RNA–Protein interactions for RNA: ENST00000267202.6

VPS37B-201, Transcript of VPS37B, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS37B, Length 3,028 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-201ENST00000267202 CCDC144CPQ8IYA2 1237 aa21.49■■□□□ 1.03
VPS37B-201ENST00000267202 ZNF75DP51815 510 aa21.49■■□□□ 1.03
VPS37B-201ENST00000267202 ZNF592Q92610 1267 aa21.49■■□□□ 1.03
VPS37B-201ENST00000267202 STRN4Q9NRL3 753 aa21.49■■□□□ 1.03
VPS37B-201ENST00000267202 AFDNP55196 1824 aaKnown RBP21.48■■□□□ 1.03
VPS37B-201ENST00000267202 SIPA1L3O60292 1781 aaPredicted RBP21.48■■□□□ 1.03
VPS37B-201ENST00000267202 MTERF4Q7Z6M4 381 aaKnown RBP21.48■■□□□ 1.03
VPS37B-201ENST00000267202 OSBP2Q969R2 916 aa21.48■■□□□ 1.03
VPS37B-201ENST00000267202 SPTLC3Q9NUV7 552 aa21.48■■□□□ 1.03
VPS37B-201ENST00000267202 CLIP2Q9UDT6 1046 aa21.48■■□□□ 1.03
VPS37B-201ENST00000267202 FAM89AQ96GI7 184 aa21.47■■□□□ 1.03
VPS37B-201ENST00000267202 BCL2L12Q9HB09 334 aa21.47■■□□□ 1.03
VPS37B-201ENST00000267202 KIF3AQ9Y496 699 aa21.47■■□□□ 1.03
VPS37B-201ENST00000267202 PFKFB2O60825 505 aa21.47■■□□□ 1.03
VPS37B-201ENST00000267202 SCARF1Q14162 830 aa21.47■■□□□ 1.03
VPS37B-201ENST00000267202 TAF7LQ5H9L4 462 aa21.47■■□□□ 1.03
VPS37B-201ENST00000267202 GOLGA6L19H0YKK7 550 aa21.47■■□□□ 1.03
VPS37B-201ENST00000267202 U2AF2P26368 475 aaKnown RBP eCLIP21.47■■□□□ 1.03
VPS37B-201ENST00000267202 FILIP1Q7Z7B0 1213 aa21.47■■□□□ 1.03
VPS37B-201ENST00000267202 CFAP45Q9UL16 551 aa21.47■■□□□ 1.03
VPS37B-201ENST00000267202 JCADQ9P266 1359 aa21.46■■□□□ 1.03
VPS37B-201ENST00000267202 H7C1W4 665 aa21.46■■□□□ 1.03
VPS37B-201ENST00000267202 ADD1P35611 737 aaKnown RBP21.46■■□□□ 1.03
VPS37B-201ENST00000267202 FSIP1Q8NA03 581 aa21.46■■□□□ 1.03
VPS37B-201ENST00000267202 ALDH8A1Q9H2A2 487 aaPredicted RBP21.46■■□□□ 1.03
VPS37B-201ENST00000267202 DENND2AQ9ULE3 1009 aa21.46■■□□□ 1.03
VPS37B-201ENST00000267202 A0A1B0GVL5 298 aa21.46■■□□□ 1.03
VPS37B-201ENST00000267202 ISM2Q6H9L7 571 aa21.46■■□□□ 1.03
VPS37B-201ENST00000267202 RXRAP19793 462 aa21.45■■□□□ 1.02
VPS37B-201ENST00000267202 PDIA3P30101 505 aaKnown RBP21.45■■□□□ 1.02
VPS37B-201ENST00000267202 CACTINQ8WUQ7 758 aaKnown RBP21.45■■□□□ 1.02
VPS37B-201ENST00000267202 EYA2O00167 538 aa21.45■■□□□ 1.02
VPS37B-201ENST00000267202 DMTNQ08495 405 aa21.45■■□□□ 1.02
VPS37B-201ENST00000267202 CHAF1AQ13111 956 aaPredicted RBP21.45■■□□□ 1.02
VPS37B-201ENST00000267202 NAA30Q147X3 362 aaPredicted RBP21.45■■□□□ 1.02
VPS37B-201ENST00000267202 ZMYM1Q5SVZ6 1142 aa21.45■■□□□ 1.02
VPS37B-201ENST00000267202 PRIMPOLQ96LW4 560 aa21.45■■□□□ 1.02
VPS37B-201ENST00000267202 BIN1O00499 593 aa21.45■■□□□ 1.02
VPS37B-201ENST00000267202 RNF113AO15541 343 aaKnown RBP21.45■■□□□ 1.02
VPS37B-201ENST00000267202 GPTP24298 496 aa21.45■■□□□ 1.02
VPS37B-201ENST00000267202 CCDC73Q6ZRK6 1079 aa21.45■■□□□ 1.02
VPS37B-201ENST00000267202 BECN2A8MW95 431 aa21.44■■□□□ 1.02
VPS37B-201ENST00000267202 TTC39AQ5SRH9 613 aa21.44■■□□□ 1.02
VPS37B-201ENST00000267202 ZSCAN25Q6NSZ9 544 aa21.44■■□□□ 1.02
VPS37B-201ENST00000267202 PRDM11Q9NQV5 511 aa21.44■■□□□ 1.02
VPS37B-201ENST00000267202 HMGN5P82970 282 aaKnown RBP21.44■■□□□ 1.02
VPS37B-201ENST00000267202 SMARCC2Q8TAQ2 1214 aa21.44■■□□□ 1.02
VPS37B-201ENST00000267202 ZSCAN16Q9H4T2 348 aaPredicted RBP21.44■■□□□ 1.02
VPS37B-201ENST00000267202 CEP126Q9P2H0 1117 aa21.44■■□□□ 1.02
VPS37B-201ENST00000267202 TMEM94Q12767 1356 aa21.43■■□□□ 1.02
VPS37B-201ENST00000267202 IL15P40933 162 aaPredicted RBP21.43■■□□□ 1.02
VPS37B-201ENST00000267202 ILDR1Q86SU0 546 aaPredicted RBP21.43■■□□□ 1.02
VPS37B-201ENST00000267202 SCN11AQ9UI33 1791 aa21.43■■□□□ 1.02
VPS37B-201ENST00000267202 KINO60870 393 aaKnown RBP21.43■■□□□ 1.02
VPS37B-201ENST00000267202 SH3TC1Q8TE82 1336 aa21.43■■□□□ 1.02
VPS37B-201ENST00000267202 EXOSC10Q01780 885 aaKnown RBP21.42■■□□□ 1.02
VPS37B-201ENST00000267202 CCDC57Q2TAC2 916 aa21.42■■□□□ 1.02
VPS37B-201ENST00000267202 ZCRB1Q8TBF4 217 aaKnown RBP21.42■■□□□ 1.02
VPS37B-201ENST00000267202 TRMT1Q9NXH9 659 aaKnown RBP21.42■■□□□ 1.02
VPS37B-201ENST00000267202 PHRF1Q9P1Y6 1649 aaKnown RBP21.42■■□□□ 1.02
VPS37B-201ENST00000267202 ZAP70P43403 619 aa21.42■■□□□ 1.02
VPS37B-201ENST00000267202 SF3A1Q15459 793 aaKnown RBP21.42■■□□□ 1.02
VPS37B-201ENST00000267202 PLA2G4DQ86XP0 818 aa21.42■■□□□ 1.02
VPS37B-201ENST00000267202 TDRD7Q8NHU6 1098 aaKnown RBP21.42■■□□□ 1.02
VPS37B-201ENST00000267202 SDF4Q9BRK5 362 aa21.42■■□□□ 1.02
VPS37B-201ENST00000267202 HELLSQ9NRZ9 838 aa21.42■■□□□ 1.02
VPS37B-201ENST00000267202 FDPSP14324 419 aaKnown RBP21.41■■□□□ 1.02
VPS37B-201ENST00000267202 STK11IPQ8N1F8 1099 aa21.41■■□□□ 1.02
VPS37B-201ENST00000267202 PDCL2Q8N4E4 241 aa21.41■■□□□ 1.02
VPS37B-201ENST00000267202 SYTL4Q96C24 671 aaPredicted RBP21.41■■□□□ 1.02
VPS37B-201ENST00000267202 XAGE2Q96GT9 111 aa21.41■■□□□ 1.02
VPS37B-201ENST00000267202 PUS7LQ9H0K6 701 aaKnown RBP21.41■■□□□ 1.02
VPS37B-201ENST00000267202 CLIC4Q9Y696 253 aa21.41■■□□□ 1.02
VPS37B-201ENST00000267202 KLF18A0A0U1RQI7 1052 aa21.41■■□□□ 1.02
VPS37B-201ENST00000267202 TPD52L1Q16890 204 aaPredicted RBP21.41■■□□□ 1.02
VPS37B-201ENST00000267202 AOPEPQ8N6M6 819 aa21.41■■□□□ 1.02
VPS37B-201ENST00000267202 NKX2-3Q8TAU0 364 aa21.4■■□□□ 1.02
VPS37B-201ENST00000267202 AIFM3Q96NN9 605 aa21.4■■□□□ 1.02
VPS37B-201ENST00000267202 USP27XA6NNY8 438 aa21.4■■□□□ 1.02
VPS37B-201ENST00000267202 GOLGA8BA8MQT2 603 aa21.4■■□□□ 1.02
VPS37B-201ENST00000267202 SNW1Q13573 536 aaKnown RBP21.4■■□□□ 1.02
VPS37B-201ENST00000267202 DSCC1Q9BVC3 393 aa21.4■■□□□ 1.02
VPS37B-201ENST00000267202 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.4■■□□□ 1.02
VPS37B-201ENST00000267202 MRC1P22897 1456 aa21.4■■□□□ 1.02
VPS37B-201ENST00000267202 TRPM3Q9HCF6 1732 aaPredicted RBP21.4■■□□□ 1.02
VPS37B-201ENST00000267202 RBM43Q6ZSC3 357 aaKnown RBP21.39■■□□□ 1.02
VPS37B-201ENST00000267202 PCDHA7Q9UN72 937 aa21.39■■□□□ 1.02
VPS37B-201ENST00000267202 FGAP02671 866 aa21.39■■□□□ 1.01
VPS37B-201ENST00000267202 HMGB1P09429 215 aaKnown RBP21.39■■□□□ 1.01
VPS37B-201ENST00000267202 TNNT1P13805 278 aa21.39■■□□□ 1.01
VPS37B-201ENST00000267202 IQCB1Q15051 598 aa21.39■■□□□ 1.01
VPS37B-201ENST00000267202 RCOR1Q9UKL0 485 aa21.39■■□□□ 1.01
VPS37B-201ENST00000267202 CARMIL3Q8ND23 1372 aa21.39■■□□□ 1.01
VPS37B-201ENST00000267202 A0A0G2JS52 829 aa21.39■■□□□ 1.01
VPS37B-201ENST00000267202 PRC1O43663 620 aa21.39■■□□□ 1.01
VPS37B-201ENST00000267202 APPP05067 770 aa21.38■■□□□ 1.01
VPS37B-201ENST00000267202 CCDC158Q5M9N0 1113 aa21.38■■□□□ 1.01
VPS37B-201ENST00000267202 INCENPQ9NQS7 918 aa21.38■■□□□ 1.01
VPS37B-201ENST00000267202 ARFGEF2Q9Y6D5 1785 aa21.38■■□□□ 1.01
VPS37B-201ENST00000267202 STK38Q15208 465 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms