RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 NOP16Q9Y3C1 178 aaKnown RBP14.31□□□□□ -0.12
RETREG3-210ENST00000590541 ZNF816-ZNF321PA0A0X1KG74 233 aa14.3□□□□□ -0.12
RETREG3-210ENST00000590541 F5H5K5 113 aa14.3□□□□□ -0.12
RETREG3-210ENST00000590541 ACOT8O14734 319 aa14.3□□□□□ -0.12
RETREG3-210ENST00000590541 CST1P01037 141 aa14.3□□□□□ -0.12
RETREG3-210ENST00000590541 LIPFP07098 398 aa14.3□□□□□ -0.12
RETREG3-210ENST00000590541 FMO3P31513 532 aa14.3□□□□□ -0.12
RETREG3-210ENST00000590541 NPY4RP50391 375 aa14.3□□□□□ -0.12
RETREG3-210ENST00000590541 SLC25A1P53007 311 aa14.3□□□□□ -0.12
RETREG3-210ENST00000590541 EGR3Q06889 387 aa14.3□□□□□ -0.12
RETREG3-210ENST00000590541 DNAL1Q4LDG9 190 aa14.3□□□□□ -0.12
RETREG3-210ENST00000590541 CD276Q5ZPR3 534 aa14.3□□□□□ -0.12
RETREG3-210ENST00000590541 TRPM8Q7Z2W7 1104 aa14.3□□□□□ -0.12
RETREG3-210ENST00000590541 CYB561A3Q8NBI2 242 aa14.3□□□□□ -0.12
RETREG3-210ENST00000590541 SLC37A3Q8NCC5 494 aa14.3□□□□□ -0.12
RETREG3-210ENST00000590541 OR8D4Q8NGM9 314 aa14.3□□□□□ -0.12
RETREG3-210ENST00000590541 MRAPQ8TCY5 172 aa14.3□□□□□ -0.12
RETREG3-210ENST00000590541 LHX4Q969G2 390 aa14.3□□□□□ -0.12
RETREG3-210ENST00000590541 CCDC124Q96CT7 223 aaKnown RBP14.3□□□□□ -0.12
RETREG3-210ENST00000590541 TECTBQ96PL2 329 aa14.3□□□□□ -0.12
RETREG3-210ENST00000590541 THTPAQ9BU02 230 aa14.3□□□□□ -0.12
RETREG3-210ENST00000590541 CHID1Q9BWS9 393 aa14.3□□□□□ -0.12
RETREG3-210ENST00000590541 YY1AP1Q9H869 796 aa14.3□□□□□ -0.12
RETREG3-210ENST00000590541 PNRC2Q9NPJ4 139 aaKnown RBP14.3□□□□□ -0.12
RETREG3-210ENST00000590541 U3KQV3 271 aa14.3□□□□□ -0.12
RETREG3-210ENST00000590541 PLXNB1O43157 2135 aa14.3□□□□□ -0.12
RETREG3-210ENST00000590541 A0A1B0GWJ7 208 aa14.29□□□□□ -0.12
RETREG3-210ENST00000590541 GATA4P43694 442 aa14.29□□□□□ -0.12
RETREG3-210ENST00000590541 MAB21L1Q13394 359 aa14.29□□□□□ -0.12
RETREG3-210ENST00000590541 PCK2Q16822 640 aa14.29□□□□□ -0.12
RETREG3-210ENST00000590541 TEX30Q5JUR7 227 aa14.29□□□□□ -0.12
RETREG3-210ENST00000590541 METTL11BQ5VVY1 283 aa14.29□□□□□ -0.12
RETREG3-210ENST00000590541 PIP4P2Q8N4L2 257 aa14.29□□□□□ -0.12
RETREG3-210ENST00000590541 CELF2-AS1Q8N7Q2 184 aa14.29□□□□□ -0.12
RETREG3-210ENST00000590541 OR10G2Q8NGC3 310 aa14.29□□□□□ -0.12
RETREG3-210ENST00000590541 Q8TCH9 128 aa14.29□□□□□ -0.12
RETREG3-210ENST00000590541 GIPC3Q8TF64 312 aa14.29□□□□□ -0.12
RETREG3-210ENST00000590541 NMNAT2Q9BZQ4 307 aa14.29□□□□□ -0.12
RETREG3-210ENST00000590541 SLC22A4Q9H015 551 aa14.29□□□□□ -0.12
RETREG3-210ENST00000590541 DPAGT1Q9H3H5 408 aa14.29□□□□□ -0.12
RETREG3-210ENST00000590541 TMEM100Q9NV29 134 aa14.29□□□□□ -0.12
RETREG3-210ENST00000590541 RIIAD1A6NNX1 92 aa14.28□□□□□ -0.12
RETREG3-210ENST00000590541 M0R135 149 aa14.28□□□□□ -0.12
RETREG3-210ENST00000590541 GYG2O15488 501 aa14.28□□□□□ -0.12
RETREG3-210ENST00000590541 LCATP04180 440 aa14.28□□□□□ -0.12
RETREG3-210ENST00000590541 HLA-DPB1P04440 258 aa14.28□□□□□ -0.12
RETREG3-210ENST00000590541 ZNF3P17036 446 aa14.28□□□□□ -0.12
RETREG3-210ENST00000590541 OTX1P32242 354 aaPredicted RBP14.28□□□□□ -0.12
RETREG3-210ENST00000590541 PYCR1P32322 319 aa14.28□□□□□ -0.12
RETREG3-210ENST00000590541 ENTPD1P49961 510 aa14.28□□□□□ -0.12
RETREG3-210ENST00000590541 LOXL3P58215 753 aa14.28□□□□□ -0.12
RETREG3-210ENST00000590541 PPP1R8Q12972 351 aaKnown RBP14.28□□□□□ -0.12
RETREG3-210ENST00000590541 DHRS7BQ6IAN0 325 aaPredicted RBP14.28□□□□□ -0.12
RETREG3-210ENST00000590541 DRAM2Q6UX65 266 aa14.28□□□□□ -0.12
RETREG3-210ENST00000590541 PGAP1Q75T13 922 aa14.28□□□□□ -0.12
RETREG3-210ENST00000590541 ADGRG5Q8IZF4 528 aa14.28□□□□□ -0.12
RETREG3-210ENST00000590541 SCCPDHQ8NBX0 429 aa14.28□□□□□ -0.12
RETREG3-210ENST00000590541 BHLHE23Q8NDY6 225 aa14.28□□□□□ -0.12
RETREG3-210ENST00000590541 TEX47Q8TBZ9 253 aa14.28□□□□□ -0.12
RETREG3-210ENST00000590541 BCAS4Q8TDM0 211 aa14.28□□□□□ -0.12
RETREG3-210ENST00000590541 LRTOMTQ8WZ04 291 aa14.28□□□□□ -0.12
RETREG3-210ENST00000590541 ERGIC1Q969X5 290 aa14.28□□□□□ -0.12
RETREG3-210ENST00000590541 ZNF799Q96GE5 643 aa14.28□□□□□ -0.12
RETREG3-210ENST00000590541 MAP6Q96JE9 813 aa14.28□□□□□ -0.12
RETREG3-210ENST00000590541 SMURF1Q9HCE7 757 aa14.28□□□□□ -0.12
RETREG3-210ENST00000590541 CMC2Q9NRP2 79 aa14.28□□□□□ -0.12
RETREG3-210ENST00000590541 VNN3Q9NY84 501 aa14.28□□□□□ -0.12
RETREG3-210ENST00000590541 FAM53CQ9NYF3 392 aa14.28□□□□□ -0.12
RETREG3-210ENST00000590541 ERVK-18Q9QC07 812 aa14.28□□□□□ -0.12
RETREG3-210ENST00000590541 COMMD3-BMI1R4GMX3 469 aa14.28□□□□□ -0.12
RETREG3-210ENST00000590541 DHRS12A0PJE2 317 aa14.27□□□□□ -0.13
RETREG3-210ENST00000590541 GNGT2O14610 69 aa14.27□□□□□ -0.13
RETREG3-210ENST00000590541 FAM20BO75063 409 aa14.27□□□□□ -0.13
RETREG3-210ENST00000590541 IRF2P14316 349 aa14.27□□□□□ -0.13
RETREG3-210ENST00000590541 SPI1P17947 270 aa14.27□□□□□ -0.13
RETREG3-210ENST00000590541 GRK5P34947 590 aa14.27□□□□□ -0.13
RETREG3-210ENST00000590541 CRMP1Q14194 572 aa14.27□□□□□ -0.13
RETREG3-210ENST00000590541 GK2Q14410 553 aaPredicted RBP14.27□□□□□ -0.13
RETREG3-210ENST00000590541 PDZD9Q8IXQ8 264 aa14.27□□□□□ -0.13
RETREG3-210ENST00000590541 PNLDC1Q8NA58 520 aaKnown RBP14.27□□□□□ -0.13
RETREG3-210ENST00000590541 CLPTM1LQ96KA5 538 aa14.27□□□□□ -0.13
RETREG3-210ENST00000590541 FEVQ99581 238 aa14.27□□□□□ -0.13
RETREG3-210ENST00000590541 MMADHCQ9H3L0 296 aaPredicted RBP14.27□□□□□ -0.13
RETREG3-210ENST00000590541 OPA3Q9H6K4 179 aa14.27□□□□□ -0.13
RETREG3-210ENST00000590541 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.27□□□□□ -0.13
RETREG3-210ENST00000590541 ZNF878C9JN71 531 aa14.26□□□□□ -0.13
RETREG3-210ENST00000590541 GPR37O15354 613 aa14.26□□□□□ -0.13
RETREG3-210ENST00000590541 FCN3O75636 299 aa14.26□□□□□ -0.13
RETREG3-210ENST00000590541 SOX14O95416 240 aa14.26□□□□□ -0.13
RETREG3-210ENST00000590541 PAICSP22234 425 aaKnown RBP14.26□□□□□ -0.13
RETREG3-210ENST00000590541 SLC15A1P46059 708 aa14.26□□□□□ -0.13
RETREG3-210ENST00000590541 RAD23AP54725 363 aa14.26□□□□□ -0.13
RETREG3-210ENST00000590541 ARF6P62330 175 aa14.26□□□□□ -0.13
RETREG3-210ENST00000590541 HERPUD1Q15011 391 aa14.26□□□□□ -0.13
RETREG3-210ENST00000590541 PRAMEF6Q5VXH4 476 aa14.26□□□□□ -0.13
RETREG3-210ENST00000590541 MRPL21Q7Z2W9 205 aaKnown RBP14.26□□□□□ -0.13
RETREG3-210ENST00000590541 DCXRQ7Z4W1 244 aa14.26□□□□□ -0.13
RETREG3-210ENST00000590541 OR9Q1Q8NGQ5 310 aa14.26□□□□□ -0.13
RETREG3-210ENST00000590541 OR4Q3Q8NH05 313 aa14.26□□□□□ -0.13
RETREG3-210ENST00000590541 CANT1Q8WVQ1 401 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms