RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 SSBP1Q04837 148 aaKnown RBP5.41□□□□□ -1.54
SMAD4-203ENST00000585448 RAB31Q13636 194 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 TAF13Q15543 124 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 TGIF1Q15583 401 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 ADIPOQQ15848 244 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 PRSS8Q16651 343 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 CT45A2Q5DJT8 189 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 RPL22L1Q6P5R6 122 aaKnown RBP5.41□□□□□ -1.54
SMAD4-203ENST00000585448 ANKRD16Q6P6B7 361 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 DOK6Q6PKX4 331 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 CLEC18BQ6UXF7 455 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 CHST9Q7L1S5 443 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 TMEM144Q7Z5S9 345 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 ZNF567Q8N184 647 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 MUC20Q8N307 709 aaPredicted RBP5.41□□□□□ -1.54
SMAD4-203ENST00000585448 GALNT16Q8N428 558 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 LINC00471Q8N535 108 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 FAM71E2Q8N5Q1 922 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 ACOT4Q8N9L9 421 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 CCDC71LQ8N9Z2 235 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 ZNF485Q8NCK3 441 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 NOXO1Q8NFA2 376 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 STEAP2Q8NFT2 490 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 STAG3L4Q8TBR4 150 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 GPR148Q8TDV2 347 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 ABHD5Q8WTS1 349 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 SECTM1Q8WVN6 248 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 FRZBQ92765 325 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 TMEM186Q96B77 213 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 PINX1Q96BK5 328 aaKnown RBP5.41□□□□□ -1.54
SMAD4-203ENST00000585448 PPCDCQ96CD2 204 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 MS4A6EQ96DS6 147 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 C4orf36Q96KX1 117 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 IMMP2LQ96T52 175 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 TIMP4Q99727 224 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 FAM110AQ9BQ89 295 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 SLC25A21Q9BQT8 299 aaPredicted RBP5.41□□□□□ -1.54
SMAD4-203ENST00000585448 SNRNP25Q9BV90 132 aaKnown RBP5.41□□□□□ -1.54
SMAD4-203ENST00000585448 TPSD1Q9BZJ3 242 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 PORCNQ9H237 461 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 IKZF5Q9H5V7 419 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 RERGLQ9H628 205 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 ALG9Q9H6U8 611 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 TBC1D17Q9HA65 648 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 APMAPQ9HDC9 416 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 BET1LQ9NYM9 111 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 DNAJC27Q9NZQ0 273 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 TBC1D29Q9UFV1 150 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 RNF150Q9ULK6 438 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 YARS2Q9Y2Z4 477 aaKnown RBP5.41□□□□□ -1.54
SMAD4-203ENST00000585448 TBL2Q9Y4P3 447 aaKnown RBP5.41□□□□□ -1.54
SMAD4-203ENST00000585448 RAI2Q9Y5P3 530 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 SNX10Q9Y5X0 201 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 PTGDR2Q9Y5Y4 395 aa5.41□□□□□ -1.54
SMAD4-203ENST00000585448 CITO14578 2027 aa5.4□□□□□ -1.54
SMAD4-203ENST00000585448 TRBV24-1A0A075B6N3 115 aa5.4□□□□□ -1.54
SMAD4-203ENST00000585448 VWC2LB2RUY7 222 aa5.4□□□□□ -1.54
SMAD4-203ENST00000585448 ADM5C9JUS6 153 aa5.4□□□□□ -1.54
SMAD4-203ENST00000585448 ZNF208O43345 1280 aa5.4□□□□□ -1.54
SMAD4-203ENST00000585448 ERAL1O75616 437 aaKnown RBP5.4□□□□□ -1.54
SMAD4-203ENST00000585448 NXPH3O95157 252 aa5.4□□□□□ -1.54
SMAD4-203ENST00000585448 NDUFB8O95169 186 aa5.4□□□□□ -1.54
SMAD4-203ENST00000585448 RAB40ALP0C0E4 278 aa5.4□□□□□ -1.54
SMAD4-203ENST00000585448 PGAM2P15259 253 aa5.4□□□□□ -1.54
SMAD4-203ENST00000585448 CD1DP15813 335 aa5.4□□□□□ -1.54
SMAD4-203ENST00000585448 HOXB9P17482 250 aaPredicted RBP5.4□□□□□ -1.54
SMAD4-203ENST00000585448 IL11P20809 199 aa5.4□□□□□ -1.54
SMAD4-203ENST00000585448 MMP11P24347 488 aa5.4□□□□□ -1.54
SMAD4-203ENST00000585448 CXCR1P25024 350 aa5.4□□□□□ -1.54
SMAD4-203ENST00000585448 IMPA1P29218 277 aa5.4□□□□□ -1.54
SMAD4-203ENST00000585448 CORO1AP31146 461 aaKnown RBP5.4□□□□□ -1.54
SMAD4-203ENST00000585448 GLIPR1P48060 266 aa5.4□□□□□ -1.54
SMAD4-203ENST00000585448 AGTR2P50052 363 aa5.4□□□□□ -1.54
SMAD4-203ENST00000585448 SMIM11AP58511 58 aa5.4□□□□□ -1.54
SMAD4-203ENST00000585448 TAS2R43P59537 309 aa5.4□□□□□ -1.54
SMAD4-203ENST00000585448 ERVPABLB-1P60509 514 aa5.4□□□□□ -1.54
SMAD4-203ENST00000585448 SELENOWP63302 87 aa5.4□□□□□ -1.54
SMAD4-203ENST00000585448 PAFAH1B3Q15102 231 aaKnown RBP5.4□□□□□ -1.54
SMAD4-203ENST00000585448 RBBP7Q16576 425 aa5.4□□□□□ -1.54
SMAD4-203ENST00000585448 HYAL4Q2M3T9 481 aa5.4□□□□□ -1.54
SMAD4-203ENST00000585448 C2orf68Q2NKX9 166 aa5.4□□□□□ -1.54
SMAD4-203ENST00000585448 QRICH1Q2TAL8 776 aa5.4□□□□□ -1.54
SMAD4-203ENST00000585448 SNAI3Q3KNW1 292 aa5.4□□□□□ -1.54
SMAD4-203ENST00000585448 FAM174BQ3ZCQ3 159 aa5.4□□□□□ -1.54
SMAD4-203ENST00000585448 LDLRAD2Q5SZI1 272 aa5.4□□□□□ -1.54
SMAD4-203ENST00000585448 C1orf189Q5VU69 101 aa5.4□□□□□ -1.54
SMAD4-203ENST00000585448 SYPL2Q5VXT5 272 aa5.4□□□□□ -1.54
SMAD4-203ENST00000585448 NCBP2-AS2Q69YL0 99 aa5.4□□□□□ -1.54
SMAD4-203ENST00000585448 PODNL1Q6PEZ8 512 aa5.4□□□□□ -1.54
SMAD4-203ENST00000585448 PAQR6Q6TCH4 344 aa5.4□□□□□ -1.54
SMAD4-203ENST00000585448 Q6ZSR9 355 aa5.4□□□□□ -1.54
SMAD4-203ENST00000585448 RPS27LQ71UM5 84 aaKnown RBP5.4□□□□□ -1.54
SMAD4-203ENST00000585448 VTCN1Q7Z7D3 282 aa5.4□□□□□ -1.54
SMAD4-203ENST00000585448 VASH2Q86V25 355 aa5.4□□□□□ -1.54
SMAD4-203ENST00000585448 IZUMO1Q8IYV9 350 aa5.4□□□□□ -1.54
SMAD4-203ENST00000585448 TMEM156Q8N614 296 aa5.4□□□□□ -1.54
SMAD4-203ENST00000585448 COX18Q8N8Q8 333 aa5.4□□□□□ -1.54
SMAD4-203ENST00000585448 SLC26A10Q8NG04 563 aa5.4□□□□□ -1.54
SMAD4-203ENST00000585448 OR4K17Q8NGC6 315 aa5.4□□□□□ -1.54
SMAD4-203ENST00000585448 OR1K1Q8NGR3 316 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms