RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 SLFNL1Q499Z3 407 aa12.95□□□□□ -0.34
PTPN7-201ENST00000309017 PDILTQ8N807 584 aa12.95□□□□□ -0.34
PTPN7-201ENST00000309017 XAGE3Q8WTP9 111 aa12.95□□□□□ -0.34
PTPN7-201ENST00000309017 RBM33Q96EV2 1170 aaKnown RBP12.95□□□□□ -0.34
PTPN7-201ENST00000309017 KAZALD1Q96I82 304 aa12.95□□□□□ -0.34
PTPN7-201ENST00000309017 IMPACTQ9P2X3 320 aa12.95□□□□□ -0.34
PTPN7-201ENST00000309017 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.95□□□□□ -0.342e-6■■■■□ 20.8
PTPN7-201ENST00000309017 TSGA10IPQ3SY00 556 aa12.94□□□□□ -0.34
PTPN7-201ENST00000309017 IP6K1Q92551 441 aa12.94□□□□□ -0.34
PTPN7-201ENST00000309017 KIAA1468Q9P260 1216 aa12.94□□□□□ -0.34
PTPN7-201ENST00000309017 ADGRL3Q9HAR2 1447 aa12.94□□□□□ -0.34
PTPN7-201ENST00000309017 ATP5JP18859 108 aa12.94□□□□□ -0.34
PTPN7-201ENST00000309017 CLCN6P51797 869 aa12.94□□□□□ -0.34
PTPN7-201ENST00000309017 E4F1Q66K89 784 aaPredicted RBP12.94□□□□□ -0.34
PTPN7-201ENST00000309017 COPS6Q7L5N1 327 aa12.94□□□□□ -0.34
PTPN7-201ENST00000309017 DDX21Q9NR30 783 aaKnown RBP eCLIP12.94□□□□□ -0.34
PTPN7-201ENST00000309017 RGPD1P0DJD0 1748 aa12.94□□□□□ -0.34
PTPN7-201ENST00000309017 CACNA1FO60840 1977 aa12.94□□□□□ -0.34
PTPN7-201ENST00000309017 VGLL3A8MV65 326 aa12.94□□□□□ -0.34
PTPN7-201ENST00000309017 ATP5J2-PTCD1G3V325 749 aa12.94□□□□□ -0.34
PTPN7-201ENST00000309017 PTCD1O75127 700 aaKnown RBP12.94□□□□□ -0.34
PTPN7-201ENST00000309017 EPHA10Q5JZY3 1008 aa12.94□□□□□ -0.34
PTPN7-201ENST00000309017 NRXN3Q9Y4C0 1643 aa12.93□□□□□ -0.34
PTPN7-201ENST00000309017 CCP110O43303 1012 aa12.93□□□□□ -0.34
PTPN7-201ENST00000309017 HAND2P61296 217 aa12.93□□□□□ -0.34
PTPN7-201ENST00000309017 AMOTQ4VCS5 1084 aa12.93□□□□□ -0.34
PTPN7-201ENST00000309017 HSP90AA4PQ58FG1 418 aa12.93□□□□□ -0.34
PTPN7-201ENST00000309017 STOX1Q6ZVD7 989 aa12.93□□□□□ -0.34
PTPN7-201ENST00000309017 LRRN4CLQ8ND94 238 aa12.93□□□□□ -0.34
PTPN7-201ENST00000309017 CHMP4CQ96CF2 233 aa12.93□□□□□ -0.34
PTPN7-201ENST00000309017 SETD1AO15047 1707 aaKnown RBP12.93□□□□□ -0.34
PTPN7-201ENST00000309017 SPTLC2O15270 562 aa12.93□□□□□ -0.34
PTPN7-201ENST00000309017 MARCKSP29966 332 aaPredicted RBP12.93□□□□□ -0.34
PTPN7-201ENST00000309017 WASHC4Q2M389 1173 aa12.93□□□□□ -0.34
PTPN7-201ENST00000309017 SMARCC2Q8TAQ2 1214 aa12.93□□□□□ -0.34
PTPN7-201ENST00000309017 UTP14AQ9BVJ6 771 aaKnown RBP12.93□□□□□ -0.34
PTPN7-201ENST00000309017 CEMIPQ8WUJ3 1361 aa12.93□□□□□ -0.34
PTPN7-201ENST00000309017 ADD1P35611 737 aaKnown RBP12.92□□□□□ -0.34
PTPN7-201ENST00000309017 UBASH3AP57075 661 aa12.92□□□□□ -0.34
PTPN7-201ENST00000309017 PTPN21Q16825 1174 aa12.92□□□□□ -0.34
PTPN7-201ENST00000309017 ATL3Q6DD88 541 aa12.92□□□□□ -0.34
PTPN7-201ENST00000309017 ADALQ6DHV7 355 aa12.92□□□□□ -0.34
PTPN7-201ENST00000309017 ARMCX5Q6P1M9 558 aa12.92□□□□□ -0.34
PTPN7-201ENST00000309017 ADAMTS13Q76LX8 1427 aa12.92□□□□□ -0.34
PTPN7-201ENST00000309017 IGKV5-2P06315 115 aa12.92□□□□□ -0.34
PTPN7-201ENST00000309017 FANCCQ00597 558 aa12.92□□□□□ -0.34
PTPN7-201ENST00000309017 GCKRQ14397 625 aa12.92□□□□□ -0.34
PTPN7-201ENST00000309017 USPL1Q5W0Q7 1092 aa12.92□□□□□ -0.34
PTPN7-201ENST00000309017 KCNG4Q8TDN1 519 aa12.92□□□□□ -0.34
PTPN7-201ENST00000309017 CARD6Q9BX69 1037 aa12.92□□□□□ -0.34
PTPN7-201ENST00000309017 ORC3Q9UBD5 711 aaPredicted RBP12.92□□□□□ -0.34
PTPN7-201ENST00000309017 CLIC4Q9Y696 253 aa12.92□□□□□ -0.34
PTPN7-201ENST00000309017 NEURL1BA8MQ27 555 aa12.92□□□□□ -0.34
PTPN7-201ENST00000309017 ENGASEQ8NFI3 743 aa12.92□□□□□ -0.34
PTPN7-201ENST00000309017 OSBPL5Q9H0X9 879 aaPredicted RBP12.92□□□□□ -0.34
PTPN7-201ENST00000309017 PTPRUQ92729 1446 aa12.91□□□□□ -0.34
PTPN7-201ENST00000309017 A0A087WZG4 1122 aa12.91□□□□□ -0.34
PTPN7-201ENST00000309017 ZNF202O95125 648 aa12.91□□□□□ -0.34
PTPN7-201ENST00000309017 CTDNEP1O95476 244 aa12.91□□□□□ -0.34
PTPN7-201ENST00000309017 TOP1P11387 765 aaKnown RBP12.91□□□□□ -0.34
PTPN7-201ENST00000309017 ETF1P62495 437 aaKnown RBP12.91□□□□□ -0.34
PTPN7-201ENST00000309017 FMR1NBQ8N0W7 255 aaPredicted RBP12.91□□□□□ -0.34
PTPN7-201ENST00000309017 SNRKQ9NRH2 765 aa12.91□□□□□ -0.34
PTPN7-201ENST00000309017 PHF8Q9UPP1 1060 aa12.91□□□□□ -0.34
PTPN7-201ENST00000309017 PSDA5PKW4 1024 aaPredicted RBP12.91□□□□□ -0.34
PTPN7-201ENST00000309017 GOLGA8BA8MQT2 603 aa12.91□□□□□ -0.34
PTPN7-201ENST00000309017 GOLGA8FQ08AF8 430 aa12.91□□□□□ -0.34
PTPN7-201ENST00000309017 GOLGA8DPQ0D2H9 430 aa12.91□□□□□ -0.34
PTPN7-201ENST00000309017 OLFM4Q6UX06 510 aa12.91□□□□□ -0.34
PTPN7-201ENST00000309017 NBPF11Q86T75 865 aa12.91□□□□□ -0.34
PTPN7-201ENST00000309017 ZNF446Q9NWS9 450 aa12.91□□□□□ -0.34
PTPN7-201ENST00000309017 E7EWF7 191 aa12.91□□□□□ -0.34
PTPN7-201ENST00000309017 PNMA6AP0CW24 399 aaPredicted RBP12.91□□□□□ -0.34
PTPN7-201ENST00000309017 FKBP4Q02790 459 aaKnown RBP eCLIP12.91□□□□□ -0.34
PTPN7-201ENST00000309017 DHX8Q14562 1220 aaKnown RBP12.91□□□□□ -0.34
PTPN7-201ENST00000309017 ESCO1Q5FWF5 840 aa12.91□□□□□ -0.34
PTPN7-201ENST00000309017 RALYLQ86SE5 291 aaKnown RBP12.91□□□□□ -0.34
PTPN7-201ENST00000309017 KBTBD3Q8NAB2 608 aa12.91□□□□□ -0.34
PTPN7-201ENST00000309017 ZBTB9Q96C00 473 aa12.91□□□□□ -0.34
PTPN7-201ENST00000309017 DHX16O60231 1041 aaKnown RBP12.9□□□□□ -0.34
PTPN7-201ENST00000309017 PDIA3P30101 505 aaKnown RBP12.9□□□□□ -0.34
PTPN7-201ENST00000309017 GPS2Q13227 327 aa12.9□□□□□ -0.34
PTPN7-201ENST00000309017 CCDC34Q96HJ3 373 aa12.9□□□□□ -0.34
PTPN7-201ENST00000309017 PAG1Q9NWQ8 432 aa12.9□□□□□ -0.34
PTPN7-201ENST00000309017 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.9□□□□□ -0.34
PTPN7-201ENST00000309017 ZNF609O15014 1411 aa12.9□□□□□ -0.34
PTPN7-201ENST00000309017 CBFA2T2O43439 604 aa12.9□□□□□ -0.34
PTPN7-201ENST00000309017 SEC31AO94979 1220 aaKnown RBP12.9□□□□□ -0.34
PTPN7-201ENST00000309017 ATP1A3P13637 1013 aa12.9□□□□□ -0.34
PTPN7-201ENST00000309017 ANKRD13DQ6ZTN6 518 aa12.9□□□□□ -0.34
PTPN7-201ENST00000309017 CARMIL3Q8ND23 1372 aa12.9□□□□□ -0.34
PTPN7-201ENST00000309017 KLF18A0A0U1RQI7 1052 aa12.9□□□□□ -0.35
PTPN7-201ENST00000309017 EVCP57679 992 aa12.9□□□□□ -0.35
PTPN7-201ENST00000309017 GNG11P61952 73 aa12.9□□□□□ -0.35
PTPN7-201ENST00000309017 TIMM10P62072 90 aa12.9□□□□□ -0.35
PTPN7-201ENST00000309017 TTLL5Q6EMB2 1281 aa12.9□□□□□ -0.35
PTPN7-201ENST00000309017 GPHNQ9NQX3 736 aaPredicted RBP12.9□□□□□ -0.35
PTPN7-201ENST00000309017 GJB4Q9NTQ9 266 aa12.9□□□□□ -0.35
PTPN7-201ENST00000309017 A0A0G2JLW4 131 aa12.89□□□□□ -0.35
PTPN7-201ENST00000309017 NLRP12P59046 1061 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms