RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 MINDY4BA8MYZ0 360 aa18.82■□□□□ 0.6
PDZRN3-201ENST00000263666 ZSCAN16Q9H4T2 348 aaPredicted RBP18.82■□□□□ 0.6
PDZRN3-201ENST00000263666 AXIN2Q9Y2T1 843 aa18.82■□□□□ 0.6
PDZRN3-201ENST00000263666 ERICH2A1L162 156 aa18.81■□□□□ 0.6
PDZRN3-201ENST00000263666 IFIT5Q13325 482 aaKnown RBP18.81■□□□□ 0.6
PDZRN3-201ENST00000263666 MRPS27Q92552 414 aaKnown RBP18.81■□□□□ 0.6
PDZRN3-201ENST00000263666 TM6SF1Q9BZW5 370 aa18.81■□□□□ 0.6
PDZRN3-201ENST00000263666 SCRN1Q12765 414 aa18.81■□□□□ 0.6
PDZRN3-201ENST00000263666 AIDAQ96BJ3 306 aa18.81■□□□□ 0.6
PDZRN3-201ENST00000263666 CTNNA3Q9UI47 895 aa18.81■□□□□ 0.6
PDZRN3-201ENST00000263666 POLR3GO15318 223 aaPredicted RBP18.81■□□□□ 0.6
PDZRN3-201ENST00000263666 TDO2P48775 406 aa18.81■□□□□ 0.6
PDZRN3-201ENST00000263666 VPS37DQ86XT2 251 aa18.81■□□□□ 0.6
PDZRN3-201ENST00000263666 GTF3C6Q969F1 213 aa18.81■□□□□ 0.6
PDZRN3-201ENST00000263666 AGLP35573 1532 aa18.8■□□□□ 0.6
PDZRN3-201ENST00000263666 IGKV5-2P06315 115 aa18.8■□□□□ 0.6
PDZRN3-201ENST00000263666 C11orf57Q6ZUT1 292 aaPredicted RBP18.8■□□□□ 0.6
PDZRN3-201ENST00000263666 PUS3Q9BZE2 481 aaKnown RBP18.8■□□□□ 0.6
PDZRN3-201ENST00000263666 IL2RBP14784 551 aa18.8■□□□□ 0.6
PDZRN3-201ENST00000263666 ZSCAN25Q6NSZ9 544 aa18.8■□□□□ 0.6
PDZRN3-201ENST00000263666 PI16Q6UXB8 463 aa18.8■□□□□ 0.6
PDZRN3-201ENST00000263666 ZKSCAN3Q9BRR0 538 aa18.8■□□□□ 0.6
PDZRN3-201ENST00000263666 HMGB1P09429 215 aaKnown RBP18.79■□□□□ 0.6
PDZRN3-201ENST00000263666 SNW1Q13573 536 aaKnown RBP18.79■□□□□ 0.6
PDZRN3-201ENST00000263666 CACTINQ8WUQ7 758 aaKnown RBP18.79■□□□□ 0.6
PDZRN3-201ENST00000263666 G3V3G9 751 aa18.79■□□□□ 0.6
PDZRN3-201ENST00000263666 DCAF8Q5TAQ9 597 aa18.79■□□□□ 0.6
PDZRN3-201ENST00000263666 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.79■□□□□ 0.6
PDZRN3-201ENST00000263666 CGNQ9P2M7 1197 aaKnown RBP18.79■□□□□ 0.6
PDZRN3-201ENST00000263666 SYT10Q6XYQ8 523 aa18.79■□□□□ 0.6
PDZRN3-201ENST00000263666 ACSBG1Q96GR2 724 aa18.79■□□□□ 0.6
PDZRN3-201ENST00000263666 SLC26A6Q9BXS9 759 aa18.79■□□□□ 0.6
PDZRN3-201ENST00000263666 SLC9C2Q5TAH2 1124 aa18.78■□□□□ 0.6
PDZRN3-201ENST00000263666 KIAA1524Q8TCG1 905 aa18.78■□□□□ 0.6
PDZRN3-201ENST00000263666 PHKBQ93100 1093 aa18.78■□□□□ 0.6
PDZRN3-201ENST00000263666 DNAI1Q9UI46 699 aa18.78■□□□□ 0.6
PDZRN3-201ENST00000263666 HOXB7P09629 217 aa18.78■□□□□ 0.6
PDZRN3-201ENST00000263666 BICDL1Q6ZP65 573 aa18.78■□□□□ 0.6
PDZRN3-201ENST00000263666 ADCY9O60503 1353 aa18.78■□□□□ 0.6
PDZRN3-201ENST00000263666 TOB2Q14106 344 aaPredicted RBP18.78■□□□□ 0.6
PDZRN3-201ENST00000263666 ALG1Q9BT22 464 aa18.78■□□□□ 0.6
PDZRN3-201ENST00000263666 SPTLC2O15270 562 aa18.77■□□□□ 0.6
PDZRN3-201ENST00000263666 KBTBD3Q8NAB2 608 aa18.77■□□□□ 0.6
PDZRN3-201ENST00000263666 SLC52A2Q9HAB3 445 aa18.77■□□□□ 0.6
PDZRN3-201ENST00000263666 KDRP35968 1356 aa18.77■□□□□ 0.6
PDZRN3-201ENST00000263666 IFIT3O14879 490 aaKnown RBP18.77■□□□□ 0.6
PDZRN3-201ENST00000263666 CNNM3Q8NE01 707 aa18.77■□□□□ 0.6
PDZRN3-201ENST00000263666 PGBD1Q96JS3 809 aa18.77■□□□□ 0.6
PDZRN3-201ENST00000263666 TRMT112Q9UI30 125 aaKnown RBP18.77■□□□□ 0.6
PDZRN3-201ENST00000263666 A0A0G2JLW4 131 aa18.77■□□□□ 0.59
PDZRN3-201ENST00000263666 E7EWF7 191 aa18.76■□□□□ 0.59
PDZRN3-201ENST00000263666 AP5Z1O43299 807 aa18.76■□□□□ 0.59
PDZRN3-201ENST00000263666 METAP2P50579 478 aaKnown RBP eCLIP18.76■□□□□ 0.59
PDZRN3-201ENST00000263666 UBXN4Q92575 508 aa18.76■□□□□ 0.59
PDZRN3-201ENST00000263666 SALL3Q9BXA9 1300 aa18.76■□□□□ 0.59
PDZRN3-201ENST00000263666 GOLGA8AA7E2F4 631 aa18.76■□□□□ 0.59
PDZRN3-201ENST00000263666 CTAGE5O15320 804 aa18.76■□□□□ 0.59
PDZRN3-201ENST00000263666 MPHOSPH8Q99549 860 aa18.76■□□□□ 0.59
PDZRN3-201ENST00000263666 RNF113AO15541 343 aaKnown RBP18.76■□□□□ 0.59
PDZRN3-201ENST00000263666 SYKP43405 635 aa18.76■□□□□ 0.59
PDZRN3-201ENST00000263666 GOLGA8FQ08AF8 430 aa18.76■□□□□ 0.59
PDZRN3-201ENST00000263666 GOLGA8DPQ0D2H9 430 aa18.76■□□□□ 0.59
PDZRN3-201ENST00000263666 TEX35Q5T0J7 233 aa18.76■□□□□ 0.59
PDZRN3-201ENST00000263666 NAPBQ9H115 298 aa18.76■□□□□ 0.59
PDZRN3-201ENST00000263666 ZFP91Q96JP5 570 aaPredicted RBP18.76■□□□□ 0.59
PDZRN3-201ENST00000263666 PCMTD1Q96MG8 357 aaPredicted RBP18.76■□□□□ 0.59
PDZRN3-201ENST00000263666 BABAM1Q9NWV8 329 aa18.76■□□□□ 0.59
PDZRN3-201ENST00000263666 JMYQ8N9B5 988 aa18.75■□□□□ 0.59
PDZRN3-201ENST00000263666 MYO5BQ9ULV0 1848 aa18.75■□□□□ 0.59
PDZRN3-201ENST00000263666 TOP1P11387 765 aaKnown RBP18.75■□□□□ 0.59
PDZRN3-201ENST00000263666 TMEM67Q5HYA8 995 aa18.75■□□□□ 0.59
PDZRN3-201ENST00000263666 LRP2BPQ9P2M1 347 aa18.75■□□□□ 0.59
PDZRN3-201ENST00000263666 CEP170BQ9Y4F5 1589 aaPredicted RBP18.75■□□□□ 0.59
PDZRN3-201ENST00000263666 ATP5JP18859 108 aa18.75■□□□□ 0.59
PDZRN3-201ENST00000263666 NCOA7Q8NI08 942 aa18.75■□□□□ 0.59
PDZRN3-201ENST00000263666 KCNF1Q9H3M0 494 aa18.75■□□□□ 0.59
PDZRN3-201ENST00000263666 ELF2Q15723 593 aa18.74■□□□□ 0.59
PDZRN3-201ENST00000263666 CMTR1Q8N1G2 835 aaKnown RBP18.74■□□□□ 0.59
PDZRN3-201ENST00000263666 CCDC34Q96HJ3 373 aa18.74■□□□□ 0.59
PDZRN3-201ENST00000263666 B4E1Z4 1266 aa18.74■□□□□ 0.59
PDZRN3-201ENST00000263666 ADORA1P30542 326 aa18.74■□□□□ 0.59
PDZRN3-201ENST00000263666 IL15P40933 162 aaPredicted RBP18.74■□□□□ 0.59
PDZRN3-201ENST00000263666 IARSP41252 1262 aaKnown RBP18.74■□□□□ 0.59
PDZRN3-201ENST00000263666 TERF1P54274 439 aa18.74■□□□□ 0.59
PDZRN3-201ENST00000263666 UBASH3AP57075 661 aa18.74■□□□□ 0.59
PDZRN3-201ENST00000263666 PTPN12Q05209 780 aaKnown RBP18.74■□□□□ 0.59
PDZRN3-201ENST00000263666 FAM160A1Q05DH4 1040 aa18.74■□□□□ 0.59
PDZRN3-201ENST00000263666 ATP2B3Q16720 1220 aa18.73■□□□□ 0.59
PDZRN3-201ENST00000263666 ZAP70P43403 619 aa18.73■□□□□ 0.59
PDZRN3-201ENST00000263666 DDB1Q16531 1140 aa18.73■□□□□ 0.59
PDZRN3-201ENST00000263666 TRIM22Q8IYM9 498 aa18.73■□□□□ 0.59
PDZRN3-201ENST00000263666 AIFM3Q96NN9 605 aa18.73■□□□□ 0.59
PDZRN3-201ENST00000263666 OVOS2A0A0J9YW53 1432 aa18.73■□□□□ 0.59
PDZRN3-201ENST00000263666 OVOS2Q6IE36 1432 aa18.73■□□□□ 0.59
PDZRN3-201ENST00000263666 ADD1P35611 737 aaKnown RBP18.73■□□□□ 0.59
PDZRN3-201ENST00000263666 VIRMAQ69YN4 1812 aaKnown RBP18.73■□□□□ 0.59
PDZRN3-201ENST00000263666 hCG_1642624A0A1W2PR95 340 aa18.73■□□□□ 0.59
PDZRN3-201ENST00000263666 HSPD1P10809 573 aaKnown RBP18.73■□□□□ 0.59
PDZRN3-201ENST00000263666 HOOK1Q9UJC3 728 aaKnown RBP18.73■□□□□ 0.59
PDZRN3-201ENST00000263666 PDIA4P13667 645 aaKnown RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms