RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 U3KPZ7 1027 aaPredicted RBP17.01■□□□□ 0.31
COL6A2-201ENST00000300527 DPF2Q92785 391 aa17.01■□□□□ 0.31
COL6A2-201ENST00000300527 MYD88Q99836 296 aa17.01■□□□□ 0.31
COL6A2-201ENST00000300527 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.01■□□□□ 0.31
COL6A2-201ENST00000300527 PREX1Q8TCU6 1659 aa17.01■□□□□ 0.31
COL6A2-201ENST00000300527 KARSQ15046 597 aaKnown RBP17■□□□□ 0.31
COL6A2-201ENST00000300527 CCDC191Q8NCU4 936 aa17■□□□□ 0.31
COL6A2-201ENST00000300527 DBNLQ9UJU6 430 aaKnown RBP17■□□□□ 0.31
COL6A2-201ENST00000300527 EPHA10Q5JZY3 1008 aa17■□□□□ 0.31
COL6A2-201ENST00000300527 NBPF6Q5VWK0 638 aa17■□□□□ 0.31
COL6A2-201ENST00000300527 TTLL5Q6EMB2 1281 aa17■□□□□ 0.31
COL6A2-201ENST00000300527 KLHL34Q8N239 644 aa17■□□□□ 0.31
COL6A2-201ENST00000300527 ENGASEQ8NFI3 743 aa17■□□□□ 0.31
COL6A2-201ENST00000300527 KAZALD1Q96I82 304 aa17■□□□□ 0.31
COL6A2-201ENST00000300527 NBPF4Q96M43 638 aa17■□□□□ 0.31
COL6A2-201ENST00000300527 KDRP35968 1356 aa16.99■□□□□ 0.31
COL6A2-201ENST00000300527 SLC39A6Q13433 755 aa16.99■□□□□ 0.31
COL6A2-201ENST00000300527 C1orf141Q5JVX7 400 aa16.99■□□□□ 0.31
COL6A2-201ENST00000300527 DHX32Q7L7V1 743 aaKnown RBP16.99■□□□□ 0.31
COL6A2-201ENST00000300527 OSBPL5Q9H0X9 879 aaPredicted RBP16.99■□□□□ 0.31
COL6A2-201ENST00000300527 L2HGDHQ9H9P8 463 aa16.99■□□□□ 0.31
COL6A2-201ENST00000300527 TMEM232C9JQI7 657 aa16.99■□□□□ 0.31
COL6A2-201ENST00000300527 GIGYF1O75420 1035 aaPredicted RBP16.99■□□□□ 0.31
COL6A2-201ENST00000300527 MCMDC2Q4G0Z9 681 aa16.99■□□□□ 0.31
COL6A2-201ENST00000300527 HSP90AB3PQ58FF7 597 aa16.99■□□□□ 0.31
COL6A2-201ENST00000300527 FMR1NBQ8N0W7 255 aaPredicted RBP16.99■□□□□ 0.31
COL6A2-201ENST00000300527 C8orf76Q96K31 380 aa16.99■□□□□ 0.31
COL6A2-201ENST00000300527 HDAC5Q9UQL6 1122 aa16.99■□□□□ 0.31
COL6A2-201ENST00000300527 CPLX1O14810 134 aa16.98■□□□□ 0.31
COL6A2-201ENST00000300527 TOP1P11387 765 aaKnown RBP16.98■□□□□ 0.31
COL6A2-201ENST00000300527 GPS2Q13227 327 aa16.98■□□□□ 0.31
COL6A2-201ENST00000300527 COL15A1P39059 1388 aa16.98■□□□□ 0.31
COL6A2-201ENST00000300527 PEAK1Q9H792 1746 aa16.98■□□□□ 0.31
COL6A2-201ENST00000300527 ATP5J2-PTCD1G3V325 749 aa16.98■□□□□ 0.31
COL6A2-201ENST00000300527 PFKFB2O60825 505 aa16.98■□□□□ 0.31
COL6A2-201ENST00000300527 PTCD1O75127 700 aaKnown RBP16.98■□□□□ 0.31
COL6A2-201ENST00000300527 ALDH1L1O75891 902 aa16.98■□□□□ 0.31
COL6A2-201ENST00000300527 ZNF202O95125 648 aa16.98■□□□□ 0.31
COL6A2-201ENST00000300527 NEXNQ0ZGT2 675 aa16.98■□□□□ 0.31
COL6A2-201ENST00000300527 NAA16Q6N069 864 aaPredicted RBP16.98■□□□□ 0.31
COL6A2-201ENST00000300527 IMPACTQ9P2X3 320 aa16.98■□□□□ 0.31
COL6A2-201ENST00000300527 MED23Q9ULK4 1368 aa16.98■□□□□ 0.31
COL6A2-201ENST00000300527 TRIM66O15016 1216 aa16.98■□□□□ 0.31
COL6A2-201ENST00000300527 SPTLC2O15270 562 aa16.98■□□□□ 0.31
COL6A2-201ENST00000300527 DDX58O95786 925 aaKnown RBP16.98■□□□□ 0.31
COL6A2-201ENST00000300527 MCM6Q14566 821 aa16.98■□□□□ 0.31
COL6A2-201ENST00000300527 SMC1AQ14683 1233 aaKnown RBP16.98■□□□□ 0.31
COL6A2-201ENST00000300527 DESI2Q9BSY9 194 aa16.98■□□□□ 0.31
COL6A2-201ENST00000300527 MTX1Q13505 466 aa16.97■□□□□ 0.31
COL6A2-201ENST00000300527 LINS1Q8NG48 757 aa16.97■□□□□ 0.31
COL6A2-201ENST00000300527 AMOTL2Q9Y2J4 779 aa16.97■□□□□ 0.31
COL6A2-201ENST00000300527 PSDA5PKW4 1024 aaPredicted RBP16.97■□□□□ 0.31
COL6A2-201ENST00000300527 CASQ1P31415 396 aa16.97■□□□□ 0.31
COL6A2-201ENST00000300527 SASH3O75995 380 aa16.97■□□□□ 0.31
COL6A2-201ENST00000300527 UBE3BQ7Z3V4 1068 aa16.97■□□□□ 0.31
COL6A2-201ENST00000300527 ILDR1Q86SU0 546 aaPredicted RBP16.97■□□□□ 0.31
COL6A2-201ENST00000300527 USP31Q70CQ4 1352 aa16.96■□□□□ 0.31
COL6A2-201ENST00000300527 FAM69CQ0P6D2 419 aa16.96■□□□□ 0.31
COL6A2-201ENST00000300527 ZSCAN26Q16670 478 aa16.96■□□□□ 0.31
COL6A2-201ENST00000300527 FAM53CQ9NYF3 392 aa16.96■□□□□ 0.31
COL6A2-201ENST00000300527 PUF60Q9UHX1 559 aaKnown RBP16.96■□□□□ 0.31
COL6A2-201ENST00000300527 FEZ2Q9UHY8 353 aaPredicted RBP16.96■□□□□ 0.31
COL6A2-201ENST00000300527 NRKQ7Z2Y5 1582 aa16.96■□□□□ 0.31
COL6A2-201ENST00000300527 SMARCC2Q8TAQ2 1214 aa16.95■□□□□ 0.3
COL6A2-201ENST00000300527 RSPH14Q9UHP6 348 aa16.95■□□□□ 0.3
COL6A2-201ENST00000300527 TUBGCP6Q96RT7 1819 aa16.95■□□□□ 0.3
COL6A2-201ENST00000300527 RXRAP19793 462 aa16.95■□□□□ 0.3
COL6A2-201ENST00000300527 ADKP55263 362 aaKnown RBP16.95■□□□□ 0.3
COL6A2-201ENST00000300527 PNOCQ13519 176 aa16.95■□□□□ 0.3
COL6A2-201ENST00000300527 CCDC93Q567U6 631 aa16.95■□□□□ 0.3
COL6A2-201ENST00000300527 TNNI3KQ59H18 835 aa16.95■□□□□ 0.3
COL6A2-201ENST00000300527 SPECC1Q5M775 1068 aa16.95■□□□□ 0.3
COL6A2-201ENST00000300527 ADALQ6DHV7 355 aa16.95■□□□□ 0.3
COL6A2-201ENST00000300527 WDR24Q96S15 920 aa16.95■□□□□ 0.3
COL6A2-201ENST00000300527 ARFGAP3Q9NP61 516 aa16.95■□□□□ 0.3
COL6A2-201ENST00000300527 SNRKQ9NRH2 765 aa16.95■□□□□ 0.3
COL6A2-201ENST00000300527 FPGT-TNNI3KV9GXZ4 949 aa16.95■□□□□ 0.3
COL6A2-201ENST00000300527 TADA3O75528 432 aa16.95■□□□□ 0.3
COL6A2-201ENST00000300527 PPP2R3AQ06190 1150 aa16.95■□□□□ 0.3
COL6A2-201ENST00000300527 TXLNBQ8N3L3 684 aa16.95■□□□□ 0.3
COL6A2-201ENST00000300527 XRN1Q8IZH2 1706 aaKnown RBP16.94■□□□□ 0.3
COL6A2-201ENST00000300527 PHACTR2O75167 634 aa16.94■□□□□ 0.3
COL6A2-201ENST00000300527 PFKFB1P16118 471 aa16.94■□□□□ 0.3
COL6A2-201ENST00000300527 PDIA3P30101 505 aaKnown RBP16.94■□□□□ 0.3
COL6A2-201ENST00000300527 NLRP12P59046 1061 aa16.94■□□□□ 0.3
COL6A2-201ENST00000300527 WASHC4Q2M389 1173 aa16.94■□□□□ 0.3
COL6A2-201ENST00000300527 IPO4Q8TEX9 1081 aaKnown RBP16.94■□□□□ 0.3
COL6A2-201ENST00000300527 CPLX3Q8WVH0 158 aa16.94■□□□□ 0.3
COL6A2-201ENST00000300527 GOLGA8BA8MQT2 603 aa16.94■□□□□ 0.3
COL6A2-201ENST00000300527 ANKRD65E5RJM6 399 aa16.94■□□□□ 0.3
COL6A2-201ENST00000300527 TIMM10P62072 90 aa16.94■□□□□ 0.3
COL6A2-201ENST00000300527 LINC00301Q8NCQ3 95 aa16.94■□□□□ 0.3
COL6A2-201ENST00000300527 LCMT1Q9UIC8 334 aa16.94■□□□□ 0.3
COL6A2-201ENST00000300527 FANCGO15287 622 aa16.94■□□□□ 0.3
COL6A2-201ENST00000300527 LTKP29376 864 aa16.94■□□□□ 0.3
COL6A2-201ENST00000300527 LRRFIP1Q32MZ4 808 aaKnown RBP16.94■□□□□ 0.3
COL6A2-201ENST00000300527 XAGE3Q8WTP9 111 aa16.94■□□□□ 0.3
COL6A2-201ENST00000300527 CCDC12Q8WUD4 166 aaPredicted RBP16.94■□□□□ 0.3
COL6A2-201ENST00000300527 ZNF609O15014 1411 aa16.94■□□□□ 0.3
COL6A2-201ENST00000300527 PXDNLA1KZ92 1463 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 1044.3 ms