RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-223ENST00000480525 LSRQ86X29 649 aaPredicted RBP4.32□□□□□ -1.72
HDAC6-223ENST00000480525 FAM90A1Q86YD7 464 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 MUC20Q8N307 709 aaPredicted RBP4.32□□□□□ -1.72
HDAC6-223ENST00000480525 DNAAF1Q8NEP3 725 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 OR8B12Q8NGG6 310 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 OR51G2Q8NGK0 314 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 OR10Z1Q8NGY1 313 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 THEM6Q8WUY1 208 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 NRG4Q8WWG1 115 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 HTRA1Q92743 480 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 RORBQ92753 470 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 RNF166Q96A37 237 aaPredicted RBP4.32□□□□□ -1.72
HDAC6-223ENST00000480525 SGK3Q96BR1 496 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 CMBLQ96DG6 245 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 LGALS12Q96DT0 336 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 ITPKCQ96DU7 683 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 CPNE2Q96FN4 548 aaPredicted RBP4.32□□□□□ -1.72
HDAC6-223ENST00000480525 TIMD4Q96H15 378 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 POM121Q96HA1 1249 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 REEP6Q96HR9 211 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 C18orf12Q96KH6 178 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 AMELYQ99218 206 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 ZNF184Q99676 751 aaPredicted RBP4.32□□□□□ -1.72
HDAC6-223ENST00000480525 RHNO1Q9BSD3 238 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 Q9H521 79 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 DUSP21Q9H596 190 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 SAP30LQ9HAJ7 183 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 ISYNA1Q9NPH2 558 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 CENPMQ9NSP4 180 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 TMEM100Q9NV29 134 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 ERVK13-1Q9NX77 482 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 TAAR3PQ9P1P4 343 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 MYEF2Q9P2K5 600 aaKnown RBP4.32□□□□□ -1.72
HDAC6-223ENST00000480525 NKX1-2Q9UD57 310 aaPredicted RBP4.32□□□□□ -1.72
HDAC6-223ENST00000480525 MRM2Q9UI43 246 aaKnown RBP4.32□□□□□ -1.72
HDAC6-223ENST00000480525 PSORS1C1Q9UIG5 152 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 DUSP13Q9UII6 198 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 COPS3Q9UNS2 423 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 SLC22A13Q9Y226 551 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 V9GYS6 101 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 TEP1Q99973 2627 aaKnown RBP4.32□□□□□ -1.72
HDAC6-223ENST00000480525 C2CD3Q4AC94 2353 aa4.32□□□□□ -1.72
HDAC6-223ENST00000480525 SONP18583 2426 aaKnown RBP4.31□□□□□ -1.72
HDAC6-223ENST00000480525 IGHV1-69-2A0A0G2JMI3 117 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 DAPL1A0PJW8 107 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 ERICH4A6NGS2 130 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 ZSCAN5BA6NJL1 495 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 LRRC30A6NM36 301 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 ANXA2P2A6NMY6 339 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 OR4C45A6NMZ5 311 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 ANKRD30BLA7E2S9 258 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 A8MXK9 166 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 PRR32B1ATL7 298 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 CLDN25C9JDP6 229 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 LOC110117498-PIK3R3F6TDL0 507 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 SLC1A7O00341 560 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 OGG1O15527 345 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 MLNRO43193 412 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 PLPP2O43688 288 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 GPX5O75715 221 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 GATBO75879 557 aaKnown RBP4.31□□□□□ -1.72
HDAC6-223ENST00000480525 INMTO95050 263 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 CLPTM1O96005 669 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 PNPP00491 289 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 LHBP01229 141 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 ADRA2AP08913 450 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 LIMS3P0CW19 117 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 LIMS4P0CW20 117 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 PPIAL4GP0DN37 164 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 MUC1P15941 1255 aaPredicted RBP4.31□□□□□ -1.72
HDAC6-223ENST00000480525 MYL12AP19105 171 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 PSMA1P25786 263 aaKnown RBP4.31□□□□□ -1.72
HDAC6-223ENST00000480525 CDKN1AP38936 164 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 MPV17P39210 176 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 RPS27P42677 84 aaKnown RBP4.31□□□□□ -1.72
HDAC6-223ENST00000480525 GSK3AP49840 483 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 GZMKP49863 264 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 NPY4RP50391 375 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 CHN2P52757 468 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 ERVS71-1P61550 626 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 MVKQ03426 396 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 RIPPLY1Q0D2K3 151 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 TNK1Q13470 666 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 TRAM1Q15629 374 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 TBCEQ15813 527 aaPredicted RBP4.31□□□□□ -1.72
HDAC6-223ENST00000480525 HFEQ30201 348 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 CEACAM21Q3KPI0 293 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 ZIK1Q3SY52 487 aaPredicted RBP4.31□□□□□ -1.72
HDAC6-223ENST00000480525 TMEM255AQ5JRV8 349 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 RBM48Q5RL73 367 aaKnown RBP4.31□□□□□ -1.72
HDAC6-223ENST00000480525 C6orf141Q5SZD1 244 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 GLYATL3Q5SZD4 288 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 BCL2L15Q5TBC7 163 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 TEX36Q5VZQ5 186 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 ZNF529Q6P280 563 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 RPL22L1Q6P5R6 122 aaKnown RBP4.31□□□□□ -1.72
HDAC6-223ENST00000480525 Q6ZR03 302 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 PRSS48Q7RTY5 328 aa4.31□□□□□ -1.72
HDAC6-223ENST00000480525 PEG10Q86TG7 708 aaKnown RBP4.31□□□□□ -1.72
HDAC6-223ENST00000480525 LRP11Q86VZ4 500 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms