RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 SFRP4Q6FHJ7 346 aaPredicted RBP16.48■□□□□ 0.23
SEMA3D-202ENST00000444867 OR10K2Q6IF99 312 aa16.48■□□□□ 0.23
SEMA3D-202ENST00000444867 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.48■□□□□ 0.23
SEMA3D-202ENST00000444867 PNLDC1Q8NA58 520 aaKnown RBP16.48■□□□□ 0.23
SEMA3D-202ENST00000444867 AKR7LQ8NHP1 331 aa16.48■□□□□ 0.23
SEMA3D-202ENST00000444867 ING3Q9NXR8 418 aa16.48■□□□□ 0.23
SEMA3D-202ENST00000444867 ZNF175Q9Y473 711 aa16.48■□□□□ 0.23
SEMA3D-202ENST00000444867 PEX14O75381 377 aa16.48■□□□□ 0.23
SEMA3D-202ENST00000444867 AKAIN1P0CW23 69 aa16.48■□□□□ 0.23
SEMA3D-202ENST00000444867 ARF1P84077 181 aaKnown RBP16.48■□□□□ 0.23
SEMA3D-202ENST00000444867 CBX3Q13185 183 aa16.48■□□□□ 0.23
SEMA3D-202ENST00000444867 GSG1Q2KHT4 349 aa16.48■□□□□ 0.23
SEMA3D-202ENST00000444867 SNAI3Q3KNW1 292 aa16.48■□□□□ 0.23
SEMA3D-202ENST00000444867 TMEM255AQ5JRV8 349 aa16.48■□□□□ 0.23
SEMA3D-202ENST00000444867 KCNG3Q8TAE7 436 aa16.48■□□□□ 0.23
SEMA3D-202ENST00000444867 SEH1LQ96EE3 360 aa16.48■□□□□ 0.23
SEMA3D-202ENST00000444867 RANGRFQ9HD47 186 aaPredicted RBP16.48■□□□□ 0.23
SEMA3D-202ENST00000444867 PIGLQ9Y2B2 252 aa16.48■□□□□ 0.23
SEMA3D-202ENST00000444867 TRAV17A0A0B4J275 112 aa16.47■□□□□ 0.23
SEMA3D-202ENST00000444867 IGKV1-9A0A0C4DH69 117 aa16.47■□□□□ 0.23
SEMA3D-202ENST00000444867 A8MV72 311 aaPredicted RBP16.47■□□□□ 0.23
SEMA3D-202ENST00000444867 RAB27BO00194 218 aa16.47■□□□□ 0.23
SEMA3D-202ENST00000444867 IGHG3P01860 377 aa16.47■□□□□ 0.23
SEMA3D-202ENST00000444867 LCATP04180 440 aa16.47■□□□□ 0.23
SEMA3D-202ENST00000444867 CHRM2P08172 466 aa16.47■□□□□ 0.23
SEMA3D-202ENST00000444867 FCGR2AP12318 317 aa16.47■□□□□ 0.23
SEMA3D-202ENST00000444867 ALDH3B1P43353 468 aa16.47■□□□□ 0.23
SEMA3D-202ENST00000444867 GUCA2AQ02747 115 aa16.47■□□□□ 0.23
SEMA3D-202ENST00000444867 CLN3Q13286 438 aa16.47■□□□□ 0.23
SEMA3D-202ENST00000444867 KCNJ8Q15842 424 aa16.47■□□□□ 0.23
SEMA3D-202ENST00000444867 RNFT1Q5M7Z0 435 aa16.47■□□□□ 0.23
SEMA3D-202ENST00000444867 SFRP5Q5T4F7 317 aa16.47■□□□□ 0.23
SEMA3D-202ENST00000444867 GLIPR1L1Q6UWM5 242 aa16.47■□□□□ 0.23
SEMA3D-202ENST00000444867 ZNF101Q8IZC7 436 aa16.47■□□□□ 0.23
SEMA3D-202ENST00000444867 TMEM229BQ8NBD8 167 aa16.47■□□□□ 0.23
SEMA3D-202ENST00000444867 SEMA6DQ8NFY4 1073 aa16.47■□□□□ 0.23
SEMA3D-202ENST00000444867 AQP3Q92482 292 aa16.47■□□□□ 0.23
SEMA3D-202ENST00000444867 GPER1Q99527 375 aa16.47■□□□□ 0.23
SEMA3D-202ENST00000444867 MED28Q9H204 178 aa16.47■□□□□ 0.23
SEMA3D-202ENST00000444867 MCUBQ9NWR8 336 aa16.47■□□□□ 0.23
SEMA3D-202ENST00000444867 DLL3Q9NYJ7 618 aa16.47■□□□□ 0.23
SEMA3D-202ENST00000444867 ZNF224Q9NZL3 707 aa16.47■□□□□ 0.23
SEMA3D-202ENST00000444867 SPRR3Q9UBC9 169 aa16.47■□□□□ 0.23
SEMA3D-202ENST00000444867 UPB1Q9UBR1 384 aa16.47■□□□□ 0.23
SEMA3D-202ENST00000444867 ARHGAP21Q5T5U3 1957 aa16.47■□□□□ 0.23
SEMA3D-202ENST00000444867 NDUFB6O95139 128 aa16.46■□□□□ 0.23
SEMA3D-202ENST00000444867 IGHV3-9P01782 118 aa16.46■□□□□ 0.23
SEMA3D-202ENST00000444867 MELTFP08582 738 aa16.46■□□□□ 0.23
SEMA3D-202ENST00000444867 GTF2F2P13984 249 aa16.46■□□□□ 0.23
SEMA3D-202ENST00000444867 FAHP16930 419 aa16.46■□□□□ 0.23
SEMA3D-202ENST00000444867 ZNF24P17028 368 aa16.46■□□□□ 0.23
SEMA3D-202ENST00000444867 STOMP27105 288 aa16.46■□□□□ 0.23
SEMA3D-202ENST00000444867 TAS2R19P59542 299 aa16.46■□□□□ 0.23
SEMA3D-202ENST00000444867 CD83Q01151 205 aa16.46■□□□□ 0.23
SEMA3D-202ENST00000444867 RIPPLY1Q0D2K3 151 aa16.46■□□□□ 0.23
SEMA3D-202ENST00000444867 CAMK2BQ13554 666 aa16.46■□□□□ 0.23
SEMA3D-202ENST00000444867 RSPO4Q2I0M5 234 aaPredicted RBP16.46■□□□□ 0.23
SEMA3D-202ENST00000444867 ZNF260Q3ZCT1 412 aa16.46■□□□□ 0.23
SEMA3D-202ENST00000444867 CD276Q5ZPR3 534 aa16.46■□□□□ 0.23
SEMA3D-202ENST00000444867 FGD2Q7Z6J4 655 aa16.46■□□□□ 0.23
SEMA3D-202ENST00000444867 ZNF100Q8IYN0 542 aa16.46■□□□□ 0.23
SEMA3D-202ENST00000444867 OR4C16Q8NGL9 310 aa16.46■□□□□ 0.23
SEMA3D-202ENST00000444867 FGFBP3Q8TAT2 258 aa16.46■□□□□ 0.23
SEMA3D-202ENST00000444867 ITFG2Q969R8 447 aa16.46■□□□□ 0.23
SEMA3D-202ENST00000444867 REEP6Q96HR9 211 aa16.46■□□□□ 0.23
SEMA3D-202ENST00000444867 C1orf147Q96MC9 270 aaPredicted RBP16.46■□□□□ 0.23
SEMA3D-202ENST00000444867 TRAF4Q9BUZ4 470 aaPredicted RBP16.46■□□□□ 0.23
SEMA3D-202ENST00000444867 OR51J1Q9H342 316 aa16.46■□□□□ 0.23
SEMA3D-202ENST00000444867 MYEF2Q9P2K5 600 aaKnown RBP16.46■□□□□ 0.23
SEMA3D-202ENST00000444867 ZNF407Q9C0G0 2248 aa16.46■□□□□ 0.23
SEMA3D-202ENST00000444867 CEACAM4O75871 244 aa16.45■□□□□ 0.22
SEMA3D-202ENST00000444867 PATE4P0C8F1 98 aa16.45■□□□□ 0.22
SEMA3D-202ENST00000444867 COX5BP10606 129 aa16.45■□□□□ 0.22
SEMA3D-202ENST00000444867 OR3A4PP47883 348 aa16.45■□□□□ 0.22
SEMA3D-202ENST00000444867 KISS1Q15726 138 aa16.45■□□□□ 0.22
SEMA3D-202ENST00000444867 C3AR1Q16581 482 aa16.45■□□□□ 0.22
SEMA3D-202ENST00000444867 MOGAT2Q3SYC2 334 aa16.45■□□□□ 0.22
SEMA3D-202ENST00000444867 PABPC1L2AQ5JQF8 200 aa16.45■□□□□ 0.22
SEMA3D-202ENST00000444867 ACBD4Q8NC06 268 aa16.45■□□□□ 0.22
SEMA3D-202ENST00000444867 GIMAP1Q8WWP7 306 aa16.45■□□□□ 0.22
SEMA3D-202ENST00000444867 DNAJC13O75165 2243 aa16.45■□□□□ 0.22
SEMA3D-202ENST00000444867 A0A1B0GUH1 482 aa16.45■□□□□ 0.22
SEMA3D-202ENST00000444867 SLC22A20A6NK97 555 aa16.45■□□□□ 0.22
SEMA3D-202ENST00000444867 XRCC2O43543 280 aa16.45■□□□□ 0.22
SEMA3D-202ENST00000444867 TGM6O95932 706 aa16.45■□□□□ 0.22
SEMA3D-202ENST00000444867 MECP2P51608 486 aaKnown RBP16.45■□□□□ 0.22
SEMA3D-202ENST00000444867 HGFACQ04756 655 aa16.45■□□□□ 0.22
SEMA3D-202ENST00000444867 MAB21L1Q13394 359 aa16.45■□□□□ 0.22
SEMA3D-202ENST00000444867 UBE2V2Q15819 145 aa16.45■□□□□ 0.22
SEMA3D-202ENST00000444867 LINC00303Q3SY05 128 aa16.45■□□□□ 0.22
SEMA3D-202ENST00000444867 DPPA2Q7Z7J5 298 aa16.45■□□□□ 0.22
SEMA3D-202ENST00000444867 OR10R2Q8NGX6 335 aa16.45■□□□□ 0.22
SEMA3D-202ENST00000444867 SPSB1Q96BD6 273 aa16.45■□□□□ 0.22
SEMA3D-202ENST00000444867 CPNE2Q96FN4 548 aaPredicted RBP16.45■□□□□ 0.22
SEMA3D-202ENST00000444867 FYTTD1Q96QD9 318 aaKnown RBP16.45■□□□□ 0.22
SEMA3D-202ENST00000444867 SPACA5Q96QH8 159 aa16.45■□□□□ 0.22
SEMA3D-202ENST00000444867 GAL3ST1Q99999 423 aa16.45■□□□□ 0.22
SEMA3D-202ENST00000444867 PRDM14Q9GZV8 571 aa16.45■□□□□ 0.22
SEMA3D-202ENST00000444867 NOX3Q9HBY0 568 aa16.45■□□□□ 0.22
SEMA3D-202ENST00000444867 POU2F3Q9UKI9 436 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms