RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 M0R1B8 84 aa14.88□□□□□ -0.03
PCDHA1-203ENST00000504120 METTL15P1P0C7V9 234 aa14.88□□□□□ -0.03
PCDHA1-203ENST00000504120 FXNQ16595 210 aa14.88□□□□□ -0.03
PCDHA1-203ENST00000504120 OTPQ5XKR4 325 aa14.88□□□□□ -0.03
PCDHA1-203ENST00000504120 APOBEC3DQ96AK3 386 aaPredicted RBP14.88□□□□□ -0.03
PCDHA1-203ENST00000504120 C20orf24Q9BUV8 137 aa14.88□□□□□ -0.03
PCDHA1-203ENST00000504120 ACTR3CQ9C0K3 210 aaPredicted RBP14.88□□□□□ -0.03
PCDHA1-203ENST00000504120 MTCH1Q9NZJ7 389 aa14.88□□□□□ -0.03
PCDHA1-203ENST00000504120 PPP5D1E7EU14 171 aa14.88□□□□□ -0.03
PCDHA1-203ENST00000504120 ZNF354AO60765 605 aaPredicted RBP14.88□□□□□ -0.03
PCDHA1-203ENST00000504120 CD80P33681 288 aa14.88□□□□□ -0.03
PCDHA1-203ENST00000504120 KIAA0141Q14154 515 aaPredicted RBP14.88□□□□□ -0.03
PCDHA1-203ENST00000504120 CEACAM16Q2WEN9 425 aa14.88□□□□□ -0.03
PCDHA1-203ENST00000504120 GALNT16Q8N428 558 aa14.88□□□□□ -0.03
PCDHA1-203ENST00000504120 ARRDC1Q8N5I2 433 aa14.88□□□□□ -0.03
PCDHA1-203ENST00000504120 TPPP3Q9BW30 176 aa14.88□□□□□ -0.03
PCDHA1-203ENST00000504120 SERGEFQ9UGK8 458 aa14.88□□□□□ -0.03
PCDHA1-203ENST00000504120 UMAD1C9J7I0 102 aa14.87□□□□□ -0.03
PCDHA1-203ENST00000504120 H7BYZ3 331 aa14.87□□□□□ -0.03
PCDHA1-203ENST00000504120 TGM1P22735 817 aa14.87□□□□□ -0.03
PCDHA1-203ENST00000504120 TRA2AQ13595 282 aaKnown RBP eCLIP14.87□□□□□ -0.03
PCDHA1-203ENST00000504120 NLRC3Q7RTR2 1065 aa14.87□□□□□ -0.03
PCDHA1-203ENST00000504120 TCTE3Q8IZS6 198 aa14.87□□□□□ -0.03
PCDHA1-203ENST00000504120 FOXB1Q99853 325 aa14.87□□□□□ -0.03
PCDHA1-203ENST00000504120 URGCP-MRPS24S4R325 110 aa14.87□□□□□ -0.03
PCDHA1-203ENST00000504120 ADAMTSL1Q8N6G6 1762 aa14.87□□□□□ -0.03
PCDHA1-203ENST00000504120 HMGA2P52926 109 aa14.87□□□□□ -0.03
PCDHA1-203ENST00000504120 ZNF117Q03924 483 aa14.87□□□□□ -0.03
PCDHA1-203ENST00000504120 ADAM5Q6NVV9 412 aa14.87□□□□□ -0.03
PCDHA1-203ENST00000504120 EDARADDQ8WWZ3 215 aa14.87□□□□□ -0.03
PCDHA1-203ENST00000504120 ARRDC1-AS1Q9H2J1 176 aa14.87□□□□□ -0.03
PCDHA1-203ENST00000504120 PLAC1Q9HBJ0 212 aa14.87□□□□□ -0.03
PCDHA1-203ENST00000504120 ZNF331Q9NQX6 463 aaPredicted RBP14.87□□□□□ -0.03
PCDHA1-203ENST00000504120 COL11A2P13942 1736 aaPredicted RBP14.87□□□□□ -0.03
PCDHA1-203ENST00000504120 ARPC3O15145 178 aa14.87□□□□□ -0.03
PCDHA1-203ENST00000504120 GALR2O43603 387 aaPredicted RBP14.87□□□□□ -0.03
PCDHA1-203ENST00000504120 IL5P05113 134 aa14.87□□□□□ -0.03
PCDHA1-203ENST00000504120 FAHP16930 419 aa14.87□□□□□ -0.03
PCDHA1-203ENST00000504120 BAMBIQ13145 260 aa14.87□□□□□ -0.03
PCDHA1-203ENST00000504120 ZNF239Q16600 458 aaKnown RBP14.87□□□□□ -0.03
PCDHA1-203ENST00000504120 ACOT6Q3I5F7 207 aaPredicted RBP14.87□□□□□ -0.03
PCDHA1-203ENST00000504120 SSX9Q7RTT3 188 aa14.87□□□□□ -0.03
PCDHA1-203ENST00000504120 LINC01555Q8NAE3 123 aa14.87□□□□□ -0.03
PCDHA1-203ENST00000504120 AQP7O14520 342 aa14.87□□□□□ -0.03
PCDHA1-203ENST00000504120 OR2C1O95371 312 aa14.87□□□□□ -0.03
PCDHA1-203ENST00000504120 CTGFP29279 349 aa14.87□□□□□ -0.03
PCDHA1-203ENST00000504120 CD300LDQ6UXZ3 194 aa14.87□□□□□ -0.03
PCDHA1-203ENST00000504120 SPSB1Q96BD6 273 aa14.87□□□□□ -0.03
PCDHA1-203ENST00000504120 TAAR6Q96RI8 345 aa14.87□□□□□ -0.03
PCDHA1-203ENST00000504120 SLIRPQ9GZT3 109 aaKnown RBP14.87□□□□□ -0.03
PCDHA1-203ENST00000504120 DNAJB12Q9NXW2 375 aaKnown RBP14.87□□□□□ -0.03
PCDHA1-203ENST00000504120 CCDC187A0A096LP49 1063 aa14.86□□□□□ -0.03
PCDHA1-203ENST00000504120 CTSVO60911 334 aa14.86□□□□□ -0.03
PCDHA1-203ENST00000504120 CDAP32320 146 aa14.86□□□□□ -0.03
PCDHA1-203ENST00000504120 EXOSC2Q13868 293 aaKnown RBP14.86□□□□□ -0.03
PCDHA1-203ENST00000504120 OR2B11Q5JQS5 317 aa14.86□□□□□ -0.03
PCDHA1-203ENST00000504120 SLC38A6Q8IZM9 456 aa14.86□□□□□ -0.03
PCDHA1-203ENST00000504120 DEFB108BQ8NET1 73 aa14.86□□□□□ -0.03
PCDHA1-203ENST00000504120 GPR32P1Q8NGA4 272 aa14.86□□□□□ -0.03
PCDHA1-203ENST00000504120 OR1F12Q8NHA8 337 aa14.86□□□□□ -0.03
PCDHA1-203ENST00000504120 FBXW5Q969U6 566 aa14.86□□□□□ -0.03
PCDHA1-203ENST00000504120 LRRC37AA6NMS7 1700 aa14.86□□□□□ -0.03
PCDHA1-203ENST00000504120 CLEC3BP05452 202 aa14.86□□□□□ -0.03
PCDHA1-203ENST00000504120 P2RX3P56373 397 aa14.86□□□□□ -0.03
PCDHA1-203ENST00000504120 MYBPHQ13203 477 aa14.86□□□□□ -0.03
PCDHA1-203ENST00000504120 OR2A5Q96R48 311 aa14.86□□□□□ -0.03
PCDHA1-203ENST00000504120 EDEM2Q9BV94 578 aa14.86□□□□□ -0.03
PCDHA1-203ENST00000504120 OCEL1Q9H607 264 aa14.86□□□□□ -0.03
PCDHA1-203ENST00000504120 IGHV3-64DA0A0J9YX35 117 aa14.86□□□□□ -0.03
PCDHA1-203ENST00000504120 PLPP2O43688 288 aa14.86□□□□□ -0.03
PCDHA1-203ENST00000504120 PRICKLE4Q2TBC4 344 aa14.86□□□□□ -0.03
PCDHA1-203ENST00000504120 LINC00303Q3SY05 128 aa14.86□□□□□ -0.03
PCDHA1-203ENST00000504120 TMEM128Q5BJH2 165 aa14.86□□□□□ -0.03
PCDHA1-203ENST00000504120 XAF1Q6GPH4 301 aa14.86□□□□□ -0.03
PCDHA1-203ENST00000504120 ZNF680Q8NEM1 530 aa14.86□□□□□ -0.03
PCDHA1-203ENST00000504120 GPBAR1Q8TDU6 330 aa14.86□□□□□ -0.03
PCDHA1-203ENST00000504120 KIAA1456Q9P272 454 aa14.86□□□□□ -0.03
PCDHA1-203ENST00000504120 TAF1LQ8IZX4 1826 aa14.86□□□□□ -0.03
PCDHA1-203ENST00000504120 KIAA0100Q14667 2235 aaKnown RBP14.86□□□□□ -0.03
PCDHA1-203ENST00000504120 HTRA4P83105 476 aaPredicted RBP14.86□□□□□ -0.03
PCDHA1-203ENST00000504120 HAGHQ16775 308 aa14.86□□□□□ -0.03
PCDHA1-203ENST00000504120 DEFB109BQ30KR1 87 aa14.86□□□□□ -0.03
PCDHA1-203ENST00000504120 SMIM21Q3B7S5 101 aa14.86□□□□□ -0.03
PCDHA1-203ENST00000504120 RPUSD3Q6P087 351 aaKnown RBP14.86□□□□□ -0.03
PCDHA1-203ENST00000504120 LCN15Q6UWW0 184 aa14.86□□□□□ -0.03
PCDHA1-203ENST00000504120 ADGRG3Q86Y34 549 aa14.86□□□□□ -0.03
PCDHA1-203ENST00000504120 FAM173AQ9BQD7 235 aa14.86□□□□□ -0.03
PCDHA1-203ENST00000504120 VN1R1Q9GZP7 353 aa14.86□□□□□ -0.03
PCDHA1-203ENST00000504120 RFC3P40938 356 aa14.86□□□□□ -0.03
PCDHA1-203ENST00000504120 CSN1S1P47710 185 aa14.86□□□□□ -0.03
PCDHA1-203ENST00000504120 TMEM215Q68D42 235 aa14.86□□□□□ -0.03
PCDHA1-203ENST00000504120 MAMSTRQ6ZN01 415 aa14.86□□□□□ -0.03
PCDHA1-203ENST00000504120 AKR7LQ8NHP1 331 aa14.86□□□□□ -0.03
PCDHA1-203ENST00000504120 PPP1R1CQ8WVI7 109 aa14.86□□□□□ -0.03
PCDHA1-203ENST00000504120 LHX4Q969G2 390 aa14.86□□□□□ -0.03
PCDHA1-203ENST00000504120 ALKBH3Q96Q83 286 aaPredicted RBP14.86□□□□□ -0.03
PCDHA1-203ENST00000504120 EXOGQ9Y2C4 368 aaKnown RBP14.86□□□□□ -0.03
PCDHA1-203ENST00000504120 FUT7Q11130 342 aa14.85□□□□□ -0.03
PCDHA1-203ENST00000504120 IL11RAQ14626 422 aa14.85□□□□□ -0.03
PCDHA1-203ENST00000504120 GLCCI1Q86VQ1 547 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms