RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 Q6ZRM9 215 aa4.93□□□□□ -1.62
HDAC3-206ENST00000471968 ZCCHC23Q6ZST2 131 aa4.93□□□□□ -1.62
HDAC3-206ENST00000471968 TMPRSS11FQ6ZWK6 438 aa4.93□□□□□ -1.62
HDAC3-206ENST00000471968 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.93□□□□□ -1.62
HDAC3-206ENST00000471968 SERPINA11Q86U17 422 aa4.93□□□□□ -1.62
HDAC3-206ENST00000471968 ZBTB46Q86UZ6 589 aa4.93□□□□□ -1.62
HDAC3-206ENST00000471968 DPP10Q8N608 796 aa4.93□□□□□ -1.62
HDAC3-206ENST00000471968 ZNF491Q8N8L2 437 aa4.93□□□□□ -1.62
HDAC3-206ENST00000471968 FBXO36Q8NEA4 188 aa4.93□□□□□ -1.62
HDAC3-206ENST00000471968 OR4M1Q8NGD0 313 aa4.93□□□□□ -1.62
HDAC3-206ENST00000471968 C11orf45Q8TAV5 145 aa4.93□□□□□ -1.62
HDAC3-206ENST00000471968 CDKL2Q92772 493 aa4.93□□□□□ -1.62
HDAC3-206ENST00000471968 ITFG2Q969R8 447 aa4.93□□□□□ -1.62
HDAC3-206ENST00000471968 MFFQ9GZY8 342 aa4.93□□□□□ -1.62
HDAC3-206ENST00000471968 SLC38A1Q9H2H9 487 aa4.93□□□□□ -1.62
HDAC3-206ENST00000471968 TXNIPQ9H3M7 391 aa4.93□□□□□ -1.62
HDAC3-206ENST00000471968 RPS6KB2Q9UBS0 482 aa4.93□□□□□ -1.62
HDAC3-206ENST00000471968 STK38LQ9Y2H1 464 aa4.93□□□□□ -1.62
HDAC3-206ENST00000471968 NOP16Q9Y3C1 178 aaKnown RBP4.93□□□□□ -1.62
HDAC3-206ENST00000471968 IGHV4OR15-8A0A075B7B6 117 aa4.92□□□□□ -1.62
HDAC3-206ENST00000471968 A0A087WW49 117 aa4.92□□□□□ -1.62
HDAC3-206ENST00000471968 IZUMO1RA6ND01 250 aa4.92□□□□□ -1.62
HDAC3-206ENST00000471968 C12orf71A8MTZ7 269 aa4.92□□□□□ -1.62
HDAC3-206ENST00000471968 OR11H12B2RN74 326 aa4.92□□□□□ -1.62
HDAC3-206ENST00000471968 SGCEO43556 437 aa4.92□□□□□ -1.62
HDAC3-206ENST00000471968 SPRY2O43597 315 aa4.92□□□□□ -1.62
HDAC3-206ENST00000471968 GMDSO60547 372 aa4.92□□□□□ -1.62
HDAC3-206ENST00000471968 TIPRLO75663 272 aa4.92□□□□□ -1.62
HDAC3-206ENST00000471968 GAS8-AS1O95177 125 aa4.92□□□□□ -1.62
HDAC3-206ENST00000471968 IFNA14P01570 189 aa4.92□□□□□ -1.62
HDAC3-206ENST00000471968 IGHG4P01861 327 aa4.92□□□□□ -1.62
HDAC3-206ENST00000471968 ACAA1P09110 424 aaPredicted RBP4.92□□□□□ -1.62
HDAC3-206ENST00000471968 CD7P09564 240 aa4.92□□□□□ -1.62
HDAC3-206ENST00000471968 P0DMU3 169 aa4.92□□□□□ -1.62
HDAC3-206ENST00000471968 FAM231AP0DMU4 169 aa4.92□□□□□ -1.62
HDAC3-206ENST00000471968 FAM231CP0DMU5 169 aa4.92□□□□□ -1.62
HDAC3-206ENST00000471968 CTRB1P17538 263 aa4.92□□□□□ -1.62
HDAC3-206ENST00000471968 BGNP21810 368 aa4.92□□□□□ -1.62
HDAC3-206ENST00000471968 HTR1DP28221 377 aa4.92□□□□□ -1.62
HDAC3-206ENST00000471968 ARHGDIBP52566 201 aa4.92□□□□□ -1.62
HDAC3-206ENST00000471968 MFAP2P55001 183 aa4.92□□□□□ -1.62
HDAC3-206ENST00000471968 KRTAP10-2P60368 255 aa4.92□□□□□ -1.62
HDAC3-206ENST00000471968 HBA1P69905 142 aa4.92□□□□□ -1.62
HDAC3-206ENST00000471968 KIAA0141Q14154 515 aaPredicted RBP4.92□□□□□ -1.62
HDAC3-206ENST00000471968 ENDOGQ14249 297 aaKnown RBP4.92□□□□□ -1.62
HDAC3-206ENST00000471968 SYPL1Q16563 259 aa4.92□□□□□ -1.62
HDAC3-206ENST00000471968 CTRB2Q6GPI1 263 aa4.92□□□□□ -1.62
HDAC3-206ENST00000471968 LCN12Q6JVE5 192 aa4.92□□□□□ -1.62
HDAC3-206ENST00000471968 OR5J2Q8NH18 312 aa4.92□□□□□ -1.62
HDAC3-206ENST00000471968 ANGPTL6Q8NI99 470 aa4.92□□□□□ -1.62
HDAC3-206ENST00000471968 APOBEC3DQ96AK3 386 aaPredicted RBP4.92□□□□□ -1.62
HDAC3-206ENST00000471968 MTERF3Q96E29 417 aa4.92□□□□□ -1.62
HDAC3-206ENST00000471968 CCDC140Q96MF4 163 aa4.92□□□□□ -1.62
HDAC3-206ENST00000471968 CCT7Q99832 543 aa4.92□□□□□ -1.62
HDAC3-206ENST00000471968 GGTLC1Q9BX51 225 aa4.92□□□□□ -1.62
HDAC3-206ENST00000471968 MRPL13Q9BYD1 178 aaKnown RBP4.92□□□□□ -1.62
HDAC3-206ENST00000471968 NDEL1Q9GZM8 345 aa4.92□□□□□ -1.62
HDAC3-206ENST00000471968 SLC22A4Q9H015 551 aa4.92□□□□□ -1.62
HDAC3-206ENST00000471968 WDR13Q9H1Z4 485 aa4.92□□□□□ -1.62
HDAC3-206ENST00000471968 KLK15Q9H2R5 256 aa4.92□□□□□ -1.62
HDAC3-206ENST00000471968 RNPEPL1Q9HAU8 725 aa4.92□□□□□ -1.62
HDAC3-206ENST00000471968 CHCHD3Q9NX63 227 aaKnown RBP4.92□□□□□ -1.62
HDAC3-206ENST00000471968 TMCO1Q9UM00 188 aa4.92□□□□□ -1.62
HDAC3-206ENST00000471968 HHLA2Q9UM44 414 aa4.92□□□□□ -1.62
HDAC3-206ENST00000471968 WSB1Q9Y6I7 421 aa4.92□□□□□ -1.62
HDAC3-206ENST00000471968 IGHV4-4A0A075B6R2 117 aa4.91□□□□□ -1.62
HDAC3-206ENST00000471968 MEX3AA1L020 520 aaKnown RBP4.91□□□□□ -1.62
HDAC3-206ENST00000471968 MCIDASD6RGH6 385 aa4.91□□□□□ -1.62
HDAC3-206ENST00000471968 M0R3H8 397 aa4.91□□□□□ -1.62
HDAC3-206ENST00000471968 DNALI1O14645 258 aaPredicted RBP4.91□□□□□ -1.62
HDAC3-206ENST00000471968 TRMUO75648 421 aaKnown RBP4.91□□□□□ -1.62
HDAC3-206ENST00000471968 SCG5P05408 212 aa4.91□□□□□ -1.62
HDAC3-206ENST00000471968 ENO1P06733 434 aaKnown RBP4.91□□□□□ -1.62
HDAC3-206ENST00000471968 GRK5P34947 590 aa4.91□□□□□ -1.62
HDAC3-206ENST00000471968 CHI3L1P36222 383 aaPredicted RBP4.91□□□□□ -1.62
HDAC3-206ENST00000471968 HPCAL1P37235 193 aa4.91□□□□□ -1.62
HDAC3-206ENST00000471968 GUCA1AP43080 201 aaPredicted RBP4.91□□□□□ -1.62
HDAC3-206ENST00000471968 ZNF133P52736 654 aaPredicted RBP4.91□□□□□ -1.62
HDAC3-206ENST00000471968 ACTA2P62736 377 aa4.91□□□□□ -1.62
HDAC3-206ENST00000471968 ACTG2P63267 376 aa4.91□□□□□ -1.62
HDAC3-206ENST00000471968 CSNK2BP67870 215 aa4.91□□□□□ -1.62
HDAC3-206ENST00000471968 ACTC1P68032 377 aa4.91□□□□□ -1.62
HDAC3-206ENST00000471968 ACTA1P68133 377 aa4.91□□□□□ -1.62
HDAC3-206ENST00000471968 SPIBQ01892 262 aa4.91□□□□□ -1.62
HDAC3-206ENST00000471968 CFHR3Q02985 330 aa4.91□□□□□ -1.62
HDAC3-206ENST00000471968 CD47Q08722 323 aa4.91□□□□□ -1.62
HDAC3-206ENST00000471968 SCRN3Q0VDG4 424 aa4.91□□□□□ -1.62
HDAC3-206ENST00000471968 GK2Q14410 553 aaPredicted RBP4.91□□□□□ -1.62
HDAC3-206ENST00000471968 DEFB135Q30KP9 77 aa4.91□□□□□ -1.62
HDAC3-206ENST00000471968 KRT71Q3SY84 523 aa4.91□□□□□ -1.62
HDAC3-206ENST00000471968 LIN52Q52LA3 116 aa4.91□□□□□ -1.62
HDAC3-206ENST00000471968 ZNF678Q5SXM1 525 aa4.91□□□□□ -1.62
HDAC3-206ENST00000471968 GRTP1Q5TC63 336 aa4.91□□□□□ -1.62
HDAC3-206ENST00000471968 LIPMQ5VYY2 423 aa4.91□□□□□ -1.62
HDAC3-206ENST00000471968 NANOGP8Q6NSW7 305 aa4.91□□□□□ -1.62
HDAC3-206ENST00000471968 WDR82Q6UXN9 313 aa4.91□□□□□ -1.62
HDAC3-206ENST00000471968 CCDC80Q76M96 950 aa4.91□□□□□ -1.62
HDAC3-206ENST00000471968 CTAGE3PQ8IX95 158 aa4.91□□□□□ -1.62
HDAC3-206ENST00000471968 C11orf53Q8IXP5 236 aa4.91□□□□□ -1.62
HDAC3-206ENST00000471968 PEX5LQ8IYB4 626 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms