RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 DHRS2Q13268 280 aa16.28■□□□□ 0.2
PRPF40B-208ENST00000548436 RSPO4Q2I0M5 234 aaPredicted RBP16.28■□□□□ 0.2
PRPF40B-208ENST00000548436 PLAC9Q5JTB6 97 aa16.28■□□□□ 0.2
PRPF40B-208ENST00000548436 LY6G6FQ5SQ64 297 aa16.28■□□□□ 0.2
PRPF40B-208ENST00000548436 CRIP3Q6Q6R5 217 aa16.28■□□□□ 0.2
PRPF40B-208ENST00000548436 C20orf196Q8IYI0 205 aa16.28■□□□□ 0.2
PRPF40B-208ENST00000548436 NECAB3Q96P71 396 aaPredicted RBP16.28■□□□□ 0.2
PRPF40B-208ENST00000548436 PRRT1Q99946 306 aa16.28■□□□□ 0.2
PRPF40B-208ENST00000548436 ULBP2Q9BZM5 246 aa16.28■□□□□ 0.2
PRPF40B-208ENST00000548436 LOC100509620A0A075B734 347 aa16.28■□□□□ 0.2
PRPF40B-208ENST00000548436 DBHP09172 617 aa16.28■□□□□ 0.2
PRPF40B-208ENST00000548436 LIPCP11150 499 aa16.28■□□□□ 0.2
PRPF40B-208ENST00000548436 NTF4P34130 210 aa16.28■□□□□ 0.2
PRPF40B-208ENST00000548436 CD96P40200 585 aa16.28■□□□□ 0.2
PRPF40B-208ENST00000548436 RAC3P60763 192 aa16.28■□□□□ 0.2
PRPF40B-208ENST00000548436 CCDC157Q569K6 752 aa16.28■□□□□ 0.2
PRPF40B-208ENST00000548436 CLLU1Q5K131 121 aa16.28■□□□□ 0.2
PRPF40B-208ENST00000548436 C6orf15Q6UXA7 325 aaPredicted RBP16.28■□□□□ 0.2
PRPF40B-208ENST00000548436 DBX2Q6ZNG2 339 aa16.28■□□□□ 0.2
PRPF40B-208ENST00000548436 TMEM105Q8N8V8 129 aa16.28■□□□□ 0.2
PRPF40B-208ENST00000548436 DTWD2Q8NBA8 298 aa16.28■□□□□ 0.2
PRPF40B-208ENST00000548436 KCNG3Q8TAE7 436 aa16.28■□□□□ 0.2
PRPF40B-208ENST00000548436 FBXO17Q96EF6 278 aa16.28■□□□□ 0.2
PRPF40B-208ENST00000548436 GPER1Q99527 375 aa16.28■□□□□ 0.2
PRPF40B-208ENST00000548436 IFT46Q9NQC8 304 aa16.28■□□□□ 0.2
PRPF40B-208ENST00000548436 MAB21L2Q9Y586 359 aa16.28■□□□□ 0.2
PRPF40B-208ENST00000548436 OR6C65A6NJZ3 312 aa16.27■□□□□ 0.2
PRPF40B-208ENST00000548436 GJE1A6NN92 205 aa16.27■□□□□ 0.2
PRPF40B-208ENST00000548436 CHRM2P08172 466 aa16.27■□□□□ 0.2
PRPF40B-208ENST00000548436 ICAM2P13598 275 aa16.27■□□□□ 0.2
PRPF40B-208ENST00000548436 MPZP25189 248 aa16.27■□□□□ 0.2
PRPF40B-208ENST00000548436 OTX1P32242 354 aaPredicted RBP16.27■□□□□ 0.2
PRPF40B-208ENST00000548436 TMEM50BP56557 158 aa16.27■□□□□ 0.2
PRPF40B-208ENST00000548436 GGNQ86UU5 652 aa16.27■□□□□ 0.2
PRPF40B-208ENST00000548436 OR14L1PQ8NHC6 308 aa16.27■□□□□ 0.2
PRPF40B-208ENST00000548436 SLX1AQ9BQ83 275 aa16.27■□□□□ 0.2
PRPF40B-208ENST00000548436 FXYD6-FXYD2A0A087WZ82 144 aa16.26■□□□□ 0.19
PRPF40B-208ENST00000548436 A0A0U1RQV5 110 aa16.26■□□□□ 0.19
PRPF40B-208ENST00000548436 LRRC3CA6NJW4 275 aa16.26■□□□□ 0.19
PRPF40B-208ENST00000548436 ZNF24P17028 368 aa16.26■□□□□ 0.19
PRPF40B-208ENST00000548436 C4BPBP20851 252 aa16.26■□□□□ 0.19
PRPF40B-208ENST00000548436 P2RX3P56373 397 aa16.26■□□□□ 0.19
PRPF40B-208ENST00000548436 SFRP5Q5T4F7 317 aa16.26■□□□□ 0.19
PRPF40B-208ENST00000548436 H3F3CQ6NXT2 135 aa16.26■□□□□ 0.19
PRPF40B-208ENST00000548436 ESX1Q8N693 406 aa16.26■□□□□ 0.19
PRPF40B-208ENST00000548436 INTS12Q96CB8 462 aaKnown RBP16.26■□□□□ 0.19
PRPF40B-208ENST00000548436 TMEM59Q9BXS4 323 aa16.26■□□□□ 0.19
PRPF40B-208ENST00000548436 FXYD6Q9H0Q3 95 aa16.26■□□□□ 0.19
PRPF40B-208ENST00000548436 V9GYS6 101 aa16.26■□□□□ 0.19
PRPF40B-208ENST00000548436 NCOR1O75376 2440 aa16.26■□□□□ 0.19
PRPF40B-208ENST00000548436 HPP00738 406 aa16.26■□□□□ 0.19
PRPF40B-208ENST00000548436 ECH1Q13011 328 aa16.26■□□□□ 0.19
PRPF40B-208ENST00000548436 SSPNQ14714 243 aa16.26■□□□□ 0.19
PRPF40B-208ENST00000548436 HLXQ14774 488 aaPredicted RBP16.26■□□□□ 0.19
PRPF40B-208ENST00000548436 ACER2Q5QJU3 275 aa16.26■□□□□ 0.19
PRPF40B-208ENST00000548436 C3P1Q6ZMU1 363 aa16.26■□□□□ 0.19
PRPF40B-208ENST00000548436 C1QL2Q7Z5L3 287 aa16.26■□□□□ 0.19
PRPF40B-208ENST00000548436 STEAP2Q8NFT2 490 aa16.26■□□□□ 0.19
PRPF40B-208ENST00000548436 NPRL2Q8WTW4 380 aa16.26■□□□□ 0.19
PRPF40B-208ENST00000548436 RAB3CQ96E17 227 aa16.26■□□□□ 0.19
PRPF40B-208ENST00000548436 SF3B5Q9BWJ5 86 aaKnown RBP16.26■□□□□ 0.19
PRPF40B-208ENST00000548436 ARRDC1-AS1Q9H2J1 176 aa16.26■□□□□ 0.19
PRPF40B-208ENST00000548436 DEPPQ9NTK1 212 aa16.26■□□□□ 0.19
PRPF40B-208ENST00000548436 PLEK2Q9NYT0 353 aa16.26■□□□□ 0.19
PRPF40B-208ENST00000548436 ZNF230Q9UIE0 474 aaPredicted RBP16.26■□□□□ 0.19
PRPF40B-208ENST00000548436 OR2AT4A6NND4 320 aa16.25■□□□□ 0.19
PRPF40B-208ENST00000548436 CRTAPO75718 401 aaPredicted RBP16.25■□□□□ 0.19
PRPF40B-208ENST00000548436 DHRS3O75911 302 aa16.25■□□□□ 0.19
PRPF40B-208ENST00000548436 SNAPC5O75971 98 aa16.25■□□□□ 0.19
PRPF40B-208ENST00000548436 PRF1P14222 555 aa16.25■□□□□ 0.19
PRPF40B-208ENST00000548436 HIST1H1DP16402 221 aaKnown RBP16.25■□□□□ 0.19
PRPF40B-208ENST00000548436 FAHP16930 419 aa16.25■□□□□ 0.19
PRPF40B-208ENST00000548436 S100A11P31949 105 aa16.25■□□□□ 0.19
PRPF40B-208ENST00000548436 ZNF84P51523 738 aa16.25■□□□□ 0.19
PRPF40B-208ENST00000548436 SORDQ00796 357 aa16.25■□□□□ 0.19
PRPF40B-208ENST00000548436 KISS1Q15726 138 aa16.25■□□□□ 0.19
PRPF40B-208ENST00000548436 UBE2V2Q15819 145 aa16.25■□□□□ 0.19
PRPF40B-208ENST00000548436 FAM27BQ5VT28 67 aa16.25■□□□□ 0.19
PRPF40B-208ENST00000548436 TMUB2Q71RG4 321 aa16.25■□□□□ 0.19
PRPF40B-208ENST00000548436 SLC25A42Q86VD7 318 aa16.25■□□□□ 0.19
PRPF40B-208ENST00000548436 OR5D18Q8NGL1 313 aa16.25■□□□□ 0.19
PRPF40B-208ENST00000548436 ZNF224Q9NZL3 707 aa16.25■□□□□ 0.19
PRPF40B-208ENST00000548436 PLEKHA6Q9Y2H5 1048 aa16.25■□□□□ 0.19
PRPF40B-208ENST00000548436 FLVCR1Q9Y5Y0 555 aa16.25■□□□□ 0.19
PRPF40B-208ENST00000548436 M0R135 149 aa16.25■□□□□ 0.19
PRPF40B-208ENST00000548436 DNPH1O43598 174 aa16.25■□□□□ 0.19
PRPF40B-208ENST00000548436 RAD51DO75771 328 aa16.25■□□□□ 0.19
PRPF40B-208ENST00000548436 HLA-AP01891 365 aaKnown RBP16.25■□□□□ 0.19
PRPF40B-208ENST00000548436 PMP2P02689 132 aa16.25■□□□□ 0.19
PRPF40B-208ENST00000548436 GSTP1P09211 210 aaKnown RBP16.25■□□□□ 0.19
PRPF40B-208ENST00000548436 PPP3CBP16298 524 aa16.25■□□□□ 0.19
PRPF40B-208ENST00000548436 ZBTB25P24278 435 aa16.25■□□□□ 0.19
PRPF40B-208ENST00000548436 MPLP40238 635 aa16.25■□□□□ 0.19
PRPF40B-208ENST00000548436 STARP49675 285 aa16.25■□□□□ 0.19
PRPF40B-208ENST00000548436 CARD18P57730 90 aa16.25■□□□□ 0.19
PRPF40B-208ENST00000548436 MRPS34P82930 218 aaKnown RBP16.25■□□□□ 0.19
PRPF40B-208ENST00000548436 RAB11FIP2Q7L804 512 aa16.25■□□□□ 0.19
PRPF40B-208ENST00000548436 KCNE4Q8WWG9 221 aa16.25■□□□□ 0.19
PRPF40B-208ENST00000548436 ROBO4Q8WZ75 1007 aa16.25■□□□□ 0.19
PRPF40B-208ENST00000548436 ZNF799Q96GE5 643 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms