RNA–Protein interactions for RNA: ENST00000229387.6

RFX4-201, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-201ENST00000229387 KDRP35968 1356 aa6.61□□□□□ -1.35
RFX4-201ENST00000229387 TNRQ92752 1358 aa6.61□□□□□ -1.35
RFX4-201ENST00000229387 MYO5BQ9ULV0 1848 aa6.61□□□□□ -1.35
RFX4-201ENST00000229387 EIF5P55010 431 aaKnown RBP6.61□□□□□ -1.35
RFX4-201ENST00000229387 FOXD4L6Q3SYB3 417 aaPredicted RBP6.61□□□□□ -1.35
RFX4-201ENST00000229387 FOXD4L3Q6VB84 417 aaPredicted RBP6.61□□□□□ -1.35
RFX4-201ENST00000229387 ACRBPQ8NEB7 543 aa6.61□□□□□ -1.35
RFX4-201ENST00000229387 GIPC2Q8TF65 315 aa6.61□□□□□ -1.35
RFX4-201ENST00000229387 GTF3C6Q969F1 213 aa6.61□□□□□ -1.35
RFX4-201ENST00000229387 DDX19BQ9UMR2 479 aa6.61□□□□□ -1.35
RFX4-201ENST00000229387 EID1Q9Y6B2 187 aa6.61□□□□□ -1.35
RFX4-201ENST00000229387 ELP1O95163 1332 aa6.61□□□□□ -1.35
RFX4-201ENST00000229387 TTC21BQ7Z4L5 1316 aa6.61□□□□□ -1.35
RFX4-201ENST00000229387 RBM47A0AV96 593 aaKnown RBP6.6□□□□□ -1.35
RFX4-201ENST00000229387 CSB-PGBD3P0DP91 1061 aa6.6□□□□□ -1.35
RFX4-201ENST00000229387 PSMD2Q13200 908 aa6.6□□□□□ -1.35
RFX4-201ENST00000229387 HSP90B2PQ58FF3 399 aa6.6□□□□□ -1.35
RFX4-201ENST00000229387 TSHZ3Q63HK5 1081 aa6.6□□□□□ -1.35
RFX4-201ENST00000229387 TCP11Q8WWU5 503 aa6.6□□□□□ -1.35
RFX4-201ENST00000229387 CRACR2AQ9BSW2 395 aa6.6□□□□□ -1.35
RFX4-201ENST00000229387 SRRTQ9BXP5 876 aaKnown RBP6.6□□□□□ -1.35
RFX4-201ENST00000229387 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.6□□□□□ -1.35
RFX4-201ENST00000229387 ARHGEF40Q8TER5 1519 aa6.6□□□□□ -1.35
RFX4-201ENST00000229387 RIMBP3CA6NJZ7 1639 aa6.6□□□□□ -1.35
RFX4-201ENST00000229387 RIMBP3BA6NNM3 1639 aa6.6□□□□□ -1.35
RFX4-201ENST00000229387 RIMBP3Q9UFD9 1639 aa6.6□□□□□ -1.35
RFX4-201ENST00000229387 HNRNPH1P31943 449 aaKnown RBP6.6□□□□□ -1.35
RFX4-201ENST00000229387 CRISPLD2Q9H0B8 497 aa6.6□□□□□ -1.35
RFX4-201ENST00000229387 ZBTB40Q9NUA8 1239 aa6.6□□□□□ -1.35
RFX4-201ENST00000229387 CLIP2Q9UDT6 1046 aa6.6□□□□□ -1.35
RFX4-201ENST00000229387 SYNPO2Q9UMS6 1093 aa6.6□□□□□ -1.35
RFX4-201ENST00000229387 SETBP1Q9Y6X0 1596 aa6.6□□□□□ -1.35
RFX4-201ENST00000229387 IQSEC2Q5JU85 1478 aa6.6□□□□□ -1.35
RFX4-201ENST00000229387 HDGFP51858 240 aaKnown RBP6.6□□□□□ -1.35
RFX4-201ENST00000229387 LRRC31Q6UY01 552 aa6.6□□□□□ -1.35
RFX4-201ENST00000229387 MICAL1Q8TDZ2 1067 aa6.6□□□□□ -1.35
RFX4-201ENST00000229387 OTUD7AQ8TE49 926 aaPredicted RBP6.6□□□□□ -1.35
RFX4-201ENST00000229387 PHOX2BQ99453 314 aa6.6□□□□□ -1.35
RFX4-201ENST00000229387 RBM27Q9P2N5 1060 aaKnown RBP6.6□□□□□ -1.35
RFX4-201ENST00000229387 ERBB3P21860 1342 aa6.59□□□□□ -1.35
RFX4-201ENST00000229387 SYNRGQ9UMZ2 1314 aa6.59□□□□□ -1.35
RFX4-201ENST00000229387 NSD2O96028 1365 aa6.59□□□□□ -1.35
RFX4-201ENST00000229387 SLU7O95391 586 aaKnown RBP6.59□□□□□ -1.35
RFX4-201ENST00000229387 GPTP24298 496 aa6.59□□□□□ -1.35
RFX4-201ENST00000229387 SH3D19Q5HYK7 790 aa6.59□□□□□ -1.35
RFX4-201ENST00000229387 G2E3Q7L622 706 aa6.59□□□□□ -1.35
RFX4-201ENST00000229387 ABTB2Q8N961 1025 aa6.59□□□□□ -1.35
RFX4-201ENST00000229387 CTCFLQ8NI51 663 aaPredicted RBP6.59□□□□□ -1.35
RFX4-201ENST00000229387 HOMER3Q9NSC5 361 aa6.59□□□□□ -1.35
RFX4-201ENST00000229387 ZNF215Q9UL58 517 aaPredicted RBP6.59□□□□□ -1.35
RFX4-201ENST00000229387 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.59□□□□□ -1.35
RFX4-201ENST00000229387 MAP3K19Q56UN5 1328 aa6.59□□□□□ -1.35
RFX4-201ENST00000229387 TMEM131LA2VDJ0 1609 aa6.59□□□□□ -1.35
RFX4-201ENST00000229387 AATKQ6ZMQ8 1374 aa6.59□□□□□ -1.35
RFX4-201ENST00000229387 CPS1P31327 1500 aa6.59□□□□□ -1.35
RFX4-201ENST00000229387 ECEL1O95672 775 aa6.59□□□□□ -1.35
RFX4-201ENST00000229387 CLCN6P51797 869 aa6.59□□□□□ -1.35
RFX4-201ENST00000229387 CCNHP51946 323 aaPredicted RBP6.59□□□□□ -1.35
RFX4-201ENST00000229387 MTHFSDQ2M296 383 aaKnown RBP6.59□□□□□ -1.35
RFX4-201ENST00000229387 NFXL1Q6ZNB6 911 aa6.59□□□□□ -1.35
RFX4-201ENST00000229387 MRPL50Q8N5N7 158 aaKnown RBP6.59□□□□□ -1.35
RFX4-201ENST00000229387 RNF214Q8ND24 703 aa6.59□□□□□ -1.35
RFX4-201ENST00000229387 IFT172Q9UG01 1749 aa6.59□□□□□ -1.35
RFX4-201ENST00000229387 H7C1W4 665 aa6.58□□□□□ -1.36
RFX4-201ENST00000229387 ANXA1P04083 346 aa6.58□□□□□ -1.36
RFX4-201ENST00000229387 GNAI1P63096 354 aa6.58□□□□□ -1.36
RFX4-201ENST00000229387 ELF2Q15723 593 aa6.58□□□□□ -1.36
RFX4-201ENST00000229387 C9orf131Q5VYM1 1079 aa6.58□□□□□ -1.36
RFX4-201ENST00000229387 CEP135Q66GS9 1140 aa6.58□□□□□ -1.36
RFX4-201ENST00000229387 SIRT2Q8IXJ6 389 aa6.58□□□□□ -1.36
RFX4-201ENST00000229387 ATL2Q8NHH9 583 aa6.58□□□□□ -1.36
RFX4-201ENST00000229387 VTI1AQ96AJ9 217 aa6.58□□□□□ -1.36
RFX4-201ENST00000229387 PLEKHG4BQ96PX9 1271 aa6.58□□□□□ -1.36
RFX4-201ENST00000229387 KCND1Q9NSA2 647 aa6.58□□□□□ -1.36
RFX4-201ENST00000229387 ARGLU1Q9NWB6 273 aaPredicted RBP6.58□□□□□ -1.36
RFX4-201ENST00000229387 CWC25Q9NXE8 425 aaPredicted RBP6.58□□□□□ -1.36
RFX4-201ENST00000229387 ADAM21Q9UKJ8 722 aa6.58□□□□□ -1.36
RFX4-201ENST00000229387 EXOC6BQ9Y2D4 811 aa6.58□□□□□ -1.36
RFX4-201ENST00000229387 TMEM2Q9UHN6 1383 aa6.58□□□□□ -1.36
RFX4-201ENST00000229387 RICTORQ6R327 1708 aa6.58□□□□□ -1.36
RFX4-201ENST00000229387 ARHGEF28Q8N1W1 1705 aaKnown RBP6.58□□□□□ -1.36
RFX4-201ENST00000229387 PRPF40AO75400 957 aaKnown RBP6.58□□□□□ -1.36
RFX4-201ENST00000229387 PREPLQ4J6C6 727 aaPredicted RBP6.58□□□□□ -1.36
RFX4-201ENST00000229387 WLSQ5T9L3 541 aa6.58□□□□□ -1.36
RFX4-201ENST00000229387 ANKRD18AQ8IVF6 992 aa6.58□□□□□ -1.36
RFX4-201ENST00000229387 NME8Q8N427 588 aa6.58□□□□□ -1.36
RFX4-201ENST00000229387 DDX11Q96FC9 970 aa6.58□□□□□ -1.36
RFX4-201ENST00000229387 IQCGQ9H095 443 aaKnown RBP6.58□□□□□ -1.36
RFX4-201ENST00000229387 RMI1Q9H9A7 625 aa6.58□□□□□ -1.36
RFX4-201ENST00000229387 SHPRHQ149N8 1683 aa6.58□□□□□ -1.36
RFX4-201ENST00000229387 KIAA1210Q9ULL0 1709 aa6.58□□□□□ -1.36
RFX4-201ENST00000229387 ZBTB7BO15156 539 aaPredicted RBP6.58□□□□□ -1.36
RFX4-201ENST00000229387 EIF2S2P20042 333 aaKnown RBP6.58□□□□□ -1.36
RFX4-201ENST00000229387 RDXP35241 583 aaKnown RBP6.58□□□□□ -1.36
RFX4-201ENST00000229387 MDM2Q00987 491 aaPredicted RBP6.58□□□□□ -1.36
RFX4-201ENST00000229387 CAMK2BQ13554 666 aa6.58□□□□□ -1.36
RFX4-201ENST00000229387 HELBQ8NG08 1087 aaPredicted RBP6.58□□□□□ -1.36
RFX4-201ENST00000229387 SREK1Q8WXA9 508 aaKnown RBP6.58□□□□□ -1.36
RFX4-201ENST00000229387 MEIS3Q99687 375 aa6.58□□□□□ -1.36
RFX4-201ENST00000229387 ARPC5LQ9BPX5 153 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms