RNA–Protein interactions for RNA: ENST00000638159.1

GABRA1-220, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5 BASIC

Gene GABRA1, Length 4,088 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-220ENST00000638159 TMEM38BQ9NVV0 291 aa3.6□□□□□ -1.83
GABRA1-220ENST00000638159 PFDN2Q9UHV9 154 aa3.6□□□□□ -1.83
GABRA1-220ENST00000638159 DTX4Q9Y2E6 619 aa3.6□□□□□ -1.83
GABRA1-220ENST00000638159 PRSS29PA6NIE9 313 aa3.59□□□□□ -1.83
GABRA1-220ENST00000638159 EPM2AB3EWF7 344 aa3.59□□□□□ -1.83
GABRA1-220ENST00000638159 SCTP09683 121 aa3.59□□□□□ -1.83
GABRA1-220ENST00000638159 CD1DP15813 335 aa3.59□□□□□ -1.83
GABRA1-220ENST00000638159 CALCRP30988 508 aa3.59□□□□□ -1.83
GABRA1-220ENST00000638159 ALG10Q5BKT4 473 aa3.59□□□□□ -1.83
GABRA1-220ENST00000638159 FGD3Q5JSP0 725 aa3.59□□□□□ -1.83
GABRA1-220ENST00000638159 MRPL2Q5T653 305 aaKnown RBP3.59□□□□□ -1.83
GABRA1-220ENST00000638159 PRAMEF6Q5VXH4 476 aa3.59□□□□□ -1.83
GABRA1-220ENST00000638159 CGB2Q6NT52 195 aa3.59□□□□□ -1.83
GABRA1-220ENST00000638159 CMC1Q7Z7K0 106 aa3.59□□□□□ -1.83
GABRA1-220ENST00000638159 CCDC54Q8NEL0 328 aa3.59□□□□□ -1.83
GABRA1-220ENST00000638159 FBXO25Q8TCJ0 367 aa3.59□□□□□ -1.83
GABRA1-220ENST00000638159 LIPHQ8WWY8 451 aa3.59□□□□□ -1.83
GABRA1-220ENST00000638159 ZIM3Q96PE6 472 aa3.59□□□□□ -1.83
GABRA1-220ENST00000638159 OR52E6Q96RD3 313 aa3.59□□□□□ -1.83
GABRA1-220ENST00000638159 SH3GL1Q99961 368 aa3.59□□□□□ -1.83
GABRA1-220ENST00000638159 NKIRAS1Q9NYS0 192 aa3.59□□□□□ -1.83
GABRA1-220ENST00000638159 TCF19Q9Y242 345 aa3.59□□□□□ -1.83
GABRA1-220ENST00000638159 CCDC88CQ9P219 2028 aa3.59□□□□□ -1.83
GABRA1-220ENST00000638159 NIPBLQ6KC79 2804 aaeCLIP3.59□□□□□ -1.83
GABRA1-220ENST00000638159 A0A087WUV0 522 aaPredicted RBP3.59□□□□□ -1.83
GABRA1-220ENST00000638159 IGLV3-32A0A0A0MS00 114 aa3.59□□□□□ -1.83
GABRA1-220ENST00000638159 GMDSO60547 372 aa3.59□□□□□ -1.83
GABRA1-220ENST00000638159 H2BFMP0C1H6 154 aa3.59□□□□□ -1.83
GABRA1-220ENST00000638159 KRT4P19013 534 aa3.59□□□□□ -1.83
GABRA1-220ENST00000638159 CD81P60033 236 aa3.59□□□□□ -1.83
GABRA1-220ENST00000638159 PSG6Q00889 435 aa3.59□□□□□ -1.83
GABRA1-220ENST00000638159 BNIP2Q12982 314 aa3.59□□□□□ -1.83
GABRA1-220ENST00000638159 APOFQ13790 326 aa3.59□□□□□ -1.83
GABRA1-220ENST00000638159 GALEQ14376 348 aa3.59□□□□□ -1.83
GABRA1-220ENST00000638159 LTC4SQ16873 150 aa3.59□□□□□ -1.83
GABRA1-220ENST00000638159 FAM106AQ4KMX7 169 aa3.59□□□□□ -1.83
GABRA1-220ENST00000638159 SAMD4BQ5PRF9 694 aaKnown RBP3.59□□□□□ -1.83
GABRA1-220ENST00000638159 PLCXD3Q63HM9 321 aa3.59□□□□□ -1.83
GABRA1-220ENST00000638159 CBLN3Q6UW01 205 aa3.59□□□□□ -1.83
GABRA1-220ENST00000638159 OR11H1Q8NG94 326 aa3.59□□□□□ -1.83
GABRA1-220ENST00000638159 TAF15Q92804 592 aaKnown RBP eCLIP3.59□□□□□ -1.83
GABRA1-220ENST00000638159 RNPEPL1Q9HAU8 725 aa3.59□□□□□ -1.83
GABRA1-220ENST00000638159 GID8Q9NWU2 228 aa3.59□□□□□ -1.83
GABRA1-220ENST00000638159 ZIM2Q9NZV7 527 aa3.59□□□□□ -1.83
GABRA1-220ENST00000638159 IKZF2Q9UKS7 526 aa3.59□□□□□ -1.83
GABRA1-220ENST00000638159 IGHV3OR15-7A0A075B7D8 119 aa3.59□□□□□ -1.84
GABRA1-220ENST00000638159 PRSS51A0A1B0GVH4 220 aa3.59□□□□□ -1.84
GABRA1-220ENST00000638159 ZSCAN5BA6NJL1 495 aa3.59□□□□□ -1.84
GABRA1-220ENST00000638159 FAM107AO95990 144 aa3.59□□□□□ -1.84
GABRA1-220ENST00000638159 THBS1P07996 1170 aa3.59□□□□□ -1.84
GABRA1-220ENST00000638159 P0DMU3 169 aa3.59□□□□□ -1.84
GABRA1-220ENST00000638159 FAM231AP0DMU4 169 aa3.59□□□□□ -1.84
GABRA1-220ENST00000638159 FAM231CP0DMU5 169 aa3.59□□□□□ -1.84
GABRA1-220ENST00000638159 LAP3P28838 519 aa3.59□□□□□ -1.84
GABRA1-220ENST00000638159 C21orf33P30042 268 aaPredicted RBP3.59□□□□□ -1.84
GABRA1-220ENST00000638159 GLP1RP43220 463 aa3.59□□□□□ -1.84
GABRA1-220ENST00000638159 SMIM11AP58511 58 aa3.59□□□□□ -1.84
GABRA1-220ENST00000638159 MADCAM1Q13477 382 aa3.59□□□□□ -1.84
GABRA1-220ENST00000638159 SLC25A30Q5SVS4 291 aa3.59□□□□□ -1.84
GABRA1-220ENST00000638159 ZNF684Q5T5D7 378 aa3.59□□□□□ -1.84
GABRA1-220ENST00000638159 TEDDM1Q5T9Z0 273 aa3.59□□□□□ -1.84
GABRA1-220ENST00000638159 RNLSQ5VYX0 342 aa3.59□□□□□ -1.84
GABRA1-220ENST00000638159 C19orf18Q8NEA5 215 aa3.59□□□□□ -1.84
GABRA1-220ENST00000638159 OR1F12Q8NHA8 337 aa3.59□□□□□ -1.84
GABRA1-220ENST00000638159 C2CD4CQ8TF44 421 aa3.59□□□□□ -1.84
GABRA1-220ENST00000638159 CNOT9Q92600 299 aaKnown RBP3.59□□□□□ -1.84
GABRA1-220ENST00000638159 PBOV1Q9GZY1 135 aa3.59□□□□□ -1.84
GABRA1-220ENST00000638159 TMEM5Q9Y2B1 443 aa3.59□□□□□ -1.84
GABRA1-220ENST00000638159 SAR1BQ9Y6B6 198 aa3.59□□□□□ -1.84
GABRA1-220ENST00000638159 CENPVL1A0A0U1RR11 272 aa3.58□□□□□ -1.84
GABRA1-220ENST00000638159 CENPVL3A0A0U1RRI6 287 aa3.58□□□□□ -1.84
GABRA1-220ENST00000638159 TMEM72A0PK05 275 aa3.58□□□□□ -1.84
GABRA1-220ENST00000638159 PSCAO43653 123 aa3.58□□□□□ -1.84
GABRA1-220ENST00000638159 SNAP29O95721 258 aa3.58□□□□□ -1.84
GABRA1-220ENST00000638159 GKN3PP0CG01 181 aa3.58□□□□□ -1.84
GABRA1-220ENST00000638159 PGA5P0DJD9 388 aa3.58□□□□□ -1.84
GABRA1-220ENST00000638159 ACADSP16219 412 aa3.58□□□□□ -1.84
GABRA1-220ENST00000638159 LUMP51884 338 aaPredicted RBP3.58□□□□□ -1.84
GABRA1-220ENST00000638159 KRT71Q3SY84 523 aa3.58□□□□□ -1.84
GABRA1-220ENST00000638159 LIPKQ5VXJ0 399 aa3.58□□□□□ -1.84
GABRA1-220ENST00000638159 C9orf139Q6ZV77 190 aa3.58□□□□□ -1.84
GABRA1-220ENST00000638159 MOB3CQ70IA8 216 aa3.58□□□□□ -1.84
GABRA1-220ENST00000638159 OR2W3Q7Z3T1 314 aa3.58□□□□□ -1.84
GABRA1-220ENST00000638159 MRPL41Q8IXM3 137 aaKnown RBP3.58□□□□□ -1.84
GABRA1-220ENST00000638159 OR6V1Q8N148 313 aa3.58□□□□□ -1.84
GABRA1-220ENST00000638159 OR2L13Q8N349 312 aa3.58□□□□□ -1.84
GABRA1-220ENST00000638159 NABP1Q96AH0 204 aa3.58□□□□□ -1.84
GABRA1-220ENST00000638159 AJUBAQ96IF1 538 aa3.58□□□□□ -1.84
GABRA1-220ENST00000638159 DMRTB1Q96MA1 342 aa3.58□□□□□ -1.84
GABRA1-220ENST00000638159 ZNF714Q96N38 554 aa3.58□□□□□ -1.84
GABRA1-220ENST00000638159 SDF2Q99470 211 aa3.58□□□□□ -1.84
GABRA1-220ENST00000638159 C1orf50Q9BV19 199 aa3.58□□□□□ -1.84
GABRA1-220ENST00000638159 PRRG3Q9BZD7 231 aa3.58□□□□□ -1.84
GABRA1-220ENST00000638159 WDR55Q9H6Y2 383 aaPredicted RBP3.58□□□□□ -1.84
GABRA1-220ENST00000638159 PROK2Q9HC23 129 aa3.58□□□□□ -1.84
GABRA1-220ENST00000638159 SESN1Q9Y6P5 492 aa3.58□□□□□ -1.84
GABRA1-220ENST00000638159 A0A0G2JPF8 293 aa3.58□□□□□ -1.84
GABRA1-220ENST00000638159 TMEM120BA0PK00 339 aa3.58□□□□□ -1.84
GABRA1-220ENST00000638159 CCDC154A6NI56 674 aa3.58□□□□□ -1.84
GABRA1-220ENST00000638159 HNRNPCL2B2RXH8 293 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms