RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 FAM71CQ8NEG0 241 aa4.9□□□□□ -1.62
CHD2-227ENST00000637572 OR6K3Q8NGY3 331 aa4.9□□□□□ -1.62
CHD2-227ENST00000637572 PHB2Q99623 299 aa4.9□□□□□ -1.62
CHD2-227ENST00000637572 SELENOIQ9C0D9 397 aa4.9□□□□□ -1.62
CHD2-227ENST00000637572 PARD6AQ9NPB6 346 aa4.9□□□□□ -1.62
CHD2-227ENST00000637572 IL17BQ9UHF5 180 aa4.9□□□□□ -1.62
CHD2-227ENST00000637572 SLC22A13Q9Y226 551 aa4.9□□□□□ -1.62
CHD2-227ENST00000637572 IGLV3-32A0A0A0MS00 114 aa4.9□□□□□ -1.62
CHD2-227ENST00000637572 IFITM5A6NNB3 132 aa4.9□□□□□ -1.62
CHD2-227ENST00000637572 C9orf172C9J069 976 aa4.9□□□□□ -1.62
CHD2-227ENST00000637572 DHRS3O75911 302 aa4.9□□□□□ -1.62
CHD2-227ENST00000637572 LIMS3P0CW19 117 aa4.9□□□□□ -1.62
CHD2-227ENST00000637572 LIMS4P0CW20 117 aa4.9□□□□□ -1.62
CHD2-227ENST00000637572 FXYD6P3P58550 94 aa4.9□□□□□ -1.62
CHD2-227ENST00000637572 EXOSC6Q5RKV6 272 aaKnown RBP4.9□□□□□ -1.62
CHD2-227ENST00000637572 C1QTNF12Q5T7M4 302 aa4.9□□□□□ -1.62
CHD2-227ENST00000637572 C1orf185Q5T7R7 199 aa4.9□□□□□ -1.62
CHD2-227ENST00000637572 TSEN54Q7Z6J9 526 aaKnown RBP4.9□□□□□ -1.62
CHD2-227ENST00000637572 PARP16Q8N5Y8 322 aa4.9□□□□□ -1.62
CHD2-227ENST00000637572 OR4M1Q8NGD0 313 aa4.9□□□□□ -1.62
CHD2-227ENST00000637572 FNDC9Q8TBE3 224 aa4.9□□□□□ -1.62
CHD2-227ENST00000637572 CA5BP1Q8WTZ4 195 aa4.9□□□□□ -1.62
CHD2-227ENST00000637572 SLC6A7Q99884 636 aa4.9□□□□□ -1.62
CHD2-227ENST00000637572 SLC25A21Q9BQT8 299 aaPredicted RBP4.9□□□□□ -1.62
CHD2-227ENST00000637572 NICN1Q9BSH3 213 aa4.9□□□□□ -1.62
CHD2-227ENST00000637572 SYNPO2LQ9H987 977 aa4.9□□□□□ -1.62
CHD2-227ENST00000637572 TMEM100Q9NV29 134 aa4.9□□□□□ -1.62
CHD2-227ENST00000637572 RHBDD3Q9Y3P4 386 aa4.9□□□□□ -1.62
CHD2-227ENST00000637572 MPC1Q9Y5U8 109 aa4.9□□□□□ -1.62
CHD2-227ENST00000637572 PCNX2A6NKB5 2137 aa4.9□□□□□ -1.63
CHD2-227ENST00000637572 CACNA1DQ01668 2161 aa4.9□□□□□ -1.63
CHD2-227ENST00000637572 ZC3H12DA2A288 527 aaKnown RBP4.9□□□□□ -1.63
CHD2-227ENST00000637572 M0R1B8 84 aa4.9□□□□□ -1.63
CHD2-227ENST00000637572 ATF1P18846 271 aa4.9□□□□□ -1.63
CHD2-227ENST00000637572 CATR1Q13166 79 aa4.9□□□□□ -1.63
CHD2-227ENST00000637572 CDK10Q15131 360 aa4.9□□□□□ -1.63
CHD2-227ENST00000637572 TMEM177Q53S58 311 aa4.9□□□□□ -1.63
CHD2-227ENST00000637572 SLC25A53Q5H9E4 307 aa4.9□□□□□ -1.63
CHD2-227ENST00000637572 OR2W3Q7Z3T1 314 aa4.9□□□□□ -1.63
CHD2-227ENST00000637572 CDC20BQ86Y33 519 aa4.9□□□□□ -1.63
CHD2-227ENST00000637572 ZNF611Q8N823 705 aa4.9□□□□□ -1.63
CHD2-227ENST00000637572 SLC30A7Q8NEW0 376 aa4.9□□□□□ -1.63
CHD2-227ENST00000637572 KCNJ16Q9NPI9 418 aa4.9□□□□□ -1.63
CHD2-227ENST00000637572 ZFC3H1O60293 1989 aaKnown RBP4.9□□□□□ -1.63
CHD2-227ENST00000637572 NUP214P35658 2090 aaPredicted RBP4.89□□□□□ -1.63
CHD2-227ENST00000637572 A0A0J9YW62 118 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 OR5B21A6NL26 309 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 GABARAPH6UMI1 98 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 SLC17A2O00624 439 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 CTDSP2O14595 271 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 TERTO14746 1132 aaKnown RBP4.89□□□□□ -1.63
CHD2-227ENST00000637572 SH2D1BO14796 132 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 GPX5O75715 221 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 SLC2A1P11166 492 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 SNRPBP14678 240 aaKnown RBP4.89□□□□□ -1.63
CHD2-227ENST00000637572 ZNF32P17041 273 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 IL3RAP26951 378 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 PTH2RP49190 550 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 VEGFCP49767 419 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 SNU13P55769 128 aaKnown RBP4.89□□□□□ -1.63
CHD2-227ENST00000637572 GFRA1P56159 465 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 ERVK-16P61578 105 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 GNG3P63215 75 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 RBMS2Q15434 407 aaKnown RBP4.89□□□□□ -1.63
CHD2-227ENST00000637572 TEX30Q5JUR7 227 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 ZBTB37Q5TC79 503 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 FAM27BQ5VT28 67 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 GSG1LQ6UXU4 331 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 STAC2Q6ZMT1 411 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 FAM214BQ7L5A3 538 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 PRSS35Q8N3Z0 413 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 OR51D1Q8NGF3 324 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 OR13G1Q8NGZ3 307 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 OR56B4Q8NH76 319 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 PELI1Q96FA3 418 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 FANCD2OSQ96PS1 177 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 ZNF416Q9BWM5 594 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 PRDM14Q9GZV8 571 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 PPA2Q9H2U2 334 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 ZNF71Q9NQZ8 489 aaPredicted RBP4.89□□□□□ -1.63
CHD2-227ENST00000637572 TAS2R4Q9NYW5 299 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 SPINT2O43291 252 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 IGHMP01871 453 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 GLAP06280 429 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 SERPINE2P07093 398 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 UMODP07911 640 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 PPP3CBP16298 524 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 RPS19P39019 145 aaKnown RBP4.89□□□□□ -1.63
CHD2-227ENST00000637572 PMPCAQ10713 525 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 KLRB1Q12918 225 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 ZNF239Q16600 458 aaKnown RBP4.89□□□□□ -1.63
CHD2-227ENST00000637572 PABPC1L2AQ5JQF8 200 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 KANSL1Q7Z3B3 1105 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 SLC38A9Q8NBW4 561 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 OR1J1Q8NGS3 322 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 RNF133Q8WVZ7 376 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 EMG1Q92979 244 aaKnown RBP4.89□□□□□ -1.63
CHD2-227ENST00000637572 MRPS24Q96EL2 167 aaKnown RBP4.89□□□□□ -1.63
CHD2-227ENST00000637572 ST6GALNAC5Q9BVH7 336 aa4.89□□□□□ -1.63
CHD2-227ENST00000637572 GPR35Q9HC97 309 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms