RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 SNRNP35Q16560 246 aaKnown RBP4.59□□□□□ -1.67
UBE4A-203ENST00000545354 ACKR1Q16570 336 aa4.59□□□□□ -1.67
UBE4A-203ENST00000545354 LRRC10Q5BKY1 277 aa4.59□□□□□ -1.67
UBE4A-203ENST00000545354 C6orf226Q5I0X4 101 aa4.59□□□□□ -1.67
UBE4A-203ENST00000545354 TMEM201Q5SNT2 666 aa4.59□□□□□ -1.67
UBE4A-203ENST00000545354 PODNL1Q6PEZ8 512 aa4.59□□□□□ -1.67
UBE4A-203ENST00000545354 TRMT10BQ6PF06 316 aaKnown RBP4.59□□□□□ -1.67
UBE4A-203ENST00000545354 KCNIP4Q6PIL6 250 aa4.59□□□□□ -1.67
UBE4A-203ENST00000545354 PRICKLE2Q7Z3G6 844 aa4.59□□□□□ -1.67
UBE4A-203ENST00000545354 ERASQ7Z444 233 aa4.59□□□□□ -1.67
UBE4A-203ENST00000545354 YAF2Q8IY57 180 aa4.59□□□□□ -1.67
UBE4A-203ENST00000545354 CMTM1Q8IZ96 169 aa4.59□□□□□ -1.67
UBE4A-203ENST00000545354 PELI3Q8N2H9 469 aa4.59□□□□□ -1.67
UBE4A-203ENST00000545354 FAM24BQ8N5W8 94 aa4.59□□□□□ -1.67
UBE4A-203ENST00000545354 FER1L6-AS1Q8NA97 138 aa4.59□□□□□ -1.67
UBE4A-203ENST00000545354 OR5D16Q8NGK9 328 aa4.59□□□□□ -1.67
UBE4A-203ENST00000545354 OR10G4Q8NGN3 311 aa4.59□□□□□ -1.67
UBE4A-203ENST00000545354 DOK4Q8TEW6 326 aa4.59□□□□□ -1.67
UBE4A-203ENST00000545354 LHX4Q969G2 390 aa4.59□□□□□ -1.67
UBE4A-203ENST00000545354 ZNF582Q96NG8 517 aaPredicted RBP4.59□□□□□ -1.67
UBE4A-203ENST00000545354 DDOQ99489 341 aa4.59□□□□□ -1.67
UBE4A-203ENST00000545354 TAPBPLQ9BX59 468 aa4.59□□□□□ -1.67
UBE4A-203ENST00000545354 OR11A1Q9GZK7 315 aa4.59□□□□□ -1.67
UBE4A-203ENST00000545354 IL25Q9H293 177 aa4.59□□□□□ -1.67
UBE4A-203ENST00000545354 OR51I1Q9H343 314 aa4.59□□□□□ -1.67
UBE4A-203ENST00000545354 GCM1Q9NP62 436 aa4.59□□□□□ -1.67
UBE4A-203ENST00000545354 EXOSC3Q9NQT5 275 aaKnown RBP4.59□□□□□ -1.67
UBE4A-203ENST00000545354 GPR27Q9NS67 375 aa4.59□□□□□ -1.67
UBE4A-203ENST00000545354 KLRF1Q9NZS2 232 aa4.59□□□□□ -1.67
UBE4A-203ENST00000545354 MARCH2Q9P0N8 246 aa4.59□□□□□ -1.67
UBE4A-203ENST00000545354 MARCOQ9UEW3 520 aaPredicted RBP4.59□□□□□ -1.67
UBE4A-203ENST00000545354 WDR45Q9Y484 360 aa4.59□□□□□ -1.67
UBE4A-203ENST00000545354 SBF2Q86WG5 1849 aa4.59□□□□□ -1.68
UBE4A-203ENST00000545354 PHIPQ8WWQ0 1821 aa4.59□□□□□ -1.68
UBE4A-203ENST00000545354 PRR36Q9H6K5 1346 aa4.58□□□□□ -1.68
UBE4A-203ENST00000545354 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.58□□□□□ -1.68
UBE4A-203ENST00000545354 IGHV1-69-2A0A0G2JMI3 117 aa4.58□□□□□ -1.68
UBE4A-203ENST00000545354 KIR2DS1A0A191URI9 304 aa4.58□□□□□ -1.68
UBE4A-203ENST00000545354 B4DEV8 164 aa4.58□□□□□ -1.68
UBE4A-203ENST00000545354 FTCDNL1E5RQL4 147 aa4.58□□□□□ -1.68
UBE4A-203ENST00000545354 K7EPK0 472 aa4.58□□□□□ -1.68
UBE4A-203ENST00000545354 SULT2B1O00204 365 aa4.58□□□□□ -1.68
UBE4A-203ENST00000545354 BCL2L11O43521 198 aa4.58□□□□□ -1.68
UBE4A-203ENST00000545354 VENTXO95231 258 aa4.58□□□□□ -1.68
UBE4A-203ENST00000545354 CST1P01037 141 aa4.58□□□□□ -1.68
UBE4A-203ENST00000545354 NRASP01111 189 aa4.58□□□□□ -1.68
UBE4A-203ENST00000545354 MBPP02686 304 aaPredicted RBP4.58□□□□□ -1.68
UBE4A-203ENST00000545354 MMP7P09237 267 aaPredicted RBP4.58□□□□□ -1.68
UBE4A-203ENST00000545354 RAB40ALP0C0E4 278 aa4.58□□□□□ -1.68
UBE4A-203ENST00000545354 SLC35G6P0C7Q6 338 aa4.58□□□□□ -1.68
UBE4A-203ENST00000545354 LIPCP11150 499 aa4.58□□□□□ -1.68
UBE4A-203ENST00000545354 ERGP11308 486 aa4.58□□□□□ -1.68
UBE4A-203ENST00000545354 HOXB9P17482 250 aaPredicted RBP4.58□□□□□ -1.68
UBE4A-203ENST00000545354 CXCL3P19876 107 aa4.58□□□□□ -1.68
UBE4A-203ENST00000545354 ALOX5APP20292 161 aa4.58□□□□□ -1.68
UBE4A-203ENST00000545354 ARL4DP49703 201 aa4.58□□□□□ -1.68
UBE4A-203ENST00000545354 SULT1A1P50225 295 aa4.58□□□□□ -1.68
UBE4A-203ENST00000545354 SULT1A2P50226 295 aa4.58□□□□□ -1.68
UBE4A-203ENST00000545354 HMGCS2P54868 508 aa4.58□□□□□ -1.68
UBE4A-203ENST00000545354 ZP4Q12836 540 aa4.58□□□□□ -1.68
UBE4A-203ENST00000545354 EDDM3AQ14507 147 aa4.58□□□□□ -1.68
UBE4A-203ENST00000545354 KIR2DS1Q14954 304 aa4.58□□□□□ -1.68
UBE4A-203ENST00000545354 PMVKQ15126 192 aa4.58□□□□□ -1.68
UBE4A-203ENST00000545354 BATFQ16520 125 aa4.58□□□□□ -1.68
UBE4A-203ENST00000545354 TIMM23BQ5SRD1 257 aa4.58□□□□□ -1.68
UBE4A-203ENST00000545354 UTF1Q5T230 341 aa4.58□□□□□ -1.68
UBE4A-203ENST00000545354 RNF44Q7L0R7 432 aa4.58□□□□□ -1.68
UBE4A-203ENST00000545354 DOK3Q7L591 496 aa4.58□□□□□ -1.68
UBE4A-203ENST00000545354 ATG4DQ86TL0 474 aaPredicted RBP4.58□□□□□ -1.68
UBE4A-203ENST00000545354 KCNRGQ8N5I3 272 aa4.58□□□□□ -1.68
UBE4A-203ENST00000545354 FAM71E2Q8N5Q1 922 aa4.58□□□□□ -1.68
UBE4A-203ENST00000545354 TCEANCQ8N8B7 351 aa4.58□□□□□ -1.68
UBE4A-203ENST00000545354 OR1N2Q8NGR9 330 aa4.58□□□□□ -1.68
UBE4A-203ENST00000545354 NEIL3Q8TAT5 605 aa4.58□□□□□ -1.68
UBE4A-203ENST00000545354 IMP4Q96G21 291 aaKnown RBP4.58□□□□□ -1.68
UBE4A-203ENST00000545354 LOXL4Q96JB6 756 aa4.58□□□□□ -1.68
UBE4A-203ENST00000545354 RAB40CQ96S21 281 aa4.58□□□□□ -1.68
UBE4A-203ENST00000545354 HSPB9Q9BQS6 159 aa4.58□□□□□ -1.68
UBE4A-203ENST00000545354 RNF167Q9H6Y7 350 aa4.58□□□□□ -1.68
UBE4A-203ENST00000545354 PILRBQ9UKJ0 227 aa4.58□□□□□ -1.68
UBE4A-203ENST00000545354 SIGLEC7Q9Y286 467 aa4.58□□□□□ -1.68
UBE4A-203ENST00000545354 PARP4Q9UKK3 1724 aaKnown RBP4.58□□□□□ -1.68
UBE4A-203ENST00000545354 PHRF1Q9P1Y6 1649 aaKnown RBP4.58□□□□□ -1.68
UBE4A-203ENST00000545354 TULP4Q9NRJ4 1543 aa4.58□□□□□ -1.68
UBE4A-203ENST00000545354 ZNF878C9JN71 531 aa4.58□□□□□ -1.68
UBE4A-203ENST00000545354 E7EQ34 232 aa4.58□□□□□ -1.68
UBE4A-203ENST00000545354 ZNF561-AS1K7EIQ3 104 aa4.58□□□□□ -1.68
UBE4A-203ENST00000545354 ZNF195O14628 629 aa4.58□□□□□ -1.68
UBE4A-203ENST00000545354 TMPRSS11DO60235 418 aa4.58□□□□□ -1.68
UBE4A-203ENST00000545354 SLC16A7O60669 478 aa4.58□□□□□ -1.68
UBE4A-203ENST00000545354 ENTPD6O75354 484 aa4.58□□□□□ -1.68
UBE4A-203ENST00000545354 ABHD16AO95870 558 aa4.58□□□□□ -1.68
UBE4A-203ENST00000545354 NUDT3O95989 172 aa4.58□□□□□ -1.68
UBE4A-203ENST00000545354 APOA2P02652 100 aa4.58□□□□□ -1.68
UBE4A-203ENST00000545354 FTLP02792 175 aaPredicted RBP4.58□□□□□ -1.68
UBE4A-203ENST00000545354 THBDP07204 575 aa4.58□□□□□ -1.68
UBE4A-203ENST00000545354 CHRM4P08173 479 aa4.58□□□□□ -1.68
UBE4A-203ENST00000545354 WNT2P09544 360 aa4.58□□□□□ -1.68
UBE4A-203ENST00000545354 LAMP1P11279 417 aa4.58□□□□□ -1.68
UBE4A-203ENST00000545354 TPT1P13693 172 aaKnown RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms