RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 ZNF561Q8N587 486 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 POMGNT2Q8NAT1 580 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 RELL2Q8NC24 303 aaPredicted RBP3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 BHLHE23Q8NDY6 225 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 OR2M7Q8NG81 312 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 OR52M1Q8NGK5 317 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 OR9A4Q8NGU2 314 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 RHOXF1Q8NHV9 184 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 LKAAEAR1Q8TD35 194 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 PAQR8Q8TEZ7 354 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 SKA2Q8WVK7 121 aaPredicted RBP3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 TRUB1Q8WWH5 349 aaKnown RBP3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 LIPHQ8WWY8 451 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 C22orf15Q8WYQ4 148 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 SMPDL3AQ92484 453 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 CORO2AQ92828 525 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 NTNG2Q96CW9 530 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 PPP3R2Q96LZ3 170 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 NEDD4LQ96PU5 975 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 ZBTB18Q99592 522 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 ECSITQ9BQ95 431 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 PELOQ9BRX2 385 aaKnown RBP3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 PDCD10Q9BUL8 212 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 TTTY12Q9BZ98 90 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 COQ10BQ9H8M1 238 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 CTPS2Q9NRF8 586 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 YAE1D1Q9NRH1 226 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 MAT2BQ9NZL9 334 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 DNAJB9Q9UBS3 223 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 PCYOX1Q9UHG3 505 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 FBXW2Q9UKT8 454 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 MGAT4AQ9UM21 535 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 CELA1Q9UNI1 258 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 BAIAP2Q9UQB8 552 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 STARD10Q9Y365 291 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 POLR3HQ9Y535 204 aaPredicted RBP3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 ASB4Q9Y574 426 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 PUS1Q9Y606 427 aaKnown RBP eCLIP3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 ALG5Q9Y673 324 aa3.65□□□□□ -1.83
HMGB3P5-201ENST00000428894 ATP6AP2A0A1C7CYW4 349 aa3.64□□□□□ -1.83
HMGB3P5-201ENST00000428894 A0A1W2PPV9 198 aa3.64□□□□□ -1.83
HMGB3P5-201ENST00000428894 TRBC2A0A5B9 178 aa3.64□□□□□ -1.83
HMGB3P5-201ENST00000428894 ISPDA4D126 451 aa3.64□□□□□ -1.83
HMGB3P5-201ENST00000428894 RFPL4AA6NLU0 287 aa3.64□□□□□ -1.83
HMGB3P5-201ENST00000428894 OR2AT4A6NND4 320 aa3.64□□□□□ -1.83
HMGB3P5-201ENST00000428894 CENPXA8MT69 81 aa3.64□□□□□ -1.83
HMGB3P5-201ENST00000428894 ARHGEF33A8MVX0 844 aa3.64□□□□□ -1.83
HMGB3P5-201ENST00000428894 SUPT3HB4E1H0 165 aa3.64□□□□□ -1.83
HMGB3P5-201ENST00000428894 NPIPA7E9PJI5 369 aa3.64□□□□□ -1.83
HMGB3P5-201ENST00000428894 RFPL4AL1F8VTS6 287 aa3.64□□□□□ -1.83
HMGB3P5-201ENST00000428894 H3BMM5 538 aa3.64□□□□□ -1.83
HMGB3P5-201ENST00000428894 CCDC188H7C350 402 aa3.64□□□□□ -1.83
HMGB3P5-201ENST00000428894 SGK494L7N484 410 aa3.64□□□□□ -1.83
HMGB3P5-201ENST00000428894 PSMD12O00232 456 aaPredicted RBP3.64□□□□□ -1.83
HMGB3P5-201ENST00000428894 UBE2CO00762 179 aa3.64□□□□□ -1.83
HMGB3P5-201ENST00000428894 CHP2O43745 196 aa3.64□□□□□ -1.83
HMGB3P5-201ENST00000428894 ZNF354AO60765 605 aaPredicted RBP3.64□□□□□ -1.83
HMGB3P5-201ENST00000428894 SPAG7O75391 227 aa3.64□□□□□ -1.83
HMGB3P5-201ENST00000428894 MED6O75586 246 aa3.64□□□□□ -1.83
HMGB3P5-201ENST00000428894 TNFAIP8O95379 198 aa3.64□□□□□ -1.83
HMGB3P5-201ENST00000428894 SLC35G6P0C7Q6 338 aa3.64□□□□□ -1.83
HMGB3P5-201ENST00000428894 LINC00614P0C842 121 aa3.64□□□□□ -1.83
HMGB3P5-201ENST00000428894 STAG3L2P0CL84 134 aa3.64□□□□□ -1.83
HMGB3P5-201ENST00000428894 NPIPA8P0DM63 369 aa3.64□□□□□ -1.83
HMGB3P5-201ENST00000428894 PSKH1P11801 424 aa3.64□□□□□ -1.83
HMGB3P5-201ENST00000428894 CCNOP22674 350 aa3.64□□□□□ -1.83
HMGB3P5-201ENST00000428894 CPN2P22792 545 aa3.64□□□□□ -1.83
HMGB3P5-201ENST00000428894 PSMB5P28074 263 aa3.64□□□□□ -1.83
HMGB3P5-201ENST00000428894 PPP2R1BP30154 601 aa3.64□□□□□ -1.83
HMGB3P5-201ENST00000428894 GPR183P32249 361 aa3.64□□□□□ -1.83
HMGB3P5-201ENST00000428894 MC5RP33032 325 aa3.64□□□□□ -1.83
HMGB3P5-201ENST00000428894 SLC1A2P43004 574 aa3.64□□□□□ -1.83
HMGB3P5-201ENST00000428894 MAGEA5P43359 124 aa3.64□□□□□ -1.83
HMGB3P5-201ENST00000428894 ZNF41P51814 821 aaPredicted RBP3.64□□□□□ -1.83
HMGB3P5-201ENST00000428894 PPP5CP53041 499 aa3.64□□□□□ -1.83
HMGB3P5-201ENST00000428894 DIO3P55073 304 aa3.64□□□□□ -1.83
HMGB3P5-201ENST00000428894 AP3S2P59780 193 aa3.64□□□□□ -1.83
HMGB3P5-201ENST00000428894 PSPHP78330 225 aa3.64□□□□□ -1.83
HMGB3P5-201ENST00000428894 TNFRSF17Q02223 184 aa3.64□□□□□ -1.83
HMGB3P5-201ENST00000428894 NPRL3Q12980 569 aa3.64□□□□□ -1.83
HMGB3P5-201ENST00000428894 TNK1Q13470 666 aa3.64□□□□□ -1.83
HMGB3P5-201ENST00000428894 ZNF846Q147U1 533 aa3.64□□□□□ -1.83
HMGB3P5-201ENST00000428894 USF2Q15853 346 aaPredicted RBP3.64□□□□□ -1.83
HMGB3P5-201ENST00000428894 HSD17B12Q53GQ0 312 aa3.64□□□□□ -1.83
HMGB3P5-201ENST00000428894 AGBL2Q5U5Z8 902 aa3.64□□□□□ -1.83
HMGB3P5-201ENST00000428894 LRRC38Q5VT99 294 aa3.64□□□□□ -1.83
HMGB3P5-201ENST00000428894 ANKRD26P1Q6NSI1 321 aa3.64□□□□□ -1.83
HMGB3P5-201ENST00000428894 SCIMPQ6UWF3 145 aa3.64□□□□□ -1.83
HMGB3P5-201ENST00000428894 OTOAQ7RTW8 1153 aa3.64□□□□□ -1.83
HMGB3P5-201ENST00000428894 ADCK2Q7Z695 626 aa3.64□□□□□ -1.83
HMGB3P5-201ENST00000428894 TMEM17Q86X19 198 aa3.64□□□□□ -1.83
HMGB3P5-201ENST00000428894 PIANPQ8IYJ0 282 aa3.64□□□□□ -1.83
HMGB3P5-201ENST00000428894 ZNF679Q8IYX0 411 aa3.64□□□□□ -1.83
HMGB3P5-201ENST00000428894 TMEM251Q8N6I4 163 aa3.64□□□□□ -1.83
HMGB3P5-201ENST00000428894 CSNK1G2-AS1Q8NCQ2 148 aa3.64□□□□□ -1.83
HMGB3P5-201ENST00000428894 B3GNT7Q8NFL0 401 aa3.64□□□□□ -1.83
HMGB3P5-201ENST00000428894 BPIFCQ8NFQ6 507 aa3.64□□□□□ -1.83
HMGB3P5-201ENST00000428894 ZNF596Q8TC21 504 aa3.64□□□□□ -1.83
HMGB3P5-201ENST00000428894 SGTBQ96EQ0 304 aa3.64□□□□□ -1.83
HMGB3P5-201ENST00000428894 MRPL48Q96GC5 212 aaKnown RBP3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms