RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 FAM90A1Q86YD7 464 aa16.29■□□□□ 0.2
TNFRSF1B-204ENST00000536782 ZNF511Q8NB15 262 aa16.29■□□□□ 0.2
TNFRSF1B-204ENST00000536782 OR8S1Q8NH09 359 aa16.29■□□□□ 0.2
TNFRSF1B-204ENST00000536782 SSMEM1Q8WWF3 244 aa16.29■□□□□ 0.2
TNFRSF1B-204ENST00000536782 WFDC12Q8WWY7 111 aa16.29■□□□□ 0.2
TNFRSF1B-204ENST00000536782 TSSK6Q9BXA6 273 aa16.29■□□□□ 0.2
TNFRSF1B-204ENST00000536782 SIRPDQ9H106 197 aa16.29■□□□□ 0.2
TNFRSF1B-204ENST00000536782 ACOXLQ9NUZ1 547 aa16.29■□□□□ 0.2
TNFRSF1B-204ENST00000536782 C1RLQ9NZP8 487 aa16.29■□□□□ 0.2
TNFRSF1B-204ENST00000536782 DVL1O14640 695 aa16.28■□□□□ 0.2
TNFRSF1B-204ENST00000536782 TBX1O43435 398 aa16.28■□□□□ 0.2
TNFRSF1B-204ENST00000536782 CCNB2O95067 398 aa16.28■□□□□ 0.2
TNFRSF1B-204ENST00000536782 NDUFA7O95182 113 aa16.28■□□□□ 0.2
TNFRSF1B-204ENST00000536782 ECDO95905 644 aaPredicted RBP16.28■□□□□ 0.2
TNFRSF1B-204ENST00000536782 LHBP01229 141 aa16.28■□□□□ 0.2
TNFRSF1B-204ENST00000536782 GYPBP06028 91 aa16.28■□□□□ 0.2
TNFRSF1B-204ENST00000536782 CALB2P22676 271 aa16.28■□□□□ 0.2
TNFRSF1B-204ENST00000536782 GRK5P34947 590 aa16.28■□□□□ 0.2
TNFRSF1B-204ENST00000536782 SLC15A1P46059 708 aa16.28■□□□□ 0.2
TNFRSF1B-204ENST00000536782 CRMP1Q14194 572 aa16.28■□□□□ 0.2
TNFRSF1B-204ENST00000536782 TEX30Q5JUR7 227 aa16.28■□□□□ 0.2
TNFRSF1B-204ENST00000536782 TEX36Q5VZQ5 186 aa16.28■□□□□ 0.2
TNFRSF1B-204ENST00000536782 OLFML2AQ68BL7 652 aa16.28■□□□□ 0.2
TNFRSF1B-204ENST00000536782 ZNF770Q6IQ21 691 aaPredicted RBP16.28■□□□□ 0.2
TNFRSF1B-204ENST00000536782 BTN2A1Q7KYR7 527 aa16.28■□□□□ 0.2
TNFRSF1B-204ENST00000536782 ARHGAP24Q8N264 748 aa16.28■□□□□ 0.2
TNFRSF1B-204ENST00000536782 TBC1D15Q8TC07 691 aa16.28■□□□□ 0.2
TNFRSF1B-204ENST00000536782 LHX4Q969G2 390 aa16.28■□□□□ 0.2
TNFRSF1B-204ENST00000536782 SPSB4Q96A44 273 aa16.28■□□□□ 0.2
TNFRSF1B-204ENST00000536782 NMNAT2Q9BZQ4 307 aa16.28■□□□□ 0.2
TNFRSF1B-204ENST00000536782 BAIAP2Q9UQB8 552 aa16.28■□□□□ 0.2
TNFRSF1B-204ENST00000536782 IGHV1-69DA0A0B4J2H0 117 aa16.27■□□□□ 0.2
TNFRSF1B-204ENST00000536782 B2RBV5 119 aa16.27■□□□□ 0.2
TNFRSF1B-204ENST00000536782 IGHV1-69P01742 117 aa16.27■□□□□ 0.2
TNFRSF1B-204ENST00000536782 SPI1P17947 270 aa16.27■□□□□ 0.2
TNFRSF1B-204ENST00000536782 BLVRAP53004 296 aa16.27■□□□□ 0.2
TNFRSF1B-204ENST00000536782 SLC25A1P53007 311 aa16.27■□□□□ 0.2
TNFRSF1B-204ENST00000536782 RPL15P61313 204 aaKnown RBP16.27■□□□□ 0.2
TNFRSF1B-204ENST00000536782 ARF6P62330 175 aa16.27■□□□□ 0.2
TNFRSF1B-204ENST00000536782 GRB2P62993 217 aaKnown RBP16.27■□□□□ 0.2
TNFRSF1B-204ENST00000536782 RELBQ01201 579 aa16.27■□□□□ 0.2
TNFRSF1B-204ENST00000536782 DEFA6Q01524 100 aa16.27■□□□□ 0.2
TNFRSF1B-204ENST00000536782 SRSF4Q08170 494 aaKnown RBP16.27■□□□□ 0.2
TNFRSF1B-204ENST00000536782 POU4F2Q12837 409 aa16.27■□□□□ 0.2
TNFRSF1B-204ENST00000536782 CYP2R1Q6VVX0 501 aa16.27■□□□□ 0.2
TNFRSF1B-204ENST00000536782 AQP11Q8NBQ7 271 aa16.27■□□□□ 0.2
TNFRSF1B-204ENST00000536782 OR6K6Q8NGW6 343 aa16.27■□□□□ 0.2
TNFRSF1B-204ENST00000536782 RNPEPL1Q9HAU8 725 aa16.27■□□□□ 0.2
TNFRSF1B-204ENST00000536782 KAAG1Q9UBP8 84 aa16.27■□□□□ 0.2
TNFRSF1B-204ENST00000536782 IGHV3OR15-7A0A075B7D8 119 aa16.26■□□□□ 0.19
TNFRSF1B-204ENST00000536782 DHRS12A0PJE2 317 aa16.26■□□□□ 0.19
TNFRSF1B-204ENST00000536782 CLPSL1A2RUU4 121 aa16.26■□□□□ 0.19
TNFRSF1B-204ENST00000536782 ANXA2P07355 339 aaKnown RBP16.26■□□□□ 0.19
TNFRSF1B-204ENST00000536782 CX3CR1P49238 355 aa16.26■□□□□ 0.19
TNFRSF1B-204ENST00000536782 FAM3AP98173 230 aa16.26■□□□□ 0.19
TNFRSF1B-204ENST00000536782 TIGD6Q17RP2 521 aa16.26■□□□□ 0.19
TNFRSF1B-204ENST00000536782 MICBQ29980 383 aa16.26■□□□□ 0.19
TNFRSF1B-204ENST00000536782 SLC16A9Q7RTY1 509 aa16.26■□□□□ 0.19
TNFRSF1B-204ENST00000536782 SCCPDHQ8NBX0 429 aa16.26■□□□□ 0.19
TNFRSF1B-204ENST00000536782 OR2T33Q8NG76 320 aa16.26■□□□□ 0.19
TNFRSF1B-204ENST00000536782 LRRC29Q8WV35 223 aa16.26■□□□□ 0.19
TNFRSF1B-204ENST00000536782 ST8SIA4Q92187 359 aa16.26■□□□□ 0.19
TNFRSF1B-204ENST00000536782 DYRK2Q92630 601 aa16.26■□□□□ 0.19
TNFRSF1B-204ENST00000536782 TOR3AQ9H497 397 aa16.26■□□□□ 0.19
TNFRSF1B-204ENST00000536782 SP140LQ9H930 580 aa16.26■□□□□ 0.19
TNFRSF1B-204ENST00000536782 FCN3O75636 299 aa16.25■□□□□ 0.19
TNFRSF1B-204ENST00000536782 IFNGP01579 166 aa16.25■□□□□ 0.19
TNFRSF1B-204ENST00000536782 CLUP10909 449 aa16.25■□□□□ 0.19
TNFRSF1B-204ENST00000536782 MUC1P15941 1255 aaPredicted RBP16.25■□□□□ 0.19
TNFRSF1B-204ENST00000536782 HSD11B1P28845 292 aa16.25■□□□□ 0.19
TNFRSF1B-204ENST00000536782 MAGEA2P43356 314 aa16.25■□□□□ 0.19
TNFRSF1B-204ENST00000536782 EIF2B1Q14232 305 aaKnown RBP16.25■□□□□ 0.19
TNFRSF1B-204ENST00000536782 PDLIM3Q53GG5 364 aaPredicted RBP16.25■□□□□ 0.19
TNFRSF1B-204ENST00000536782 DPY19L4Q7Z388 723 aa16.25■□□□□ 0.19
TNFRSF1B-204ENST00000536782 C11orf53Q8IXP5 236 aa16.25■□□□□ 0.19
TNFRSF1B-204ENST00000536782 OR1M1Q8NGA1 313 aa16.25■□□□□ 0.19
TNFRSF1B-204ENST00000536782 OR4Q3Q8NH05 313 aa16.25■□□□□ 0.19
TNFRSF1B-204ENST00000536782 SGK3Q96BR1 496 aa16.25■□□□□ 0.19
TNFRSF1B-204ENST00000536782 REEP6Q96HR9 211 aa16.25■□□□□ 0.19
TNFRSF1B-204ENST00000536782 MUC13Q9H3R2 512 aa16.25■□□□□ 0.19
TNFRSF1B-204ENST00000536782 CNTD2Q9H8S5 307 aa16.25■□□□□ 0.19
TNFRSF1B-204ENST00000536782 ARMC1Q9NVT9 282 aa16.25■□□□□ 0.19
TNFRSF1B-204ENST00000536782 PDP1Q9P0J1 537 aaPredicted RBP16.25■□□□□ 0.19
TNFRSF1B-204ENST00000536782 ACTR3BQ9P1U1 418 aa16.25■□□□□ 0.19
TNFRSF1B-204ENST00000536782 RPUSD1Q9UJJ7 312 aaKnown RBP16.25■□□□□ 0.19
TNFRSF1B-204ENST00000536782 A0A0U1RQK1 487 aa16.24■□□□□ 0.19
TNFRSF1B-204ENST00000536782 RIIAD1A6NNX1 92 aa16.24■□□□□ 0.19
TNFRSF1B-204ENST00000536782 TIPRLO75663 272 aa16.24■□□□□ 0.19
TNFRSF1B-204ENST00000536782 SOX14O95416 240 aa16.24■□□□□ 0.19
TNFRSF1B-204ENST00000536782 APOC1P02654 83 aa16.24■□□□□ 0.19
TNFRSF1B-204ENST00000536782 ATP6V1B2P21281 511 aa16.24■□□□□ 0.19
TNFRSF1B-204ENST00000536782 PPP1R8Q12972 351 aaKnown RBP16.24■□□□□ 0.19
TNFRSF1B-204ENST00000536782 OCLNQ16625 522 aa16.24■□□□□ 0.19
TNFRSF1B-204ENST00000536782 CDONQ4KMG0 1287 aa16.24■□□□□ 0.19
TNFRSF1B-204ENST00000536782 BRICD5Q6PL45 260 aa16.24■□□□□ 0.19
TNFRSF1B-204ENST00000536782 WDR86Q86TI4 376 aa16.24■□□□□ 0.19
TNFRSF1B-204ENST00000536782 BCAS4Q8TDM0 211 aa16.24■□□□□ 0.19
TNFRSF1B-204ENST00000536782 CCL13Q99616 98 aa16.24■□□□□ 0.19
TNFRSF1B-204ENST00000536782 CITED1Q99966 193 aa16.24■□□□□ 0.19
TNFRSF1B-204ENST00000536782 DGCR6LQ9BY27 220 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms