RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 COMMD4Q9H0A8 199 aa13.03□□□□□ -0.32
SREK1-209ENST00000520953 NOX4Q9NPH5 578 aa13.03□□□□□ -0.32
SREK1-209ENST00000520953 TRBV5-5A0A0J9YX44 114 aa13.02□□□□□ -0.33
SREK1-209ENST00000520953 GPRIN2O60269 458 aa13.02□□□□□ -0.33
SREK1-209ENST00000520953 ZG16O60844 167 aa13.02□□□□□ -0.33
SREK1-209ENST00000520953 IGKV3-15P01624 115 aa13.02□□□□□ -0.33
SREK1-209ENST00000520953 CECR9P0C854 216 aa13.02□□□□□ -0.33
SREK1-209ENST00000520953 ELK1P19419 428 aa13.02□□□□□ -0.33
SREK1-209ENST00000520953 ASAH1Q13510 395 aa13.02□□□□□ -0.33
SREK1-209ENST00000520953 YIF1BQ5BJH7 314 aa13.02□□□□□ -0.33
SREK1-209ENST00000520953 DMRTC1Q5HYR2 192 aa13.02□□□□□ -0.33
SREK1-209ENST00000520953 GLYATL3Q5SZD4 288 aa13.02□□□□□ -0.33
SREK1-209ENST00000520953 METAP1DQ6UB28 335 aaPredicted RBP13.02□□□□□ -0.33
SREK1-209ENST00000520953 TPRA1Q86W33 373 aa13.02□□□□□ -0.33
SREK1-209ENST00000520953 COMMD2Q86X83 199 aa13.02□□□□□ -0.33
SREK1-209ENST00000520953 C17orf78Q8N4C9 275 aa13.02□□□□□ -0.33
SREK1-209ENST00000520953 ITPKCQ96DU7 683 aa13.02□□□□□ -0.33
SREK1-209ENST00000520953 ERRFI1Q9UJM3 462 aaPredicted RBP13.02□□□□□ -0.33
SREK1-209ENST00000520953 UTP20O75691 2785 aaKnown RBP13.01□□□□□ -0.33
SREK1-209ENST00000520953 IGHV1-18A0A0C4DH31 117 aa13.01□□□□□ -0.33
SREK1-209ENST00000520953 ZNF879B4DU55 563 aa13.01□□□□□ -0.33
SREK1-209ENST00000520953 C16orf97H3BN30 126 aa13.01□□□□□ -0.33
SREK1-209ENST00000520953 THBDP07204 575 aa13.01□□□□□ -0.33
SREK1-209ENST00000520953 CBR1P16152 277 aa13.01□□□□□ -0.33
SREK1-209ENST00000520953 TIMM23BQ5SRD1 257 aa13.01□□□□□ -0.33
SREK1-209ENST00000520953 RFPL4BQ6ZWI9 263 aa13.01□□□□□ -0.33
SREK1-209ENST00000520953 TSEN15Q8WW01 171 aaKnown RBP13.01□□□□□ -0.33
SREK1-209ENST00000520953 ASB5Q8WWX0 329 aa13.01□□□□□ -0.33
SREK1-209ENST00000520953 DERL3Q96Q80 235 aa13.01□□□□□ -0.33
SREK1-209ENST00000520953 UBR5O95071 2799 aaPredicted RBP13.01□□□□□ -0.33
SREK1-209ENST00000520953 SERPINA3P01011 423 aa13.01□□□□□ -0.33
SREK1-209ENST00000520953 COX5BP10606 129 aa13.01□□□□□ -0.33
SREK1-209ENST00000520953 APLNRP35414 380 aa13.01□□□□□ -0.33
SREK1-209ENST00000520953 ERVS71-1P61550 626 aa13.01□□□□□ -0.33
SREK1-209ENST00000520953 IL18Q14116 193 aa13.01□□□□□ -0.33
SREK1-209ENST00000520953 SLC25A35Q3KQZ1 300 aa13.01□□□□□ -0.33
SREK1-209ENST00000520953 C4orf17Q53FE4 359 aa13.01□□□□□ -0.33
SREK1-209ENST00000520953 UNQ9370/PRO34162Q6UXP9 181 aa13.01□□□□□ -0.33
SREK1-209ENST00000520953 DPPA2Q7Z7J5 298 aa13.01□□□□□ -0.33
SREK1-209ENST00000520953 CCDC36Q8IYA8 594 aa13.01□□□□□ -0.33
SREK1-209ENST00000520953 LILRB4Q8NHJ6 448 aa13.01□□□□□ -0.33
SREK1-209ENST00000520953 HAVCR2Q8TDQ0 301 aa13.01□□□□□ -0.33
SREK1-209ENST00000520953 TMEM106AQ96A25 262 aa13.01□□□□□ -0.33
SREK1-209ENST00000520953 NKX3-1Q99801 234 aaPredicted RBP13.01□□□□□ -0.33
SREK1-209ENST00000520953 C11orf54Q9H0W9 315 aaPredicted RBP13.01□□□□□ -0.33
SREK1-209ENST00000520953 ELOVL5Q9NYP7 299 aa13.01□□□□□ -0.33
SREK1-209ENST00000520953 COQ3Q9NZJ6 369 aa13.01□□□□□ -0.33
SREK1-209ENST00000520953 ADAM30Q9UKF2 790 aa13.01□□□□□ -0.33
SREK1-209ENST00000520953 TRAV8-7A0A075B6U6 113 aa13□□□□□ -0.33
SREK1-209ENST00000520953 SYT7O43581 403 aa13□□□□□ -0.33
SREK1-209ENST00000520953 IGLV3-1P01715 115 aa13□□□□□ -0.33
SREK1-209ENST00000520953 ISG15P05161 165 aa13□□□□□ -0.33
SREK1-209ENST00000520953 FAM157BP0CG42 384 aa13□□□□□ -0.33
SREK1-209ENST00000520953 SLC2A2P11168 524 aaPredicted RBP13□□□□□ -0.33
SREK1-209ENST00000520953 HOXB1P14653 301 aaPredicted RBP13□□□□□ -0.33
SREK1-209ENST00000520953 PTBP1P26599 531 aaKnown RBP eCLIP13□□□□□ -0.33
SREK1-209ENST00000520953 CALCRP30988 508 aa13□□□□□ -0.33
SREK1-209ENST00000520953 ZNF92Q03936 586 aa13□□□□□ -0.33
SREK1-209ENST00000520953 RIN1Q13671 783 aa13□□□□□ -0.33
SREK1-209ENST00000520953 HLXQ14774 488 aaPredicted RBP13□□□□□ -0.33
SREK1-209ENST00000520953 PPA1Q15181 289 aa13□□□□□ -0.33
SREK1-209ENST00000520953 Q499Y3 187 aa13□□□□□ -0.33
SREK1-209ENST00000520953 SPATA46Q5T0L3 261 aa13□□□□□ -0.33
SREK1-209ENST00000520953 COLCA1Q6ZS62 124 aa13□□□□□ -0.33
SREK1-209ENST00000520953 Q8N402 240 aa13□□□□□ -0.33
SREK1-209ENST00000520953 GPR148Q8TDV2 347 aa13□□□□□ -0.33
SREK1-209ENST00000520953 KCTD12Q96CX2 325 aaKnown RBP13□□□□□ -0.33
SREK1-209ENST00000520953 C1QTNF5Q9BXJ0 243 aa13□□□□□ -0.33
SREK1-209ENST00000520953 MOB1AQ9H8S9 216 aa13□□□□□ -0.33
SREK1-209ENST00000520953 ATPIF1Q9UII2 106 aa13□□□□□ -0.33
SREK1-209ENST00000520953 STARD10Q9Y365 291 aa13□□□□□ -0.33
SREK1-209ENST00000520953 HEATR1Q9H583 2144 aaKnown RBP13□□□□□ -0.33
SREK1-209ENST00000520953 TRAV1-2A0A0B4J238 106 aa13□□□□□ -0.33
SREK1-209ENST00000520953 A0A1B0GUH1 482 aa13□□□□□ -0.33
SREK1-209ENST00000520953 FAM25AB3EWG3 89 aa13□□□□□ -0.33
SREK1-209ENST00000520953 FAM25CB3EWG5 89 aa13□□□□□ -0.33
SREK1-209ENST00000520953 FAM25GB3EWG6 89 aa13□□□□□ -0.33
SREK1-209ENST00000520953 M0R1B8 84 aa13□□□□□ -0.33
SREK1-209ENST00000520953 PLA2G10O15496 165 aa13□□□□□ -0.33
SREK1-209ENST00000520953 IGLV1-44P01699 117 aa13□□□□□ -0.33
SREK1-209ENST00000520953 HLA-DQB1P01920 261 aa13□□□□□ -0.33
SREK1-209ENST00000520953 UCHL1P09936 223 aa13□□□□□ -0.33
SREK1-209ENST00000520953 UBCP0CG48 685 aaKnown RBP13□□□□□ -0.33
SREK1-209ENST00000520953 RAB3BP20337 219 aa13□□□□□ -0.33
SREK1-209ENST00000520953 ACHEP22303 614 aa13□□□□□ -0.33
SREK1-209ENST00000520953 EIF2B2P49770 351 aaKnown RBP13□□□□□ -0.33
SREK1-209ENST00000520953 ASCL1P50553 236 aa13□□□□□ -0.33
SREK1-209ENST00000520953 SPOCK1Q08629 439 aa13□□□□□ -0.33
SREK1-209ENST00000520953 TNK1Q13470 666 aa13□□□□□ -0.33
SREK1-209ENST00000520953 PAMR1Q6UXH9 720 aa13□□□□□ -0.33
SREK1-209ENST00000520953 ZNF704Q6ZNC4 412 aaPredicted RBP13□□□□□ -0.33
SREK1-209ENST00000520953 STEAP2Q8NFT2 490 aa13□□□□□ -0.33
SREK1-209ENST00000520953 OR13C3Q8NGS6 347 aa13□□□□□ -0.33
SREK1-209ENST00000520953 CA5BP1Q8WTZ4 195 aa13□□□□□ -0.33
SREK1-209ENST00000520953 ADAT3Q96EY9 351 aaPredicted RBP13□□□□□ -0.33
SREK1-209ENST00000520953 CRIM1Q9NZV1 1036 aa13□□□□□ -0.33
SREK1-209ENST00000520953 EXTL2Q9UBQ6 330 aa13□□□□□ -0.33
SREK1-209ENST00000520953 HHLA2Q9UM44 414 aa13□□□□□ -0.33
SREK1-209ENST00000520953 AMDHD2Q9Y303 409 aa13□□□□□ -0.33
SREK1-209ENST00000520953 ANKHD1Q8IWZ3 2542 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms