00000311350 NYAP1Q6ZVC0 841 aa22.13■■□□□ 1.13
HERPUD2-201ENST00000311350 GTF3C6Q969F1 213 aa22.13■■□□□ 1.13
HERPUD2-201ENST00000311350 SYTL4Q96C24 671 aaPredicted RBP22.13■■□□□ 1.13
HERPUD2-201ENST00000311350 G3BP1Q13283 466 aaKnown RBP eCLIP22.13■■□□□ 1.13
HERPUD2-201ENST00000311350 C1orf141Q5JVX7 400 aa22.13■■□□□ 1.13
HERPUD2-201ENST00000311350 LRRN4CLQ8ND94 238 aa22.13■■□□□ 1.13
HERPUD2-201ENST00000311350 TPCN1Q9ULQ1 816 aa22.13■■□□□ 1.13
HERPUD2-201ENST00000311350 SIPA1L3O60292 1781 aaPredicted RBP22.12■■□□□ 1.13
HERPUD2-201ENST00000311350 A0A087WWV3 80 aa22.12■■□□□ 1.13
HERPUD2-201ENST00000311350 NMIQ13287 307 aaPredicted RBP22.12■■□□□ 1.13
HERPUD2-201ENST00000311350 RFX7Q2KHR2 1363 aa22.12■■□□□ 1.13
HERPUD2-201ENST00000311350 SASH1O94885 1247 aa22.12■■□□□ 1.13
HERPUD2-201ENST00000311350 ANXA1P04083 346 aa22.12■■□□□ 1.13
HERPUD2-201ENST00000311350 SKILP12757 684 aa22.12■■□□□ 1.13
HERPUD2-201ENST00000311350 PA2G4Q9UQ80 394 aaKnown RBP22.12■■□□□ 1.13
HERPUD2-201ENST00000311350 USP16Q9Y5T5 823 aa22.12■■□□□ 1.13
HERPUD2-201ENST00000311350 SRCAPQ6ZRS2 3230 aa22.11■■□□□ 1.13
HERPUD2-201ENST00000311350 GOLGA6L4A6NEF3 574 aa22.11■■□□□ 1.13
HERPUD2-201ENST00000311350 CLSTN2Q9H4D0 955 aa22.11■■□□□ 1.13
HERPUD2-201ENST00000311350 DDX21Q9NR30 783 aaKnown RBP eCLIP22.11■■□□□ 1.13
HERPUD2-201ENST00000311350 TULP2O00295 520 aa22.11■■□□□ 1.13
HERPUD2-201ENST00000311350 SUCLG2Q96I99 432 aa22.11■■□□□ 1.13
HERPUD2-201ENST00000311350 SCAND2PQ9GZW5 306 aaPredicted RBP22.11■■□□□ 1.13
HERPUD2-201ENST00000311350 RPS6KB1P23443 525 aa22.1■■□□□ 1.13
HERPUD2-201ENST00000311350 BLOC1S2Q6QNY1 142 aa22.1■■□□□ 1.13
HERPUD2-201ENST00000311350 MPRIPQ6WCQ1 1025 aa22.1■■□□□ 1.13
HERPUD2-201ENST00000311350 FILIP1Q7Z7B0 1213 aa22.1■■□□□ 1.13
HERPUD2-201ENST00000311350 ERO1AQ96HE7 468 aa22.1■■□□□ 1.13
HERPUD2-201ENST00000311350 SPATA32Q96LK8 384 aa22.1■■□□□ 1.13
HERPUD2-201ENST00000311350 TCEANC2Q96MN5 208 aa22.1■■□□□ 1.13
HERPUD2-201ENST00000311350 HNRNPH2P55795 449 aaKnown RBP22.09■■□□□ 1.13
HERPUD2-201ENST00000311350 EAF2Q96CJ1 260 aaPredicted RBP22.09■■□□□ 1.13
HERPUD2-201ENST00000311350 KAZALD1Q96I82 304 aa22.09■■□□□ 1.13
HERPUD2-201ENST00000311350 PGBD1Q96JS3 809 aa22.09■■□□□ 1.13
HERPUD2-201ENST00000311350 CALCOCO1Q9P1Z2 691 aa22.09■■□□□ 1.13
HERPUD2-201ENST00000311350 RBM43Q6ZSC3 357 aaKnown RBP22.09■■□□□ 1.13
HERPUD2-201ENST00000311350 C11orf57Q6ZUT1 292 aaPredicted RBP22.09■■□□□ 1.13
HERPUD2-201ENST00000311350 NOL10Q9BSC4 688 aaKnown RBP22.09■■□□□ 1.13
HERPUD2-201ENST00000311350 ERCC6LQ2NKX8 1250 aa22.08■■□□□ 1.13
HERPUD2-201ENST00000311350 PROSER3Q2NL68 480 aa22.08■■□□□ 1.13
HERPUD2-201ENST00000311350 LEO1Q8WVC0 666 aaPredicted RBP22.08■■□□□ 1.13
HERPUD2-201ENST00000311350 FAM227BQ96M60 508 aa22.08■■□□□ 1.13
HERPUD2-201ENST00000311350 RGPD2P0DJD1 1756 aa22.08■■□□□ 1.13
HERPUD2-201ENST00000311350 KRT32Q14532 448 aa22.08■■□□□ 1.13
HERPUD2-201ENST00000311350 PTF1AQ7RTS3 328 aa22.08■■□□□ 1.13
HERPUD2-201ENST00000311350 DDX19AQ9NUU7 478 aaKnown RBP22.08■■□□□ 1.13
HERPUD2-201ENST00000311350 CCDC69A6NI79 296 aa22.07■■□□□ 1.12
HERPUD2-201ENST00000311350 SLU7O95391 586 aaKnown RBP22.07■■□□□ 1.12
HERPUD2-201ENST00000311350 CCZ1BP86790 482 aa22.07■■□□□ 1.12
HERPUD2-201ENST00000311350 CCZ1P86791 482 aaPredicted RBP22.07■■□□□ 1.12
HERPUD2-201ENST00000311350 USPL1Q5W0Q7 1092 aa22.07■■□□□ 1.12
HERPUD2-201ENST00000311350 BICC1Q9H694 974 aaKnown RBP22.07■■□□□ 1.12
HERPUD2-201ENST00000311350 CWF19L2Q2TBE0 894 aaKnown RBP22.07■■□□□ 1.12
HERPUD2-201ENST00000311350 BICD2Q8TD16 824 aa22.07■■□□□ 1.12
HERPUD2-201ENST00000311350 CYP2C19P33261 490 aa22.06■■□□□ 1.12
HERPUD2-201ENST00000311350 IQCB1Q15051 598 aa22.06■■□□□ 1.12
HERPUD2-201ENST00000311350 DNAJC2Q99543 621 aaKnown RBP22.06■■□□□ 1.12
HERPUD2-201ENST00000311350 MEGF6O75095 1541 aa22.06■■□□□ 1.12
HERPUD2-201ENST00000311350 COL15A1P39059 1388 aa22.06■■□□□ 1.12
HERPUD2-201ENST00000311350 CCAR2Q8N163 923 aaKnown RBP22.06■■□□□ 1.12
HERPUD2-201ENST00000311350 FHOD1Q9Y613 1164 aa22.06■■□□□ 1.12
HERPUD2-201ENST00000311350 SBF2Q86WG5 1849 aa22.06■■□□□ 1.12
HERPUD2-201ENST00000311350 TRIM34Q9BYJ4 488 aa22.05■■□□□ 1.12
HERPUD2-201ENST00000311350 A0A0D9SFI3 127 aa22.05■■□□□ 1.12
HERPUD2-201ENST00000311350 PLSCR1O15162 318 aa22.05■■□□□ 1.12
HERPUD2-201ENST00000311350 CDC25BP30305 580 aa22.05■■□□□ 1.12
HERPUD2-201ENST00000311350 RAPGEF4Q8WZA2 1011 aa22.05■■□□□ 1.12
HERPUD2-201ENST00000311350 FSD1Q9BTV5 496 aa22.05■■□□□ 1.12
HERPUD2-201ENST00000311350 TOB2Q14106 344 aaPredicted RBP22.04■■□□□ 1.12
HERPUD2-201ENST00000311350 ZCRB1Q8TBF4 217 aaKnown RBP22.04■■□□□ 1.12
HERPUD2-201ENST00000311350 GOLGA6L19H0YKK7 550 aa22.03■■□□□ 1.12
HERPUD2-201ENST00000311350 KCNQ2O43526 872 aa22.03■■□□□ 1.12
HERPUD2-201ENST00000311350 CAVIN2O95810 425 aa22.03■■□□□ 1.12
HERPUD2-201ENST00000311350 STK3Q13188 491 aa22.03■■□□□ 1.12
HERPUD2-201ENST00000311350 PDIA6Q15084 440 aa22.03■■□□□ 1.12
HERPUD2-201ENST00000311350 SLFNL1Q499Z3 407 aa22.03■■□□□ 1.12
HERPUD2-201ENST00000311350 ACSBG1Q96GR2 724 aa22.03■■□□□ 1.12
HERPUD2-201ENST00000311350 PSDA5PKW4 1024 aaPredicted RBP22.03■■□□□ 1.12
HERPUD2-201ENST00000311350 CLCN6P51797 869 aa22.03■■□□□ 1.12
HERPUD2-201ENST00000311350 CCDC8Q9H0W5 538 aaPredicted RBP22.03■■□□□ 1.12
HERPUD2-201ENST00000311350 H2AFXP16104 143 aaPredicted RBP22.02■■□□□ 1.12
HERPUD2-201ENST00000311350 PLA2G4AP47712 749 aa22.02■■□□□ 1.12
HERPUD2-201ENST00000311350 TICAM2Q86XR7 235 aa22.02■■□□□ 1.12
HERPUD2-201ENST00000311350 DDX11Q96FC9 970 aa22.02■■□□□ 1.12
HERPUD2-201ENST00000311350 TAF5LO75529 589 aa22.02■■□□□ 1.12
HERPUD2-201ENST00000311350 ATP5JP18859 108 aa22.02■■□□□ 1.12
HERPUD2-201ENST00000311350 SLC20A2Q08357 652 aa22.02■■□□□ 1.12
HERPUD2-201ENST00000311350 BMS1Q14692 1282 aaKnown RBP22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms