RNA–Protein interactions for RNA: ENST00000262659.12

CCM2L-201, Transcript of CCM2 like scaffold protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCM2L, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2L-201ENST00000262659 WWC2Q6AWC2 1192 aa27.58■■■□□ 2
CCM2L-201ENST00000262659 USP28Q96RU2 1077 aa27.58■■■□□ 2
CCM2L-201ENST00000262659 FOSBP53539 338 aa27.57■■■□□ 2
CCM2L-201ENST00000262659 BICC1Q9H694 974 aaKnown RBP27.57■■■□□ 2
CCM2L-201ENST00000262659 ARHGEF10O15013 1369 aa27.57■■■□□ 2
CCM2L-201ENST00000262659 PHACTR2O75167 634 aa27.57■■■□□ 2
CCM2L-201ENST00000262659 ATP1A3P13637 1013 aa27.57■■■□□ 2
CCM2L-201ENST00000262659 NCAPHQ15003 741 aa27.57■■■□□ 2
CCM2L-201ENST00000262659 BPIFA3Q9BQP9 254 aa27.57■■■□□ 2
CCM2L-201ENST00000262659 ME1P48163 572 aa27.56■■■□□ 2
CCM2L-201ENST00000262659 POLA2Q14181 598 aa27.56■■■□□ 2
CCM2L-201ENST00000262659 PTPN21Q16825 1174 aa27.56■■■□□ 2
CCM2L-201ENST00000262659 MICALL1Q8N3F8 863 aa27.56■■■□□ 2
CCM2L-201ENST00000262659 CNNM3Q8NE01 707 aa27.56■■■□□ 2
CCM2L-201ENST00000262659 KIFC2Q96AC6 838 aa27.56■■■□□ 2
CCM2L-201ENST00000262659 FAM227BQ96M60 508 aa27.56■■■□□ 2
CCM2L-201ENST00000262659 NEXMIFQ5QGS0 1516 aa27.56■■■□□ 2
CCM2L-201ENST00000262659 BIN1O00499 593 aa27.56■■■□□ 2
CCM2L-201ENST00000262659 HNRNPLLQ8WVV9 542 aaKnown RBP27.56■■■□□ 2
CCM2L-201ENST00000262659 MAP3K5Q99683 1374 aa27.55■■■□□ 2
CCM2L-201ENST00000262659 MAP2K2P36507 400 aa27.55■■■□□ 2
CCM2L-201ENST00000262659 ZRSR1Q15695 479 aaKnown RBP27.55■■■□□ 2
CCM2L-201ENST00000262659 ANKZF1Q9H8Y5 726 aa27.55■■■□□ 2
CCM2L-201ENST00000262659 SUFUQ9UMX1 484 aa27.55■■■□□ 2
CCM2L-201ENST00000262659 FMR1NBQ8N0W7 255 aaPredicted RBP27.55■■■□□ 2
CCM2L-201ENST00000262659 KIAA1468Q9P260 1216 aa27.55■■■□□ 2
CCM2L-201ENST00000262659 EIF3JO75822 258 aaKnown RBP27.54■■■□□ 2
CCM2L-201ENST00000262659 ANKRD20A12PQ8NF67 263 aa27.54■■■□□ 2
CCM2L-201ENST00000262659 DPF2Q92785 391 aa27.54■■■□□ 2
CCM2L-201ENST00000262659 DHX37Q8IY37 1157 aaKnown RBP27.54■■■□□ 2
CCM2L-201ENST00000262659 FCHSD1Q86WN1 690 aa27.53■■■□□ 2
CCM2L-201ENST00000262659 PNKPQ96T60 521 aa27.53■■■□□ 2
CCM2L-201ENST00000262659 ALDH8A1Q9H2A2 487 aaPredicted RBP27.53■■■□□ 2
CCM2L-201ENST00000262659 L1RE1Q9UN81 338 aa27.53■■■□□ 2
CCM2L-201ENST00000262659 XRN1Q8IZH2 1706 aaKnown RBP27.53■■■□□ 2
CCM2L-201ENST00000262659 A0A087WUV0 522 aaPredicted RBP27.52■■■□□ 2
CCM2L-201ENST00000262659 A0A1B0GVL5 298 aa27.52■■■□□ 2
CCM2L-201ENST00000262659 TMEM139Q8IV31 216 aa27.52■■■□□ 2
CCM2L-201ENST00000262659 DNAAF4Q8WXU2 420 aa27.52■■■□□ 2
CCM2L-201ENST00000262659 USP42Q9H9J4 1324 aaKnown RBP27.52■■■□□ 2
CCM2L-201ENST00000262659 PPFIA4O75335 1185 aa27.52■■■□□ 2
CCM2L-201ENST00000262659 SKIDA1Q1XH10 827 aa27.52■■■□□ 2
CCM2L-201ENST00000262659 KAT2BQ92831 832 aa27.52■■■□□ 2
CCM2L-201ENST00000262659 ABCB6Q9NP58 842 aa27.52■■■□□ 2
CCM2L-201ENST00000262659 PLEKHO1Q53GL0 409 aaPredicted RBP27.51■■■□□ 2
CCM2L-201ENST00000262659 CCDC102AQ96A19 550 aa27.51■■■□□ 2
CCM2L-201ENST00000262659 ATP6V1AP38606 617 aa27.51■■□□□ 1.99
CCM2L-201ENST00000262659 CHMP4BP1P59074 171 aa27.51■■□□□ 1.99
CCM2L-201ENST00000262659 NMIQ13287 307 aaPredicted RBP27.5■■□□□ 1.99
CCM2L-201ENST00000262659 ISM2Q6H9L7 571 aa27.5■■□□□ 1.99
CCM2L-201ENST00000262659 HSD3B7Q9H2F3 369 aa27.5■■□□□ 1.99
CCM2L-201ENST00000262659 ARHGAP6O43182 974 aa27.5■■□□□ 1.99
CCM2L-201ENST00000262659 USP5P45974 858 aa27.5■■□□□ 1.99
CCM2L-201ENST00000262659 DNAJC21Q5F1R6 531 aaKnown RBP27.5■■□□□ 1.99
CCM2L-201ENST00000262659 NPHP4O75161 1426 aaPredicted RBP27.5■■□□□ 1.99
CCM2L-201ENST00000262659 UBASH3AP57075 661 aa27.49■■□□□ 1.99
CCM2L-201ENST00000262659 MRPS27Q92552 414 aaKnown RBP27.49■■□□□ 1.99
CCM2L-201ENST00000262659 FAM204AQ9H8W3 233 aa27.49■■□□□ 1.99
CCM2L-201ENST00000262659 NDUFA8P51970 172 aa27.49■■□□□ 1.99
CCM2L-201ENST00000262659 SIL1Q9H173 461 aa27.49■■□□□ 1.99
CCM2L-201ENST00000262659 PUF60Q9UHX1 559 aaKnown RBP27.49■■□□□ 1.99
CCM2L-201ENST00000262659 IDI1Q13907 227 aa27.48■■□□□ 1.99
CCM2L-201ENST00000262659 EIF4A2Q14240 407 aaKnown RBP27.48■■□□□ 1.99
CCM2L-201ENST00000262659 TTLL5Q6EMB2 1281 aa27.48■■□□□ 1.99
CCM2L-201ENST00000262659 TOGARAM2Q6ZUX3 1019 aa27.48■■□□□ 1.99
CCM2L-201ENST00000262659 MSL3Q8N5Y2 521 aaKnown RBP27.48■■□□□ 1.99
CCM2L-201ENST00000262659 FAM71BQ8TC56 605 aa27.48■■□□□ 1.99
CCM2L-201ENST00000262659 RAB21Q9UL25 225 aa27.48■■□□□ 1.99
CCM2L-201ENST00000262659 PCDHA7Q9UN72 937 aa27.48■■□□□ 1.99
CCM2L-201ENST00000262659 FOXO3O43524 673 aa27.48■■□□□ 1.99
CCM2L-201ENST00000262659 HSP90B2PQ58FF3 399 aa27.48■■□□□ 1.99
CCM2L-201ENST00000262659 CCDC12Q8WUD4 166 aaPredicted RBP27.48■■□□□ 1.99
CCM2L-201ENST00000262659 CARD10Q9BWT7 1032 aa27.48■■□□□ 1.99
CCM2L-201ENST00000262659 MNAT1P51948 309 aa27.47■■□□□ 1.99
CCM2L-201ENST00000262659 ERC1Q8IUD2 1116 aa27.47■■□□□ 1.99
CCM2L-201ENST00000262659 NEDD4P46934 1319 aa27.47■■□□□ 1.99
CCM2L-201ENST00000262659 TMEM232C9JQI7 657 aa27.47■■□□□ 1.99
CCM2L-201ENST00000262659 SRGAP1Q7Z6B7 1085 aa27.47■■□□□ 1.99
CCM2L-201ENST00000262659 ECHDC1Q9NTX5 307 aa27.47■■□□□ 1.99
CCM2L-201ENST00000262659 SERPINC1P01008 464 aa27.46■■□□□ 1.99
CCM2L-201ENST00000262659 CASP8Q14790 479 aa27.46■■□□□ 1.99
CCM2L-201ENST00000262659 CFAP100Q494V2 611 aa27.46■■□□□ 1.99
CCM2L-201ENST00000262659 EVI5LQ96CN4 794 aa27.46■■□□□ 1.99
CCM2L-201ENST00000262659 MED4Q9NPJ6 270 aa27.46■■□□□ 1.99
CCM2L-201ENST00000262659 KIF1CO43896 1103 aaKnown RBP27.46■■□□□ 1.99
CCM2L-201ENST00000262659 CUTAO60888 179 aa27.46■■□□□ 1.99
CCM2L-201ENST00000262659 ERLIN2O94905 339 aa27.46■■□□□ 1.99
CCM2L-201ENST00000262659 NLRP12P59046 1061 aa27.46■■□□□ 1.99
CCM2L-201ENST00000262659 MYH15Q9Y2K3 1946 aa27.45■■□□□ 1.99
CCM2L-201ENST00000262659 GOLGA6L9A6NEM1 432 aa27.45■■□□□ 1.99
CCM2L-201ENST00000262659 ERLIN1O75477 346 aa27.45■■□□□ 1.99
CCM2L-201ENST00000262659 TOP1P11387 765 aaKnown RBP27.45■■□□□ 1.99
CCM2L-201ENST00000262659 HSP90B1P14625 803 aaKnown RBP27.45■■□□□ 1.99
CCM2L-201ENST00000262659 EIF5P55010 431 aaKnown RBP27.45■■□□□ 1.99
CCM2L-201ENST00000262659 OS9Q13438 667 aaPredicted RBP27.45■■□□□ 1.99
CCM2L-201ENST00000262659 KARSQ15046 597 aaKnown RBP27.45■■□□□ 1.99
CCM2L-201ENST00000262659 VSTM4Q8IW00 320 aa27.45■■□□□ 1.99
CCM2L-201ENST00000262659 COG3Q96JB2 828 aa27.45■■□□□ 1.99
CCM2L-201ENST00000262659 IRX2Q9BZI1 471 aaPredicted RBP27.45■■□□□ 1.99
CCM2L-201ENST00000262659 WDHD1O75717 1129 aaPredicted RBP27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms