RNA–Protein interactions for RNA: ENST00000590792.1

CCDC58P3-201, Transcript of coiled-coil domain containing 58 pseudogene 3, humanhuman

BASIC

Gene CCDC58P3, Length 430 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58P3-201ENST00000590792 ZNF223Q9UK11 482 aaPredicted RBP3.2□□□□□ -1.9
CCDC58P3-201ENST00000590792 ZNF490Q9ULM2 529 aaPredicted RBP3.2□□□□□ -1.9
CCDC58P3-201ENST00000590792 FOXJ3Q9UPW0 622 aa3.2□□□□□ -1.9
CCDC58P3-201ENST00000590792 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.2□□□□□ -1.9
CCDC58P3-201ENST00000590792 SOX21Q9Y651 276 aaPredicted RBP3.2□□□□□ -1.9
CCDC58P3-201ENST00000590792 CLCA3PQ9Y6N3 262 aa3.2□□□□□ -1.9
CCDC58P3-201ENST00000590792 A0A0U1RRA0 63 aa3.19□□□□□ -1.9
CCDC58P3-201ENST00000590792 LOC285095A0A1B0GVY8 99 aa3.19□□□□□ -1.9
CCDC58P3-201ENST00000590792 C16orf90A8MZG2 172 aa3.19□□□□□ -1.9
CCDC58P3-201ENST00000590792 WWP2O00308 870 aa3.19□□□□□ -1.9
CCDC58P3-201ENST00000590792 TYROBPO43914 113 aa3.19□□□□□ -1.9
CCDC58P3-201ENST00000590792 TRIM3O75382 744 aaPredicted RBP3.19□□□□□ -1.9
CCDC58P3-201ENST00000590792 NSA2O95478 260 aaKnown RBP3.19□□□□□ -1.9
CCDC58P3-201ENST00000590792 TTC4O95801 387 aa3.19□□□□□ -1.9
CCDC58P3-201ENST00000590792 CT45A10P0DMU9 189 aa3.19□□□□□ -1.9
CCDC58P3-201ENST00000590792 DESP17661 470 aa3.19□□□□□ -1.9
CCDC58P3-201ENST00000590792 MAGEA8P43361 318 aa3.19□□□□□ -1.9
CCDC58P3-201ENST00000590792 CAMLGP49069 296 aa3.19□□□□□ -1.9
CCDC58P3-201ENST00000590792 POU3F4P49335 361 aa3.19□□□□□ -1.9
CCDC58P3-201ENST00000590792 PLTPP55058 493 aa3.19□□□□□ -1.9
CCDC58P3-201ENST00000590792 EIF3EP60228 445 aaKnown RBP3.19□□□□□ -1.9
CCDC58P3-201ENST00000590792 CD47Q08722 323 aa3.19□□□□□ -1.9
CCDC58P3-201ENST00000590792 SLC10A7Q0GE19 358 aa3.19□□□□□ -1.9
CCDC58P3-201ENST00000590792 CASP8Q14790 479 aa3.19□□□□□ -1.9
CCDC58P3-201ENST00000590792 NDUFA9Q16795 377 aa3.19□□□□□ -1.9
CCDC58P3-201ENST00000590792 PARP6Q2NL67 630 aa3.19□□□□□ -1.9
CCDC58P3-201ENST00000590792 LELP1Q5T871 98 aa3.19□□□□□ -1.9
CCDC58P3-201ENST00000590792 STEAP4Q687X5 459 aa3.19□□□□□ -1.9
CCDC58P3-201ENST00000590792 C8orf74Q6P047 294 aa3.19□□□□□ -1.9
CCDC58P3-201ENST00000590792 RANBP3LQ86VV4 465 aaPredicted RBP3.19□□□□□ -1.9
CCDC58P3-201ENST00000590792 WDFY1Q8IWB7 410 aa3.19□□□□□ -1.9
CCDC58P3-201ENST00000590792 IFT20Q8IY31 132 aa3.19□□□□□ -1.9
CCDC58P3-201ENST00000590792 GPR137CQ8N3F9 429 aa3.19□□□□□ -1.9
CCDC58P3-201ENST00000590792 FNDC8Q8TC99 324 aa3.19□□□□□ -1.9
CCDC58P3-201ENST00000590792 TMEM37Q8WXS4 190 aa3.19□□□□□ -1.9
CCDC58P3-201ENST00000590792 PHYHIPQ92561 330 aa3.19□□□□□ -1.9
CCDC58P3-201ENST00000590792 TFGQ92734 400 aaPredicted RBP3.19□□□□□ -1.9
CCDC58P3-201ENST00000590792 IMP4Q96G21 291 aaKnown RBP3.19□□□□□ -1.9
CCDC58P3-201ENST00000590792 HBEGFQ99075 208 aa3.19□□□□□ -1.9
CCDC58P3-201ENST00000590792 LIN28AQ9H9Z2 209 aaKnown RBP3.19□□□□□ -1.9
CCDC58P3-201ENST00000590792 UGT1A10Q9HAW8 530 aa3.19□□□□□ -1.9
CCDC58P3-201ENST00000590792 TMEM165Q9HC07 324 aa3.19□□□□□ -1.9
CCDC58P3-201ENST00000590792 PROK2Q9HC23 129 aa3.19□□□□□ -1.9
CCDC58P3-201ENST00000590792 CNOT2Q9NZN8 540 aaKnown RBP3.19□□□□□ -1.9
CCDC58P3-201ENST00000590792 KLRF1Q9NZS2 232 aa3.19□□□□□ -1.9
CCDC58P3-201ENST00000590792 C15orf41Q9Y2V0 281 aa3.19□□□□□ -1.9
CCDC58P3-201ENST00000590792 FAM220BPB1ANY3 271 aa3.18□□□□□ -1.9
CCDC58P3-201ENST00000590792 C11orf98E9PRG8 122 aa3.18□□□□□ -1.9
CCDC58P3-201ENST00000590792 H0Y9J4 135 aa3.18□□□□□ -1.9
CCDC58P3-201ENST00000590792 H0YGG7 62 aa3.18□□□□□ -1.9
CCDC58P3-201ENST00000590792 H3BQF6 201 aa3.18□□□□□ -1.9
CCDC58P3-201ENST00000590792 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.18□□□□□ -1.9
CCDC58P3-201ENST00000590792 KCNK1O00180 336 aa3.18□□□□□ -1.9
CCDC58P3-201ENST00000590792 TXNDC9O14530 226 aa3.18□□□□□ -1.9
CCDC58P3-201ENST00000590792 EIF3HO15372 352 aaKnown RBP eCLIP3.18□□□□□ -1.9
CCDC58P3-201ENST00000590792 RIPK2O43353 540 aa3.18□□□□□ -1.9
CCDC58P3-201ENST00000590792 LCMT2O60294 686 aaKnown RBP3.18□□□□□ -1.9
CCDC58P3-201ENST00000590792 VPS26AO75436 327 aa3.18□□□□□ -1.9
CCDC58P3-201ENST00000590792 BANF1O75531 89 aa3.18□□□□□ -1.9
CCDC58P3-201ENST00000590792 GCM2O75603 506 aaPredicted RBP3.18□□□□□ -1.9
CCDC58P3-201ENST00000590792 WISP3O95389 354 aaPredicted RBP3.18□□□□□ -1.9
CCDC58P3-201ENST00000590792 AP2A1O95782 977 aa3.18□□□□□ -1.9
CCDC58P3-201ENST00000590792 ECDO95905 644 aaPredicted RBP3.18□□□□□ -1.9
CCDC58P3-201ENST00000590792 SHBGP04278 402 aa3.18□□□□□ -1.9
CCDC58P3-201ENST00000590792 MLNP12872 115 aa3.18□□□□□ -1.9
CCDC58P3-201ENST00000590792 ZNF708P17019 499 aa3.18□□□□□ -1.9
CCDC58P3-201ENST00000590792 TNNI3P19429 210 aa3.18□□□□□ -1.9
CCDC58P3-201ENST00000590792 ASIPP42127 132 aa3.18□□□□□ -1.9
CCDC58P3-201ENST00000590792 LHX2P50458 406 aa3.18□□□□□ -1.9
CCDC58P3-201ENST00000590792 CLDN18P56856 261 aa3.18□□□□□ -1.9
CCDC58P3-201ENST00000590792 TPI1P60174 286 aa3.18□□□□□ -1.9
CCDC58P3-201ENST00000590792 DYNLT1P63172 113 aa3.18□□□□□ -1.9
CCDC58P3-201ENST00000590792 CDK16Q00536 496 aa3.18□□□□□ -1.9
CCDC58P3-201ENST00000590792 CAV1Q03135 178 aa3.18□□□□□ -1.9
CCDC58P3-201ENST00000590792 ACVR1Q04771 509 aa3.18□□□□□ -1.9
CCDC58P3-201ENST00000590792 TRIP13Q15645 432 aaPredicted RBP3.18□□□□□ -1.9
CCDC58P3-201ENST00000590792 C4orf22Q6V702 233 aa3.18□□□□□ -1.9
CCDC58P3-201ENST00000590792 BZW1Q7L1Q6 419 aaKnown RBP3.18□□□□□ -1.9
CCDC58P3-201ENST00000590792 C1orf174Q8IYL3 243 aa3.18□□□□□ -1.9
CCDC58P3-201ENST00000590792 RIBC1Q8N443 379 aaPredicted RBP3.18□□□□□ -1.9
CCDC58P3-201ENST00000590792 FAM83FQ8NEG4 500 aaPredicted RBP3.18□□□□□ -1.9
CCDC58P3-201ENST00000590792 TFB1MQ8WVM0 346 aaKnown RBP3.18□□□□□ -1.9
CCDC58P3-201ENST00000590792 FCGR1BQ92637 280 aa3.18□□□□□ -1.9
CCDC58P3-201ENST00000590792 NCLNQ969V3 563 aa3.18□□□□□ -1.9
CCDC58P3-201ENST00000590792 PINX1Q96BK5 328 aaKnown RBP3.18□□□□□ -1.9
CCDC58P3-201ENST00000590792 TLCD1Q96CP7 247 aa3.18□□□□□ -1.9
CCDC58P3-201ENST00000590792 HAUS1Q96CS2 278 aa3.18□□□□□ -1.9
CCDC58P3-201ENST00000590792 MUCL1Q96DR8 90 aa3.18□□□□□ -1.9
CCDC58P3-201ENST00000590792 DTNBP1Q96EV8 351 aa3.18□□□□□ -1.9
CCDC58P3-201ENST00000590792 SNF8Q96H20 258 aa3.18□□□□□ -1.9
CCDC58P3-201ENST00000590792 SERPINB12Q96P63 405 aa3.18□□□□□ -1.9
CCDC58P3-201ENST00000590792 VAT1Q99536 393 aa3.18□□□□□ -1.9
CCDC58P3-201ENST00000590792 KIFC1Q9BW19 673 aa3.18□□□□□ -1.9
CCDC58P3-201ENST00000590792 SLC25A51Q9H1U9 297 aa3.18□□□□□ -1.9
CCDC58P3-201ENST00000590792 OR52A5Q9H2C5 316 aa3.18□□□□□ -1.9
CCDC58P3-201ENST00000590792 DPH5Q9H2P9 285 aa3.18□□□□□ -1.9
CCDC58P3-201ENST00000590792 ALG9Q9H6U8 611 aa3.18□□□□□ -1.9
CCDC58P3-201ENST00000590792 TREX1Q9NSU2 369 aa3.18□□□□□ -1.9
CCDC58P3-201ENST00000590792 MIOXQ9UGB7 285 aa3.18□□□□□ -1.9
CCDC58P3-201ENST00000590792 ABCG2Q9UNQ0 655 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms