RNA–Protein interactions for RNA: ENST00000286428.5

VBP1-201, Transcript of VHL binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VBP1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-201ENST00000286428 PDRG1Q9NUG6 133 aa22.67■■□□□ 1.22
VBP1-201ENST00000286428 ZAP70P43403 619 aa22.66■■□□□ 1.22
VBP1-201ENST00000286428 SRP68Q9UHB9 627 aaKnown RBP22.66■■□□□ 1.22
VBP1-201ENST00000286428 BLOC1S2Q6QNY1 142 aa22.65■■□□□ 1.22
VBP1-201ENST00000286428 APPBP2Q92624 585 aa22.65■■□□□ 1.22
VBP1-201ENST00000286428 SH2B1Q9NRF2 756 aaPredicted RBP22.65■■□□□ 1.22
VBP1-201ENST00000286428 CTNNA3Q9UI47 895 aa22.65■■□□□ 1.22
VBP1-201ENST00000286428 DDX11L8A8MPP1 907 aa22.65■■□□□ 1.22
VBP1-201ENST00000286428 HMGB1P09429 215 aaKnown RBP22.65■■□□□ 1.22
VBP1-201ENST00000286428 C4BP0C0L5 1744 aa22.65■■□□□ 1.22
VBP1-201ENST00000286428 CHRNDQ07001 517 aa22.65■■□□□ 1.22
VBP1-201ENST00000286428 DDX60Q8IY21 1712 aaKnown RBP22.65■■□□□ 1.22
VBP1-201ENST00000286428 ALDH8A1Q9H2A2 487 aaPredicted RBP22.65■■□□□ 1.22
VBP1-201ENST00000286428 CARMIL3Q8ND23 1372 aa22.64■■□□□ 1.22
VBP1-201ENST00000286428 MCAMP43121 646 aa22.64■■□□□ 1.21
VBP1-201ENST00000286428 UBE4AQ14139 1066 aa22.64■■□□□ 1.21
VBP1-201ENST00000286428 GNL3LQ9NVN8 582 aaKnown RBP22.64■■□□□ 1.21
VBP1-201ENST00000286428 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.64■■□□□ 1.21
VBP1-201ENST00000286428 MCM4P33991 863 aa22.63■■□□□ 1.21
VBP1-201ENST00000286428 WASHC4Q2M389 1173 aa22.63■■□□□ 1.21
VBP1-201ENST00000286428 GOLGA6L22H0YM25 854 aa22.62■■□□□ 1.21
VBP1-201ENST00000286428 PHF14O94880 888 aa22.62■■□□□ 1.21
VBP1-201ENST00000286428 TRIM37O94972 964 aa22.62■■□□□ 1.21
VBP1-201ENST00000286428 AK2P54819 239 aa22.62■■□□□ 1.21
VBP1-201ENST00000286428 UBE3CQ15386 1083 aa22.62■■□□□ 1.21
VBP1-201ENST00000286428 HELBQ8NG08 1087 aaPredicted RBP22.62■■□□□ 1.21
VBP1-201ENST00000286428 SEC62Q99442 399 aaKnown RBP22.62■■□□□ 1.21
VBP1-201ENST00000286428 LRRC4BQ9NT99 713 aa22.62■■□□□ 1.21
VBP1-201ENST00000286428 RPS8P62241 208 aaKnown RBP22.62■■□□□ 1.21
VBP1-201ENST00000286428 ANKRD2Q9GZV1 360 aa22.62■■□□□ 1.21
VBP1-201ENST00000286428 RPAP1Q9BWH6 1393 aaPredicted RBP22.61■■□□□ 1.21
VBP1-201ENST00000286428 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.61■■□□□ 1.21
VBP1-201ENST00000286428 PDIA4P13667 645 aaKnown RBP22.61■■□□□ 1.21
VBP1-201ENST00000286428 PHKA1P46020 1223 aa22.61■■□□□ 1.21
VBP1-201ENST00000286428 SCARF1Q14162 830 aa22.61■■□□□ 1.21
VBP1-201ENST00000286428 ADCK5Q3MIX3 580 aa22.61■■□□□ 1.21
VBP1-201ENST00000286428 SPATA5Q8NB90 893 aa22.61■■□□□ 1.21
VBP1-201ENST00000286428 TNPO1Q92973 898 aaKnown RBP22.61■■□□□ 1.21
VBP1-201ENST00000286428 TAF1LQ8IZX4 1826 aa22.61■■□□□ 1.21
VBP1-201ENST00000286428 MAST3O60307 1309 aa22.6■■□□□ 1.21
VBP1-201ENST00000286428 HSPD1P10809 573 aaKnown RBP22.6■■□□□ 1.21
VBP1-201ENST00000286428 MAP3K12Q12852 859 aa22.6■■□□□ 1.21
VBP1-201ENST00000286428 CAVIN4Q5BKX8 364 aa22.6■■□□□ 1.21
VBP1-201ENST00000286428 CLEC17AQ6ZS10 378 aa22.6■■□□□ 1.21
VBP1-201ENST00000286428 NEK1Q96PY6 1258 aa22.6■■□□□ 1.21
VBP1-201ENST00000286428 PLSCR1O15162 318 aa22.59■■□□□ 1.21
VBP1-201ENST00000286428 CYP2E1P05181 493 aaPredicted RBP22.59■■□□□ 1.21
VBP1-201ENST00000286428 CCDC129Q6ZRS4 1044 aa22.59■■□□□ 1.21
VBP1-201ENST00000286428 RPS6KB1P23443 525 aa22.58■■□□□ 1.21
VBP1-201ENST00000286428 ADD2P35612 726 aa22.58■■□□□ 1.21
VBP1-201ENST00000286428 CNBD1Q8NA66 436 aa22.58■■□□□ 1.21
VBP1-201ENST00000286428 MINPP1Q9UNW1 487 aa22.58■■□□□ 1.21
VBP1-201ENST00000286428 SLC9C2Q5TAH2 1124 aa22.58■■□□□ 1.2
VBP1-201ENST00000286428 OSBP2Q969R2 916 aa22.58■■□□□ 1.2
VBP1-201ENST00000286428 COL24A1Q17RW2 1714 aa22.57■■□□□ 1.2
VBP1-201ENST00000286428 RXRBP28702 533 aa22.57■■□□□ 1.2
VBP1-201ENST00000286428 NFIXQ14938 502 aa22.57■■□□□ 1.2
VBP1-201ENST00000286428 SMIM5Q71RC9 77 aa22.57■■□□□ 1.2
VBP1-201ENST00000286428 NOL8Q76FK4 1167 aaKnown RBP22.57■■□□□ 1.2
VBP1-201ENST00000286428 ZGPATQ8N5A5 531 aaKnown RBP22.57■■□□□ 1.2
VBP1-201ENST00000286428 IDH1O75874 414 aaKnown RBP22.56■■□□□ 1.2
VBP1-201ENST00000286428 ST5P78524 1137 aa22.56■■□□□ 1.2
VBP1-201ENST00000286428 TXNRD1Q16881 649 aa22.56■■□□□ 1.2
VBP1-201ENST00000286428 IMMTQ16891 758 aaKnown RBP22.56■■□□□ 1.2
VBP1-201ENST00000286428 CHMP4CQ96CF2 233 aa22.56■■□□□ 1.2
VBP1-201ENST00000286428 CYP21A2P08686 494 aa22.55■■□□□ 1.2
VBP1-201ENST00000286428 VPS37DQ86XT2 251 aa22.55■■□□□ 1.2
VBP1-201ENST00000286428 ARAP2Q8WZ64 1704 aa22.55■■□□□ 1.2
VBP1-201ENST00000286428 M0R2C6 588 aa22.55■■□□□ 1.2
VBP1-201ENST00000286428 SEMA3EO15041 775 aa22.55■■□□□ 1.2
VBP1-201ENST00000286428 FLAD1Q8NFF5 587 aa22.55■■□□□ 1.2
VBP1-201ENST00000286428 RASGRF1Q13972 1273 aa22.54■■□□□ 1.2
VBP1-201ENST00000286428 SKOR2Q2VWA4 1001 aaPredicted RBP22.54■■□□□ 1.2
VBP1-201ENST00000286428 PI16Q6UXB8 463 aa22.54■■□□□ 1.2
VBP1-201ENST00000286428 C3orf67Q6ZVT6 689 aa22.54■■□□□ 1.2
VBP1-201ENST00000286428 AMIGO3Q86WK7 504 aa22.54■■□□□ 1.2
VBP1-201ENST00000286428 CELF1Q92879 486 aaKnown RBP22.54■■□□□ 1.2
VBP1-201ENST00000286428 ZBTB22O15209 634 aa22.53■■□□□ 1.2
VBP1-201ENST00000286428 GPAA1O43292 621 aa22.53■■□□□ 1.2
VBP1-201ENST00000286428 GYS1P13807 737 aa22.53■■□□□ 1.2
VBP1-201ENST00000286428 BCAMP50895 628 aa22.53■■□□□ 1.2
VBP1-201ENST00000286428 DENND2AQ9ULE3 1009 aa22.53■■□□□ 1.2
VBP1-201ENST00000286428 IGSF3O75054 1194 aa22.52■■□□□ 1.2
VBP1-201ENST00000286428 CHGBP05060 677 aa22.52■■□□□ 1.2
VBP1-201ENST00000286428 PIH1D3Q9NQM4 214 aaKnown RBP22.52■■□□□ 1.2
VBP1-201ENST00000286428 SMC3Q9UQE7 1217 aa22.52■■□□□ 1.2
VBP1-201ENST00000286428 ZNF804BA4D1E1 1349 aa22.52■■□□□ 1.2
VBP1-201ENST00000286428 PDE6AP16499 860 aa22.52■■□□□ 1.2
VBP1-201ENST00000286428 TMED8Q6PL24 325 aaPredicted RBP22.52■■□□□ 1.2
VBP1-201ENST00000286428 DHX32Q7L7V1 743 aaKnown RBP22.52■■□□□ 1.2
VBP1-201ENST00000286428 AIDAQ96BJ3 306 aa22.52■■□□□ 1.2
VBP1-201ENST00000286428 PUS7LQ9H0K6 701 aaKnown RBP22.52■■□□□ 1.2
VBP1-201ENST00000286428 ZNF532Q9HCE3 1301 aa22.51■■□□□ 1.19
VBP1-201ENST00000286428 CPA1P15085 419 aa22.51■■□□□ 1.19
VBP1-201ENST00000286428 GNAT2P19087 354 aa22.51■■□□□ 1.19
VBP1-201ENST00000286428 FGD1P98174 961 aa22.51■■□□□ 1.19
VBP1-201ENST00000286428 GRAPQ13588 217 aa22.51■■□□□ 1.19
VBP1-201ENST00000286428 GRAPLQ8TC17 118 aaPredicted RBP22.51■■□□□ 1.19
VBP1-201ENST00000286428 WDR33Q9C0J8 1336 aaKnown RBP22.5■■□□□ 1.19
VBP1-201ENST00000286428 APBA3O96018 575 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms