RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 SASS6Q6UVJ0 657 aa17.22■□□□□ 0.35
CNOT3-201ENST00000221232 FAM200AQ8TCP9 573 aa17.22■□□□□ 0.35
CNOT3-201ENST00000221232 SH3TC1Q8TE82 1336 aa17.21■□□□□ 0.35
CNOT3-201ENST00000221232 ADAMTSL3P82987 1691 aa17.21■□□□□ 0.35
CNOT3-201ENST00000221232 NRBP1Q9UHY1 535 aa17.21■□□□□ 0.35
CNOT3-201ENST00000221232 ELP1O95163 1332 aa17.21■□□□□ 0.35
CNOT3-201ENST00000221232 PTGS1P23219 599 aa17.21■□□□□ 0.35
CNOT3-201ENST00000221232 PDIA3P30101 505 aaKnown RBP17.21■□□□□ 0.35
CNOT3-201ENST00000221232 TCIRG1Q13488 830 aa17.21■□□□□ 0.35
CNOT3-201ENST00000221232 HLFQ16534 295 aa17.21■□□□□ 0.35
CNOT3-201ENST00000221232 TRIM5Q9C035 493 aa17.21■□□□□ 0.35
CNOT3-201ENST00000221232 KCNF1Q9H3M0 494 aa17.21■□□□□ 0.35
CNOT3-201ENST00000221232 CAMTA1Q9Y6Y1 1673 aa17.21■□□□□ 0.34
CNOT3-201ENST00000221232 ALS2Q96Q42 1657 aa17.2■□□□□ 0.34
CNOT3-201ENST00000221232 EXOSC10Q01780 885 aaKnown RBP17.2■□□□□ 0.34
CNOT3-201ENST00000221232 USP28Q96RU2 1077 aa17.2■□□□□ 0.34
CNOT3-201ENST00000221232 DSCC1Q9BVC3 393 aa17.2■□□□□ 0.34
CNOT3-201ENST00000221232 PUS7LQ9H0K6 701 aaKnown RBP17.2■□□□□ 0.34
CNOT3-201ENST00000221232 CCAR1Q8IX12 1150 aaKnown RBP17.2■□□□□ 0.34
CNOT3-201ENST00000221232 PIBF1Q8WXW3 757 aa17.2■□□□□ 0.34
CNOT3-201ENST00000221232 CLSTN2Q9H4D0 955 aa17.2■□□□□ 0.34
CNOT3-201ENST00000221232 DENND2AQ9ULE3 1009 aa17.2■□□□□ 0.34
CNOT3-201ENST00000221232 POLR3DP05423 398 aaPredicted RBP17.19■□□□□ 0.34
CNOT3-201ENST00000221232 MRC1P22897 1456 aa17.19■□□□□ 0.34
CNOT3-201ENST00000221232 HMGB1P09429 215 aaKnown RBP17.19■□□□□ 0.34
CNOT3-201ENST00000221232 ZNF165P49910 485 aa17.19■□□□□ 0.34
CNOT3-201ENST00000221232 IFIT5Q13325 482 aaKnown RBP17.19■□□□□ 0.34
CNOT3-201ENST00000221232 PIGBQ92521 554 aa17.19■□□□□ 0.34
CNOT3-201ENST00000221232 CFAP45Q9UL16 551 aa17.19■□□□□ 0.34
CNOT3-201ENST00000221232 ADAMTS7Q9UKP4 1686 aa17.19■□□□□ 0.34
CNOT3-201ENST00000221232 FGAP02671 866 aa17.18■□□□□ 0.34
CNOT3-201ENST00000221232 ME1P48163 572 aa17.18■□□□□ 0.34
CNOT3-201ENST00000221232 LRMPQ12912 555 aa17.18■□□□□ 0.34
CNOT3-201ENST00000221232 METTL24Q5JXM2 366 aa17.18■□□□□ 0.34
CNOT3-201ENST00000221232 HELBQ8NG08 1087 aaPredicted RBP17.18■□□□□ 0.34
CNOT3-201ENST00000221232 SMARCC2Q8TAQ2 1214 aa17.18■□□□□ 0.34
CNOT3-201ENST00000221232 BCL11BQ9C0K0 894 aaPredicted RBP17.18■□□□□ 0.34
CNOT3-201ENST00000221232 SLAIN2Q9P270 581 aa17.18■□□□□ 0.34
CNOT3-201ENST00000221232 LDHAL6AQ6ZMR3 332 aa17.18■□□□□ 0.34
CNOT3-201ENST00000221232 CCDC186Q7Z3E2 898 aa17.18■□□□□ 0.34
CNOT3-201ENST00000221232 GOLPH3LQ9H4A5 285 aa17.18■□□□□ 0.34
CNOT3-201ENST00000221232 DDX19AQ9NUU7 478 aaKnown RBP17.18■□□□□ 0.34
CNOT3-201ENST00000221232 AFDNP55196 1824 aaKnown RBP17.18■□□□□ 0.34
CNOT3-201ENST00000221232 KAT6BQ8WYB5 2073 aa17.18■□□□□ 0.34
CNOT3-201ENST00000221232 ADD1P35611 737 aaKnown RBP17.18■□□□□ 0.34
CNOT3-201ENST00000221232 KIF6Q6ZMV9 814 aa17.18■□□□□ 0.34
CNOT3-201ENST00000221232 ZSCAN16Q9H4T2 348 aaPredicted RBP17.18■□□□□ 0.34
CNOT3-201ENST00000221232 APPP05067 770 aa17.17■□□□□ 0.34
CNOT3-201ENST00000221232 RXRAP19793 462 aa17.17■□□□□ 0.34
CNOT3-201ENST00000221232 ISCA1Q9BUE6 129 aa17.17■□□□□ 0.34
CNOT3-201ENST00000221232 GREM2Q9H772 168 aa17.17■□□□□ 0.34
CNOT3-201ENST00000221232 GPR108Q9NPR9 543 aa17.17■□□□□ 0.34
CNOT3-201ENST00000221232 KIF1AQ12756 1690 aa17.17■□□□□ 0.34
CNOT3-201ENST00000221232 SNAP23O00161 211 aa17.17■□□□□ 0.34
CNOT3-201ENST00000221232 PDIA4P13667 645 aaKnown RBP17.17■□□□□ 0.34
CNOT3-201ENST00000221232 CNNM1Q9NRU3 951 aa17.17■□□□□ 0.34
CNOT3-201ENST00000221232 PALLDQ8WX93 1383 aa17.16■□□□□ 0.34
CNOT3-201ENST00000221232 COL18A1P39060 1754 aa17.16■□□□□ 0.34
CNOT3-201ENST00000221232 TBC1D2BQ9UPU7 963 aa17.16■□□□□ 0.34
CNOT3-201ENST00000221232 FOXP2O15409 715 aa17.16■□□□□ 0.34
CNOT3-201ENST00000221232 FDPSP14324 419 aaKnown RBP17.16■□□□□ 0.34
CNOT3-201ENST00000221232 STK11IPQ8N1F8 1099 aa17.16■□□□□ 0.34
CNOT3-201ENST00000221232 CARD10Q9BWT7 1032 aa17.16■□□□□ 0.34
CNOT3-201ENST00000221232 CPDO75976 1380 aa17.16■□□□□ 0.34
CNOT3-201ENST00000221232 KLF18A0A0U1RQI7 1052 aa17.15■□□□□ 0.34
CNOT3-201ENST00000221232 PRC1O43663 620 aa17.15■□□□□ 0.34
CNOT3-201ENST00000221232 IDH1O75874 414 aaKnown RBP17.15■□□□□ 0.34
CNOT3-201ENST00000221232 ITGA6P23229 1130 aa17.15■□□□□ 0.34
CNOT3-201ENST00000221232 NKX2-3Q8TAU0 364 aa17.15■□□□□ 0.34
CNOT3-201ENST00000221232 INCENPQ9NQS7 918 aa17.15■□□□□ 0.34
CNOT3-201ENST00000221232 IMMTQ16891 758 aaKnown RBP17.15■□□□□ 0.34
CNOT3-201ENST00000221232 CCDC144CPQ8IYA2 1237 aa17.15■□□□□ 0.34
CNOT3-201ENST00000221232 CIAO1O76071 339 aa17.14■□□□□ 0.34
CNOT3-201ENST00000221232 ATP2B3Q16720 1220 aa17.14■□□□□ 0.34
CNOT3-201ENST00000221232 C11orf57Q6ZUT1 292 aaPredicted RBP17.14■□□□□ 0.34
CNOT3-201ENST00000221232 LLPHQ9BRT6 129 aaKnown RBP17.14■□□□□ 0.34
CNOT3-201ENST00000221232 AKAP2Q9Y2D5 859 aa17.14■□□□□ 0.34
CNOT3-201ENST00000221232 ARFGEF2Q9Y6D5 1785 aa17.14■□□□□ 0.34
CNOT3-201ENST00000221232 A0A1B0GVL5 298 aa17.14■□□□□ 0.33
CNOT3-201ENST00000221232 GOLGA8BA8MQT2 603 aa17.14■□□□□ 0.33
CNOT3-201ENST00000221232 GPAA1O43292 621 aa17.14■□□□□ 0.33
CNOT3-201ENST00000221232 HMGN5P82970 282 aaKnown RBP17.14■□□□□ 0.33
CNOT3-201ENST00000221232 ILDR1Q86SU0 546 aaPredicted RBP17.14■□□□□ 0.33
CNOT3-201ENST00000221232 FSIP1Q8NA03 581 aa17.14■□□□□ 0.33
CNOT3-201ENST00000221232 ATG3Q9NT62 314 aa17.14■□□□□ 0.33
CNOT3-201ENST00000221232 BTG4Q9NY30 223 aa17.14■□□□□ 0.33
CNOT3-201ENST00000221232 GOLGA6L6A8MZA4 724 aa17.13■□□□□ 0.33
CNOT3-201ENST00000221232 ZNF213O14771 459 aa17.13■□□□□ 0.33
CNOT3-201ENST00000221232 MCAMP43121 646 aa17.13■□□□□ 0.33
CNOT3-201ENST00000221232 NKX1-1Q15270 411 aaPredicted RBP17.13■□□□□ 0.33
CNOT3-201ENST00000221232 SLC9C2Q5TAH2 1124 aa17.13■□□□□ 0.33
CNOT3-201ENST00000221232 CCDC73Q6ZRK6 1079 aa17.13■□□□□ 0.33
CNOT3-201ENST00000221232 KIAA1524Q8TCG1 905 aa17.13■□□□□ 0.33
CNOT3-201ENST00000221232 TRMT112Q9UI30 125 aaKnown RBP17.13■□□□□ 0.33
CNOT3-201ENST00000221232 ZNF335Q9H4Z2 1342 aaPredicted RBP17.13■□□□□ 0.33
CNOT3-201ENST00000221232 CPLX1O14810 134 aa17.13■□□□□ 0.33
CNOT3-201ENST00000221232 SF3A1Q15459 793 aaKnown RBP17.13■□□□□ 0.33
CNOT3-201ENST00000221232 NAA16Q6N069 864 aaPredicted RBP17.13■□□□□ 0.33
CNOT3-201ENST00000221232 RALYLQ86SE5 291 aaKnown RBP17.13■□□□□ 0.33
CNOT3-201ENST00000221232 ZBTB38Q8NAP3 1195 aaPredicted RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms