RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 KCNJ15Q99712 375 aa11.34□□□□□ -0.59
HDAC5-208ENST00000588419 SIRPDQ9H106 197 aa11.34□□□□□ -0.59
HDAC5-208ENST00000588419 MYLK2Q9H1R3 596 aa11.34□□□□□ -0.59
HDAC5-208ENST00000588419 SEMA6AQ9H2E6 1030 aa11.34□□□□□ -0.59
HDAC5-208ENST00000588419 DNAJC27Q9NZQ0 273 aa11.34□□□□□ -0.59
HDAC5-208ENST00000588419 DUX4Q9UBX2 424 aa11.34□□□□□ -0.59
HDAC5-208ENST00000588419 RNF114Q9Y508 228 aa11.34□□□□□ -0.59
HDAC5-208ENST00000588419 ZNF878C9JN71 531 aa11.33□□□□□ -0.6
HDAC5-208ENST00000588419 TNFRSF11BO00300 401 aa11.33□□□□□ -0.6
HDAC5-208ENST00000588419 XRCC2O43543 280 aa11.33□□□□□ -0.6
HDAC5-208ENST00000588419 NDUFA7O95182 113 aa11.33□□□□□ -0.6
HDAC5-208ENST00000588419 SOX14O95416 240 aa11.33□□□□□ -0.6
HDAC5-208ENST00000588419 CLUP10909 449 aa11.33□□□□□ -0.6
HDAC5-208ENST00000588419 FMO3P31513 532 aa11.33□□□□□ -0.6
HDAC5-208ENST00000588419 CSNK2BP67870 215 aa11.33□□□□□ -0.6
HDAC5-208ENST00000588419 PPP1R8Q12972 351 aaKnown RBP11.33□□□□□ -0.6
HDAC5-208ENST00000588419 IKZF1Q13422 519 aa11.33□□□□□ -0.6
HDAC5-208ENST00000588419 CRMP1Q14194 572 aa11.33□□□□□ -0.6
HDAC5-208ENST00000588419 EIF2B1Q14232 305 aaKnown RBP11.33□□□□□ -0.6
HDAC5-208ENST00000588419 PCK2Q16822 640 aa11.33□□□□□ -0.6
HDAC5-208ENST00000588419 RPL13AP3Q6NVV1 102 aa11.33□□□□□ -0.6
HDAC5-208ENST00000588419 CYP2R1Q6VVX0 501 aa11.33□□□□□ -0.6
HDAC5-208ENST00000588419 DPY19L4Q7Z388 723 aa11.33□□□□□ -0.6
HDAC5-208ENST00000588419 TMEM86BQ8N661 226 aa11.33□□□□□ -0.6
HDAC5-208ENST00000588419 FAM216BQ8N7L0 139 aa11.33□□□□□ -0.6
HDAC5-208ENST00000588419 SPERTQ8NA61 448 aa11.33□□□□□ -0.6
HDAC5-208ENST00000588419 OR8D4Q8NGM9 314 aa11.33□□□□□ -0.6
HDAC5-208ENST00000588419 OTULINQ96BN8 352 aa11.33□□□□□ -0.6
HDAC5-208ENST00000588419 CCL13Q99616 98 aa11.33□□□□□ -0.6
HDAC5-208ENST00000588419 BTBD10Q9BSF8 475 aa11.33□□□□□ -0.6
HDAC5-208ENST00000588419 PRDM13Q9H4Q3 707 aa11.33□□□□□ -0.6
HDAC5-208ENST00000588419 BRD7Q9NPI1 651 aa11.33□□□□□ -0.6
HDAC5-208ENST00000588419 SIRT7Q9NRC8 400 aa11.33□□□□□ -0.6
HDAC5-208ENST00000588419 ARMC1Q9NVT9 282 aa11.33□□□□□ -0.6
HDAC5-208ENST00000588419 POMT1Q9Y6A1 747 aa11.33□□□□□ -0.6
HDAC5-208ENST00000588419 WNK1Q9H4A3 2382 aa11.32□□□□□ -0.6
HDAC5-208ENST00000588419 ZNF593O00488 134 aaPredicted RBP11.32□□□□□ -0.6
HDAC5-208ENST00000588419 TIMM23O14925 209 aa11.32□□□□□ -0.6
HDAC5-208ENST00000588419 NDUFA2O43678 99 aa11.32□□□□□ -0.6
HDAC5-208ENST00000588419 FCN3O75636 299 aa11.32□□□□□ -0.6
HDAC5-208ENST00000588419 CCNB2O95067 398 aa11.32□□□□□ -0.6
HDAC5-208ENST00000588419 GRK5P34947 590 aa11.32□□□□□ -0.6
HDAC5-208ENST00000588419 DLX1P56177 255 aa11.32□□□□□ -0.6
HDAC5-208ENST00000588419 KRTAP10-3P60369 221 aa11.32□□□□□ -0.6
HDAC5-208ENST00000588419 WDR38Q5JTN6 314 aa11.32□□□□□ -0.6
HDAC5-208ENST00000588419 SAMD4BQ5PRF9 694 aaKnown RBP11.32□□□□□ -0.6
HDAC5-208ENST00000588419 FAM57BQ71RH2 274 aa11.32□□□□□ -0.6
HDAC5-208ENST00000588419 PGAM4Q8N0Y7 254 aa11.32□□□□□ -0.6
HDAC5-208ENST00000588419 PLPP7Q8NBV4 271 aa11.32□□□□□ -0.6
HDAC5-208ENST00000588419 OR6N2Q8NGY6 317 aa11.32□□□□□ -0.6
HDAC5-208ENST00000588419 H1FXQ92522 213 aaKnown RBP11.32□□□□□ -0.6
HDAC5-208ENST00000588419 DYRK2Q92630 601 aa11.32□□□□□ -0.6
HDAC5-208ENST00000588419 SEH1LQ96EE3 360 aa11.32□□□□□ -0.6
HDAC5-208ENST00000588419 REEP6Q96HR9 211 aa11.32□□□□□ -0.6
HDAC5-208ENST00000588419 CDRT15Q96T59 188 aa11.32□□□□□ -0.6
HDAC5-208ENST00000588419 CITED1Q99966 193 aa11.32□□□□□ -0.6
HDAC5-208ENST00000588419 PAPOLGQ9BWT3 736 aaKnown RBP11.32□□□□□ -0.6
HDAC5-208ENST00000588419 TSSK6Q9BXA6 273 aa11.32□□□□□ -0.6
HDAC5-208ENST00000588419 OPA3Q9H6K4 179 aa11.32□□□□□ -0.6
HDAC5-208ENST00000588419 FAM96BQ9Y3D0 163 aa11.32□□□□□ -0.6
HDAC5-208ENST00000588419 LYVE1Q9Y5Y7 322 aa11.32□□□□□ -0.6
HDAC5-208ENST00000588419 BTBD17A6NE02 478 aa11.31□□□□□ -0.6
HDAC5-208ENST00000588419 PTBP3O95758 552 aaKnown RBP11.31□□□□□ -0.6
HDAC5-208ENST00000588419 HSD17B1P14061 328 aa11.31□□□□□ -0.6
HDAC5-208ENST00000588419 SPI1P17947 270 aa11.31□□□□□ -0.6
HDAC5-208ENST00000588419 OTX1P32242 354 aaPredicted RBP11.31□□□□□ -0.6
HDAC5-208ENST00000588419 GNALP38405 381 aa11.31□□□□□ -0.6
HDAC5-208ENST00000588419 GRB2P62993 217 aaKnown RBP11.31□□□□□ -0.6
HDAC5-208ENST00000588419 KLRD1Q13241 179 aa11.31□□□□□ -0.6
HDAC5-208ENST00000588419 MICBQ29980 383 aa11.31□□□□□ -0.6
HDAC5-208ENST00000588419 DHRS7BQ6IAN0 325 aaPredicted RBP11.31□□□□□ -0.6
HDAC5-208ENST00000588419 SLC16A9Q7RTY1 509 aa11.31□□□□□ -0.6
HDAC5-208ENST00000588419 WDR86Q86TI4 376 aa11.31□□□□□ -0.6
HDAC5-208ENST00000588419 ERI1Q8IV48 349 aaKnown RBP11.31□□□□□ -0.6
HDAC5-208ENST00000588419 AQP11Q8NBQ7 271 aa11.31□□□□□ -0.6
HDAC5-208ENST00000588419 OR4Q3Q8NH05 313 aa11.31□□□□□ -0.6
HDAC5-208ENST00000588419 MMP27Q9H306 513 aa11.31□□□□□ -0.6
HDAC5-208ENST00000588419 PPP1R3EQ9H7J1 279 aa11.31□□□□□ -0.6
HDAC5-208ENST00000588419 CNTD2Q9H8S5 307 aa11.31□□□□□ -0.6
HDAC5-208ENST00000588419 TCF7L1Q9HCS4 588 aa11.31□□□□□ -0.6
HDAC5-208ENST00000588419 IL1RAPQ9NPH3 570 aa11.31□□□□□ -0.6
HDAC5-208ENST00000588419 SNTG1Q9NSN8 517 aa11.31□□□□□ -0.6
HDAC5-208ENST00000588419 RPUSD1Q9UJJ7 312 aaKnown RBP11.31□□□□□ -0.6
HDAC5-208ENST00000588419 A0A1B0GVI7 797 aa11.3□□□□□ -0.6
HDAC5-208ENST00000588419 DHRS12A0PJE2 317 aa11.3□□□□□ -0.6
HDAC5-208ENST00000588419 ACOT8O14734 319 aa11.3□□□□□ -0.6
HDAC5-208ENST00000588419 NDUFB3O43676 98 aa11.3□□□□□ -0.6
HDAC5-208ENST00000588419 ECDO95905 644 aaPredicted RBP11.3□□□□□ -0.6
HDAC5-208ENST00000588419 GASTP01350 101 aa11.3□□□□□ -0.6
HDAC5-208ENST00000588419 SELLP14151 372 aa11.3□□□□□ -0.6
HDAC5-208ENST00000588419 IER3P46695 156 aa11.3□□□□□ -0.6
HDAC5-208ENST00000588419 CDONQ4KMG0 1287 aa11.3□□□□□ -0.6
HDAC5-208ENST00000588419 TEX36Q5VZQ5 186 aa11.3□□□□□ -0.6
HDAC5-208ENST00000588419 RASSF6Q6ZTQ3 369 aa11.3□□□□□ -0.6
HDAC5-208ENST00000588419 KCTD8Q6ZWB6 473 aa11.3□□□□□ -0.6
HDAC5-208ENST00000588419 SLC36A1Q7Z2H8 476 aa11.3□□□□□ -0.6
HDAC5-208ENST00000588419 C1QL4Q86Z23 238 aa11.3□□□□□ -0.6
HDAC5-208ENST00000588419 DEFB107AQ8IZN7 70 aa11.3□□□□□ -0.6
HDAC5-208ENST00000588419 OR1M1Q8NGA1 313 aa11.3□□□□□ -0.6
HDAC5-208ENST00000588419 OR5T2Q8NGG2 359 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms