RNA–Protein interactions for RNA: ENST00000301480.4

ZNF560-201, Transcript of zinc finger protein 560, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF560, Length 2,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560-201ENST00000301480 CDC37L1Q7L3B6 337 aa5.54□□□□□ -1.52
ZNF560-201ENST00000301480 DZIP3Q86Y13 1208 aaKnown RBP5.54□□□□□ -1.52
ZNF560-201ENST00000301480 COL23A1Q86Y22 540 aaPredicted RBP5.54□□□□□ -1.52
ZNF560-201ENST00000301480 NLGN1Q8N2Q7 840 aa5.54□□□□□ -1.52
ZNF560-201ENST00000301480 PDILTQ8N807 584 aa5.54□□□□□ -1.52
ZNF560-201ENST00000301480 UHMK1Q8TAS1 419 aaKnown RBP5.54□□□□□ -1.52
ZNF560-201ENST00000301480 DUSP9Q99956 384 aaKnown RBP5.54□□□□□ -1.52
ZNF560-201ENST00000301480 SENP7Q9BQF6 1050 aa5.54□□□□□ -1.52
ZNF560-201ENST00000301480 NOL10Q9BSC4 688 aaKnown RBP5.54□□□□□ -1.52
ZNF560-201ENST00000301480 CARD14Q9BXL6 1004 aa5.54□□□□□ -1.52
ZNF560-201ENST00000301480 RETREG1Q9H6L5 497 aa5.54□□□□□ -1.52
ZNF560-201ENST00000301480 SERPINA10Q9UK55 444 aa5.54□□□□□ -1.52
ZNF560-201ENST00000301480 CNTNAP4Q9C0A0 1308 aa5.54□□□□□ -1.52
ZNF560-201ENST00000301480 CICQ96RK0 1608 aaPredicted RBP5.54□□□□□ -1.52
ZNF560-201ENST00000301480 KIF1CO43896 1103 aaKnown RBP5.54□□□□□ -1.52
ZNF560-201ENST00000301480 PHKG2P15735 406 aa5.54□□□□□ -1.52
ZNF560-201ENST00000301480 FLIIQ13045 1269 aa5.54□□□□□ -1.52
ZNF560-201ENST00000301480 PSMD2Q13200 908 aa5.54□□□□□ -1.52
ZNF560-201ENST00000301480 CDC37Q16543 378 aaPredicted RBP5.54□□□□□ -1.52
ZNF560-201ENST00000301480 CFAP53Q96M91 514 aa5.54□□□□□ -1.52
ZNF560-201ENST00000301480 POLKQ9UBT6 870 aa5.54□□□□□ -1.52
ZNF560-201ENST00000301480 NPC1L1Q9UHC9 1359 aa5.54□□□□□ -1.52
ZNF560-201ENST00000301480 hCG_2014768A0A024R1R8 64 aa5.53□□□□□ -1.52
ZNF560-201ENST00000301480 LOC102724428A0A0B4J2F2 783 aa5.53□□□□□ -1.52
ZNF560-201ENST00000301480 HOXA2O43364 376 aa5.53□□□□□ -1.52
ZNF560-201ENST00000301480 PEX19P40855 299 aa5.53□□□□□ -1.52
ZNF560-201ENST00000301480 SIK1P57059 783 aa5.53□□□□□ -1.52
ZNF560-201ENST00000301480 INHBEP58166 350 aa5.53□□□□□ -1.52
ZNF560-201ENST00000301480 C1QTNF8P60827 252 aa5.53□□□□□ -1.52
ZNF560-201ENST00000301480 LARP1BQ659C4 914 aaKnown RBP5.53□□□□□ -1.52
ZNF560-201ENST00000301480 JMYQ8N9B5 988 aa5.53□□□□□ -1.52
ZNF560-201ENST00000301480 SPACA7Q96KW9 195 aa5.53□□□□□ -1.52
ZNF560-201ENST00000301480 PDGFDQ9GZP0 370 aaPredicted RBP5.53□□□□□ -1.52
ZNF560-201ENST00000301480 C4BP0C0L5 1744 aa5.53□□□□□ -1.52
ZNF560-201ENST00000301480 KDRP35968 1356 aa5.53□□□□□ -1.52
ZNF560-201ENST00000301480 GIGYF1O75420 1035 aaPredicted RBP5.53□□□□□ -1.52
ZNF560-201ENST00000301480 KCNA2P16389 499 aa5.53□□□□□ -1.52
ZNF560-201ENST00000301480 RRM1P23921 792 aa5.53□□□□□ -1.52
ZNF560-201ENST00000301480 TBX4P57082 545 aa5.53□□□□□ -1.52
ZNF560-201ENST00000301480 L1TD1Q5T7N2 865 aaKnown RBP5.53□□□□□ -1.52
ZNF560-201ENST00000301480 EYA1Q99502 592 aa5.53□□□□□ -1.52
ZNF560-201ENST00000301480 ESPNB1AK53 854 aa5.52□□□□□ -1.53
ZNF560-201ENST00000301480 TIMM44O43615 452 aa5.52□□□□□ -1.53
ZNF560-201ENST00000301480 GTF2A1P52655 376 aaPredicted RBP5.52□□□□□ -1.53
ZNF560-201ENST00000301480 EIF5P55010 431 aaKnown RBP5.52□□□□□ -1.53
ZNF560-201ENST00000301480 KLHL23Q8NBE8 558 aa5.52□□□□□ -1.53
ZNF560-201ENST00000301480 PNISRQ8TF01 805 aaKnown RBP5.52□□□□□ -1.53
ZNF560-201ENST00000301480 PIGBQ92521 554 aa5.52□□□□□ -1.53
ZNF560-201ENST00000301480 ZNF512BQ96KM6 892 aaPredicted RBP5.52□□□□□ -1.53
ZNF560-201ENST00000301480 ADCY9O60503 1353 aa5.52□□□□□ -1.53
ZNF560-201ENST00000301480 ATMINO43313 823 aaPredicted RBP5.52□□□□□ -1.53
ZNF560-201ENST00000301480 VDRP11473 427 aa5.52□□□□□ -1.53
ZNF560-201ENST00000301480 RIPK4P57078 832 aa5.52□□□□□ -1.53
ZNF560-201ENST00000301480 C11orf91Q3C1V1 193 aa5.52□□□□□ -1.53
ZNF560-201ENST00000301480 MPRIPQ6WCQ1 1025 aa5.52□□□□□ -1.53
ZNF560-201ENST00000301480 ZSCAN30Q86W11 494 aa5.52□□□□□ -1.53
ZNF560-201ENST00000301480 TNPO1Q92973 898 aaKnown RBP5.52□□□□□ -1.53
ZNF560-201ENST00000301480 CCDC47Q96A33 483 aaKnown RBP5.52□□□□□ -1.53
ZNF560-201ENST00000301480 PHF12Q96QT6 1004 aa5.52□□□□□ -1.53
ZNF560-201ENST00000301480 SLX1AQ9BQ83 275 aa5.52□□□□□ -1.53
ZNF560-201ENST00000301480 TSPYL1Q9H0U9 437 aa5.52□□□□□ -1.53
ZNF560-201ENST00000301480 CHCHD3Q9NX63 227 aaKnown RBP5.52□□□□□ -1.53
ZNF560-201ENST00000301480 RTCBQ9Y3I0 505 aaKnown RBP5.52□□□□□ -1.53
ZNF560-201ENST00000301480 DYTNA2CJ06 578 aa5.51□□□□□ -1.53
ZNF560-201ENST00000301480 TULP2O00295 520 aa5.51□□□□□ -1.53
ZNF560-201ENST00000301480 RPS6KA4O75676 772 aa5.51□□□□□ -1.53
ZNF560-201ENST00000301480 OATP04181 439 aa5.51□□□□□ -1.53
ZNF560-201ENST00000301480 EIF4A2Q14240 407 aaKnown RBP5.51□□□□□ -1.53
ZNF560-201ENST00000301480 NAALADL2Q58DX5 795 aa5.51□□□□□ -1.53
ZNF560-201ENST00000301480 TRAPPC3LQ5T215 181 aa5.51□□□□□ -1.53
ZNF560-201ENST00000301480 IQCF2Q8IXL9 164 aa5.51□□□□□ -1.53
ZNF560-201ENST00000301480 MED4Q9NPJ6 270 aa5.51□□□□□ -1.53
ZNF560-201ENST00000301480 EMILIN1Q9Y6C2 1016 aa5.51□□□□□ -1.53
ZNF560-201ENST00000301480 DDX49Q9Y6V7 483 aaKnown RBP5.51□□□□□ -1.53
ZNF560-201ENST00000301480 TAF1LQ8IZX4 1826 aa5.51□□□□□ -1.53
ZNF560-201ENST00000301480 MAP2P11137 1827 aaKnown RBP5.51□□□□□ -1.53
ZNF560-201ENST00000301480 TUBGCP6Q96RT7 1819 aa5.51□□□□□ -1.53
ZNF560-201ENST00000301480 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.51□□□□□ -1.53
ZNF560-201ENST00000301480 PTPROQ16827 1216 aa5.51□□□□□ -1.53
ZNF560-201ENST00000301480 C1orf141Q5JVX7 400 aa5.51□□□□□ -1.53
ZNF560-201ENST00000301480 MORC1Q86VD1 984 aa5.51□□□□□ -1.53
ZNF560-201ENST00000301480 CLASRPQ8N2M8 674 aaKnown RBP5.51□□□□□ -1.53
ZNF560-201ENST00000301480 ERCC4Q92889 916 aaPredicted RBP5.51□□□□□ -1.53
ZNF560-201ENST00000301480 SCYL1Q96KG9 808 aa5.51□□□□□ -1.53
ZNF560-201ENST00000301480 CDC5LQ99459 802 aaKnown RBP5.51□□□□□ -1.53
ZNF560-201ENST00000301480 GOPCQ9HD26 462 aa5.51□□□□□ -1.53
ZNF560-201ENST00000301480 CCDC87Q9NVE4 849 aa5.51□□□□□ -1.53
ZNF560-201ENST00000301480 C10orf71Q711Q0 1435 aa5.51□□□□□ -1.53
ZNF560-201ENST00000301480 GTPBP6O43824 516 aaPredicted RBP5.51□□□□□ -1.53
ZNF560-201ENST00000301480 ATG3Q9NT62 314 aa5.51□□□□□ -1.53
ZNF560-201ENST00000301480 SUFUQ9UMX1 484 aa5.51□□□□□ -1.53
ZNF560-201ENST00000301480 KNSTRNQ9Y448 316 aa5.51□□□□□ -1.53
ZNF560-201ENST00000301480 RGPD2P0DJD1 1756 aa5.5□□□□□ -1.53
ZNF560-201ENST00000301480 ATP6V1AP38606 617 aa5.5□□□□□ -1.53
ZNF560-201ENST00000301480 TRPC1P48995 793 aa5.5□□□□□ -1.53
ZNF560-201ENST00000301480 RASSF7Q02833 373 aa5.5□□□□□ -1.53
ZNF560-201ENST00000301480 RASA3Q14644 834 aa5.5□□□□□ -1.53
ZNF560-201ENST00000301480 ZNF394Q53GI3 561 aa5.5□□□□□ -1.53
ZNF560-201ENST00000301480 AKAP4Q5JQC9 854 aa5.5□□□□□ -1.53
ZNF560-201ENST00000301480 SWT1Q5T5J6 900 aaKnown RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms