RNA–Protein interactions for RNA: ENST00000461098.1

HCFC1-204, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-204ENST00000461098 WDR82Q6UXN9 313 aa9.6□□□□□ -0.87
HCFC1-204ENST00000461098 SLC36A1Q7Z2H8 476 aa9.6□□□□□ -0.87
HCFC1-204ENST00000461098 ADCK1Q86TW2 530 aa9.6□□□□□ -0.87
HCFC1-204ENST00000461098 OR5T2Q8NGG2 359 aa9.6□□□□□ -0.87
HCFC1-204ENST00000461098 OR51G2Q8NGK0 314 aa9.6□□□□□ -0.87
HCFC1-204ENST00000461098 TSPEARQ8WU66 669 aa9.6□□□□□ -0.87
HCFC1-204ENST00000461098 LRRC29Q8WV35 223 aa9.6□□□□□ -0.87
HCFC1-204ENST00000461098 TLCD1Q96CP7 247 aa9.6□□□□□ -0.87
HCFC1-204ENST00000461098 TPD52L3Q96J77 140 aa9.6□□□□□ -0.87
HCFC1-204ENST00000461098 MAP6Q96JE9 813 aa9.6□□□□□ -0.87
HCFC1-204ENST00000461098 PITX2Q99697 317 aa9.6□□□□□ -0.87
HCFC1-204ENST00000461098 B9D2Q9BPU9 175 aa9.6□□□□□ -0.87
HCFC1-204ENST00000461098 FNDC11Q9BVV2 318 aa9.6□□□□□ -0.87
HCFC1-204ENST00000461098 NPFFR1Q9GZQ6 430 aa9.6□□□□□ -0.87
HCFC1-204ENST00000461098 FAM234AQ9H0X4 552 aa9.6□□□□□ -0.87
HCFC1-204ENST00000461098 RABEP2Q9H5N1 569 aa9.6□□□□□ -0.87
HCFC1-204ENST00000461098 PPP1R3EQ9H7J1 279 aa9.6□□□□□ -0.87
HCFC1-204ENST00000461098 METTL8Q9H825 291 aaKnown RBP9.6□□□□□ -0.87
HCFC1-204ENST00000461098 RAB18Q9NP72 206 aa9.6□□□□□ -0.87
HCFC1-204ENST00000461098 NKIRAS1Q9NYS0 192 aa9.6□□□□□ -0.87
HCFC1-204ENST00000461098 IER3IP1Q9Y5U9 82 aa9.6□□□□□ -0.87
HCFC1-204ENST00000461098 GGT3PA6NGU5 568 aa9.59□□□□□ -0.87
HCFC1-204ENST00000461098 M0R135 149 aa9.59□□□□□ -0.87
HCFC1-204ENST00000461098 BHLHE40O14503 412 aa9.59□□□□□ -0.87
HCFC1-204ENST00000461098 NDUFB3O43676 98 aa9.59□□□□□ -0.87
HCFC1-204ENST00000461098 NDUFB2O95178 105 aa9.59□□□□□ -0.87
HCFC1-204ENST00000461098 OTX1P32242 354 aaPredicted RBP9.59□□□□□ -0.87
HCFC1-204ENST00000461098 CENPAP49450 140 aa9.59□□□□□ -0.87
HCFC1-204ENST00000461098 BMXP51813 675 aa9.59□□□□□ -0.87
HCFC1-204ENST00000461098 CSNK2BP67870 215 aa9.59□□□□□ -0.87
HCFC1-204ENST00000461098 EGFEM1PQ0D2K5 195 aa9.59□□□□□ -0.87
HCFC1-204ENST00000461098 DGUOKQ16854 277 aa9.59□□□□□ -0.87
HCFC1-204ENST00000461098 LRRC23Q53EV4 343 aaPredicted RBP9.59□□□□□ -0.87
HCFC1-204ENST00000461098 ZNF730Q6ZMV8 503 aa9.59□□□□□ -0.87
HCFC1-204ENST00000461098 Q6ZS46 218 aa9.59□□□□□ -0.87
HCFC1-204ENST00000461098 VTCN1Q7Z7D3 282 aa9.59□□□□□ -0.87
HCFC1-204ENST00000461098 OR1M1Q8NGA1 313 aa9.59□□□□□ -0.87
HCFC1-204ENST00000461098 C12orf43Q96C57 262 aaKnown RBP9.59□□□□□ -0.87
HCFC1-204ENST00000461098 ZNF799Q96GE5 643 aa9.59□□□□□ -0.87
HCFC1-204ENST00000461098 FAM46AQ96IP4 442 aaKnown RBP9.59□□□□□ -0.87
HCFC1-204ENST00000461098 DDOQ99489 341 aa9.59□□□□□ -0.87
HCFC1-204ENST00000461098 PARD6BQ9BYG5 372 aa9.59□□□□□ -0.87
HCFC1-204ENST00000461098 SRA1Q9HD15 236 aaKnown RBP9.59□□□□□ -0.87
HCFC1-204ENST00000461098 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.59□□□□□ -0.87
HCFC1-204ENST00000461098 CAPN7Q9Y6W3 813 aa9.59□□□□□ -0.87
HCFC1-204ENST00000461098 V9GYY5 206 aaPredicted RBP9.59□□□□□ -0.87
HCFC1-204ENST00000461098 HUWE1Q7Z6Z7 4374 aaKnown RBP9.59□□□□□ -0.87
HCFC1-204ENST00000461098 IFNA14P01570 189 aa9.58□□□□□ -0.88
HCFC1-204ENST00000461098 PSKH1P11801 424 aa9.58□□□□□ -0.88
HCFC1-204ENST00000461098 CRABP1P29762 137 aa9.58□□□□□ -0.88
HCFC1-204ENST00000461098 TPTEP56180 551 aa9.58□□□□□ -0.88
HCFC1-204ENST00000461098 CD69Q07108 199 aa9.58□□□□□ -0.88
HCFC1-204ENST00000461098 LRRC10Q5BKY1 277 aa9.58□□□□□ -0.88
HCFC1-204ENST00000461098 ZNF788Q6ZQV5 615 aa9.58□□□□□ -0.88
HCFC1-204ENST00000461098 LIAT1Q6ZQX7 453 aa9.58□□□□□ -0.88
HCFC1-204ENST00000461098 ZBTB46Q86UZ6 589 aa9.58□□□□□ -0.88
HCFC1-204ENST00000461098 OR8J3Q8NGG0 315 aa9.58□□□□□ -0.88
HCFC1-204ENST00000461098 OR56B2PQ8NGI1 322 aa9.58□□□□□ -0.88
HCFC1-204ENST00000461098 H1FXQ92522 213 aaKnown RBP9.58□□□□□ -0.88
HCFC1-204ENST00000461098 DUS3LQ96G46 650 aaKnown RBP9.58□□□□□ -0.88
HCFC1-204ENST00000461098 GAFA1Q96PS6 74 aa9.58□□□□□ -0.88
HCFC1-204ENST00000461098 NKX3-1Q99801 234 aaPredicted RBP9.58□□□□□ -0.88
HCFC1-204ENST00000461098 OCSTAMPQ9BR26 566 aa9.58□□□□□ -0.88
HCFC1-204ENST00000461098 TLNRD1Q9H1K6 362 aa9.58□□□□□ -0.88
HCFC1-204ENST00000461098 WDR13Q9H1Z4 485 aa9.58□□□□□ -0.88
HCFC1-204ENST00000461098 C14orf119Q9NWQ9 140 aa9.58□□□□□ -0.88
HCFC1-204ENST00000461098 MRPL22Q9NWU5 206 aaKnown RBP9.58□□□□□ -0.88
HCFC1-204ENST00000461098 SF3B6Q9Y3B4 125 aaKnown RBP9.58□□□□□ -0.88
HCFC1-204ENST00000461098 IFNA8P32881 189 aa9.57□□□□□ -0.88
HCFC1-204ENST00000461098 OMPP47874 163 aa9.57□□□□□ -0.88
HCFC1-204ENST00000461098 MXRA7P84157 204 aa9.57□□□□□ -0.88
HCFC1-204ENST00000461098 CD83Q01151 205 aa9.57□□□□□ -0.88
HCFC1-204ENST00000461098 CYLC2Q14093 348 aaPredicted RBP9.57□□□□□ -0.88
HCFC1-204ENST00000461098 ERICH5Q6P6B1 374 aa9.57□□□□□ -0.88
HCFC1-204ENST00000461098 DPY19L2P2Q6ZN68 376 aa9.57□□□□□ -0.88
HCFC1-204ENST00000461098 DPY19L4Q7Z388 723 aa9.57□□□□□ -0.88
HCFC1-204ENST00000461098 CROCCP2Q86T23 111 aa9.57□□□□□ -0.88
HCFC1-204ENST00000461098 DYNAPQ8N1N2 210 aa9.57□□□□□ -0.88
HCFC1-204ENST00000461098 LNX2Q8N448 690 aa9.57□□□□□ -0.88
HCFC1-204ENST00000461098 C11orf42Q8N5U0 333 aa9.57□□□□□ -0.88
HCFC1-204ENST00000461098 OR9Q1Q8NGQ5 310 aa9.57□□□□□ -0.88
HCFC1-204ENST00000461098 SPSB4Q96A44 273 aa9.57□□□□□ -0.88
HCFC1-204ENST00000461098 NMNAT3Q96T66 252 aa9.57□□□□□ -0.88
HCFC1-204ENST00000461098 CDCA4Q9BXL8 241 aa9.57□□□□□ -0.88
HCFC1-204ENST00000461098 DNTTIP1Q9H147 329 aa9.57□□□□□ -0.88
HCFC1-204ENST00000461098 HAO2Q9NYQ3 351 aa9.57□□□□□ -0.88
HCFC1-204ENST00000461098 STAB2Q8WWQ8 2551 aa9.57□□□□□ -0.88
HCFC1-204ENST00000461098 CSMD3Q7Z407 3707 aa9.56□□□□□ -0.88
HCFC1-204ENST00000461098 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.56□□□□□ -0.88
HCFC1-204ENST00000461098 A0A1W2PRX2 142 aa9.56□□□□□ -0.88
HCFC1-204ENST00000461098 VGLL3A8MV65 326 aa9.56□□□□□ -0.88
HCFC1-204ENST00000461098 CDIPTO14735 213 aa9.56□□□□□ -0.88
HCFC1-204ENST00000461098 ANGPTL7O43827 346 aa9.56□□□□□ -0.88
HCFC1-204ENST00000461098 IFNW1P05000 195 aa9.56□□□□□ -0.88
HCFC1-204ENST00000461098 GRK5P34947 590 aa9.56□□□□□ -0.88
HCFC1-204ENST00000461098 RPS27P42677 84 aaKnown RBP9.56□□□□□ -0.88
HCFC1-204ENST00000461098 RAB13P51153 203 aa9.56□□□□□ -0.88
HCFC1-204ENST00000461098 CAV3P56539 151 aa9.56□□□□□ -0.88
HCFC1-204ENST00000461098 MZT1Q08AG7 82 aa9.56□□□□□ -0.88
HCFC1-204ENST00000461098 TCTEX1D4Q5JR98 221 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 131.4 ms