RNA–Protein interactions for RNA: ENST00000225519.3

SHPK-201, Transcript of sedoheptulokinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHPK, Length 3,838 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPK-201ENST00000225519 TADA3O75528 432 aa16.47■□□□□ 0.23
SHPK-201ENST00000225519 ZRANB2O95218 330 aaKnown RBP eCLIP16.47■□□□□ 0.23
SHPK-201ENST00000225519 GOLGA8FQ08AF8 430 aa16.47■□□□□ 0.23
SHPK-201ENST00000225519 GOLGA8DPQ0D2H9 430 aa16.47■□□□□ 0.23
SHPK-201ENST00000225519 CCDC158Q5M9N0 1113 aa16.47■□□□□ 0.23
SHPK-201ENST00000225519 ENGASEQ8NFI3 743 aa16.47■□□□□ 0.23
SHPK-201ENST00000225519 RBM33Q96EV2 1170 aaKnown RBP16.47■□□□□ 0.23
SHPK-201ENST00000225519 ADCY9O60503 1353 aa16.47■□□□□ 0.23
SHPK-201ENST00000225519 CBFA2T2O43439 604 aa16.46■□□□□ 0.23
SHPK-201ENST00000225519 PTPN21Q16825 1174 aa16.46■□□□□ 0.23
SHPK-201ENST00000225519 LLPHQ9BRT6 129 aaKnown RBP16.46■□□□□ 0.23
SHPK-201ENST00000225519 KCNQ3O43525 872 aa16.46■□□□□ 0.23
SHPK-201ENST00000225519 GOLGA6L1Q8N7Z2 621 aa16.46■□□□□ 0.23
SHPK-201ENST00000225519 PREX1Q8TCU6 1659 aa16.46■□□□□ 0.23
SHPK-201ENST00000225519 ADD1P35611 737 aaKnown RBP16.46■□□□□ 0.23
SHPK-201ENST00000225519 BICC1Q9H694 974 aaKnown RBP16.46■□□□□ 0.23
SHPK-201ENST00000225519 EIF4A1P60842 406 aaKnown RBP16.45■□□□□ 0.22
SHPK-201ENST00000225519 ATL3Q6DD88 541 aa16.45■□□□□ 0.22
SHPK-201ENST00000225519 OTUD7BQ6GQQ9 843 aa16.45■□□□□ 0.22
SHPK-201ENST00000225519 BABAM1Q9NWV8 329 aa16.45■□□□□ 0.22
SHPK-201ENST00000225519 DBF4Q9UBU7 674 aaPredicted RBP16.45■□□□□ 0.22
SHPK-201ENST00000225519 BTBD11A6QL63 1104 aa16.45■□□□□ 0.22
SHPK-201ENST00000225519 ALDH1L1O75891 902 aa16.45■□□□□ 0.22
SHPK-201ENST00000225519 MTX1Q13505 466 aa16.45■□□□□ 0.22
SHPK-201ENST00000225519 FMR1NBQ8N0W7 255 aaPredicted RBP16.45■□□□□ 0.22
SHPK-201ENST00000225519 PFKFB2O60825 505 aa16.45■□□□□ 0.22
SHPK-201ENST00000225519 CYP21A2P08686 494 aa16.45■□□□□ 0.22
SHPK-201ENST00000225519 ATP1A3P13637 1013 aa16.45■□□□□ 0.22
SHPK-201ENST00000225519 PPP2R3AQ06190 1150 aa16.45■□□□□ 0.22
SHPK-201ENST00000225519 CHST3Q7LGC8 479 aa16.45■□□□□ 0.22
SHPK-201ENST00000225519 SUCLG2Q96I99 432 aa16.45■□□□□ 0.22
SHPK-201ENST00000225519 OVOS2A0A0J9YW53 1432 aa16.45■□□□□ 0.22
SHPK-201ENST00000225519 OVOS2Q6IE36 1432 aa16.45■□□□□ 0.22
SHPK-201ENST00000225519 ADALQ6DHV7 355 aa16.44■□□□□ 0.22
SHPK-201ENST00000225519 CC2D1AQ6P1N0 951 aaPredicted RBP16.44■□□□□ 0.22
SHPK-201ENST00000225519 NPHP4O75161 1426 aaPredicted RBP16.44■□□□□ 0.22
SHPK-201ENST00000225519 RIMS1Q86UR5 1692 aaKnown RBP16.44■□□□□ 0.22
SHPK-201ENST00000225519 MYO1CO00159 1063 aa16.44■□□□□ 0.22
SHPK-201ENST00000225519 TRIM66O15016 1216 aa16.44■□□□□ 0.22
SHPK-201ENST00000225519 ATP8B1O43520 1251 aa16.44■□□□□ 0.22
SHPK-201ENST00000225519 NLRP12P59046 1061 aa16.44■□□□□ 0.22
SHPK-201ENST00000225519 IRX3P78415 501 aaPredicted RBP16.44■□□□□ 0.22
SHPK-201ENST00000225519 HSP90AA4PQ58FG1 418 aa16.44■□□□□ 0.22
SHPK-201ENST00000225519 DHX32Q7L7V1 743 aaKnown RBP16.44■□□□□ 0.22
SHPK-201ENST00000225519 LGR6Q9HBX8 967 aa16.44■□□□□ 0.22
SHPK-201ENST00000225519 GRM8O00222 908 aa16.44■□□□□ 0.22
SHPK-201ENST00000225519 MCM6Q14566 821 aa16.44■□□□□ 0.22
SHPK-201ENST00000225519 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.44■□□□□ 0.22
SHPK-201ENST00000225519 DDX46Q7L014 1031 aaKnown RBP16.43■□□□□ 0.22
SHPK-201ENST00000225519 GPR161Q8N6U8 529 aaKnown RBP16.43■□□□□ 0.22
SHPK-201ENST00000225519 KDRP35968 1356 aa16.43■□□□□ 0.22
SHPK-201ENST00000225519 XRN1Q8IZH2 1706 aaKnown RBP16.43■□□□□ 0.22
SHPK-201ENST00000225519 NRKQ7Z2Y5 1582 aa16.43■□□□□ 0.22
SHPK-201ENST00000225519 PLEKHG3A1L390 1219 aa16.43■□□□□ 0.22
SHPK-201ENST00000225519 SPTLC2O15270 562 aa16.43■□□□□ 0.22
SHPK-201ENST00000225519 HMGB1P09429 215 aaKnown RBP16.43■□□□□ 0.22
SHPK-201ENST00000225519 TSGA10IPQ3SY00 556 aa16.43■□□□□ 0.22
SHPK-201ENST00000225519 OLFM4Q6UX06 510 aa16.43■□□□□ 0.22
SHPK-201ENST00000225519 SMARCC2Q8TAQ2 1214 aa16.43■□□□□ 0.22
SHPK-201ENST00000225519 MED23Q9ULK4 1368 aa16.43■□□□□ 0.22
SHPK-201ENST00000225519 ZNF202O95125 648 aa16.43■□□□□ 0.22
SHPK-201ENST00000225519 TBC1D8O95759 1140 aa16.43■□□□□ 0.22
SHPK-201ENST00000225519 NOM1Q5C9Z4 860 aaKnown RBP16.43■□□□□ 0.22
SHPK-201ENST00000225519 KSR2Q6VAB6 950 aa16.43■□□□□ 0.22
SHPK-201ENST00000225519 KCNG4Q8TDN1 519 aa16.43■□□□□ 0.22
SHPK-201ENST00000225519 C8orf76Q96K31 380 aa16.43■□□□□ 0.22
SHPK-201ENST00000225519 SLC26A8Q96RN1 970 aa16.43■□□□□ 0.22
SHPK-201ENST00000225519 USP6P35125 1406 aa16.42■□□□□ 0.22
SHPK-201ENST00000225519 SASH3O75995 380 aa16.42■□□□□ 0.22
SHPK-201ENST00000225519 KCNJ6P48051 423 aa16.42■□□□□ 0.22
SHPK-201ENST00000225519 MUM1L1Q5H9M0 696 aa16.42■□□□□ 0.22
SHPK-201ENST00000225519 DDX58O95786 925 aaKnown RBP16.42■□□□□ 0.22
SHPK-201ENST00000225519 MCMDC2Q4G0Z9 681 aa16.42■□□□□ 0.22
SHPK-201ENST00000225519 MPHOSPH8Q99549 860 aa16.42■□□□□ 0.22
SHPK-201ENST00000225519 VPS18Q9P253 973 aa16.42■□□□□ 0.22
SHPK-201ENST00000225519 CHGBP05060 677 aa16.42■□□□□ 0.22
SHPK-201ENST00000225519 RIC3Q7Z5B4 369 aa16.42■□□□□ 0.22
SHPK-201ENST00000225519 CLIC4Q9Y696 253 aa16.42■□□□□ 0.22
SHPK-201ENST00000225519 CPLX1O14810 134 aa16.41■□□□□ 0.22
SHPK-201ENST00000225519 CCDC12Q8WUD4 166 aaPredicted RBP16.41■□□□□ 0.22
SHPK-201ENST00000225519 GOLGA1Q92805 767 aa16.41■□□□□ 0.22
SHPK-201ENST00000225519 PARD6BQ9BYG5 372 aa16.41■□□□□ 0.22
SHPK-201ENST00000225519 PPP2R2CQ9Y2T4 447 aa16.41■□□□□ 0.22
SHPK-201ENST00000225519 DIP2CQ9Y2E4 1556 aa16.41■□□□□ 0.22
SHPK-201ENST00000225519 CEP170BQ9Y4F5 1589 aaPredicted RBP16.41■□□□□ 0.22
SHPK-201ENST00000225519 CHMP4CQ96CF2 233 aa16.41■□□□□ 0.22
SHPK-201ENST00000225519 ADAM21Q9UKJ8 722 aa16.41■□□□□ 0.22
SHPK-201ENST00000225519 PARP3Q9Y6F1 533 aa16.41■□□□□ 0.22
SHPK-201ENST00000225519 MARCKSP29966 332 aaPredicted RBP16.41■□□□□ 0.22
SHPK-201ENST00000225519 KARSQ15046 597 aaKnown RBP16.41■□□□□ 0.22
SHPK-201ENST00000225519 GOLGA5Q8TBA6 731 aa16.41■□□□□ 0.22
SHPK-201ENST00000225519 HOXC9P31274 260 aa16.4■□□□□ 0.22
SHPK-201ENST00000225519 MPRIPQ6WCQ1 1025 aa16.4■□□□□ 0.22
SHPK-201ENST00000225519 TRIM65Q6PJ69 517 aa16.4■□□□□ 0.22
SHPK-201ENST00000225519 RAB11FIP4Q86YS3 637 aa16.4■□□□□ 0.22
SHPK-201ENST00000225519 RTEL1Q9NZ71 1219 aa16.4■□□□□ 0.22
SHPK-201ENST00000225519 A2ML1A8K2U0 1454 aa16.4■□□□□ 0.22
SHPK-201ENST00000225519 USP31Q70CQ4 1352 aa16.4■□□□□ 0.22
SHPK-201ENST00000225519 A0A1W2PQ27 194 aa16.4■□□□□ 0.22
SHPK-201ENST00000225519 A0A1W2PQ64 194 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms