RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 OR4C11Q6IEV9 310 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 ZNF770Q6IQ21 691 aaPredicted RBP4.01□□□□□ -1.77
SF3B1-202ENST00000409915 TMEM205Q6UW68 189 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 DGAT2L6Q6ZPD8 337 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 C17orf107Q6ZR85 190 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 IL17RELQ6ZVW7 336 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 ASB18Q6ZVZ8 466 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 Q6ZWC4 215 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 CPEB2Q7Z5Q1 589 aaKnown RBP4.01□□□□□ -1.77
SF3B1-202ENST00000409915 LHFPL4Q7Z7J7 247 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 ATG4DQ86TL0 474 aaPredicted RBP4.01□□□□□ -1.77
SF3B1-202ENST00000409915 SPAG16Q8N0X2 631 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 SCARB1Q8WTV0 552 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 TNFRSF14Q92956 283 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 CREB3L1Q96BA8 519 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 ROPN1LQ96C74 230 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 CCDC126Q96EE4 140 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 COQ2Q96H96 371 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 BOD1Q96IK1 185 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 FAM210BQ96KR6 192 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 ZNF354BQ96LW1 612 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 C3orf30Q96M34 536 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 GGACTQ9BVM4 153 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 DGCR6LQ9BY27 220 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 SLC29A3Q9BZD2 475 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 ACTR6Q9GZN1 396 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 CCDC90BQ9GZT6 254 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 TOLLIPQ9H0E2 274 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 TUBB1Q9H4B7 451 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 PPP1R3EQ9H7J1 279 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 ELOVL3Q9HB03 270 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 Q9N2K0 584 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 RAB18Q9NP72 206 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 ACOT13Q9NPJ3 140 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 PRTFDC1Q9NRG1 225 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 MED17Q9NVC6 651 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 RBFOX1Q9NWB1 397 aaKnown RBP4.01□□□□□ -1.77
SF3B1-202ENST00000409915 HIF1ANQ9NWT6 349 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 GHRLQ9UBU3 117 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 KCNIP3Q9Y2W7 256 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 TPRKBQ9Y3C4 175 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 MRPS18CQ9Y3D5 142 aaKnown RBP4.01□□□□□ -1.77
SF3B1-202ENST00000409915 RHBDD3Q9Y3P4 386 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 POLR3HQ9Y535 204 aaPredicted RBP4.01□□□□□ -1.77
SF3B1-202ENST00000409915 CSAG2Q9Y5P2 127 aa4.01□□□□□ -1.77
SF3B1-202ENST00000409915 SCN2AQ99250 2005 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 ZNF462Q96JM2 2506 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 TRGV11A0A075B6L2 103 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 IQCMA0A1B0GVH7 501 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 A0A1B0GW55 424 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 A0A1W2PPV4 95 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 CD8B2A6NJW9 211 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 F8VVB4 439 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 F8VWA3 439 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 NPIPB9F8W1W9 429 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 H7C417 338 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 WWP2O00308 870 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 AZIN1O14977 448 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 FABP7O15540 132 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 DLEU1O43261 78 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 PPIHO43447 177 aaKnown RBP4□□□□□ -1.77
SF3B1-202ENST00000409915 ORC5O43913 435 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 PCDH7O60245 1069 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 PRKNO60260 465 aaPredicted RBP4□□□□□ -1.77
SF3B1-202ENST00000409915 CTNSO60931 367 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 ATP6AP2O75787 350 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 SC5DO75845 299 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 CEACAM4O75871 244 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 CLIC3O95833 236 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 CFDP00746 253 aaPredicted RBP4□□□□□ -1.77
SF3B1-202ENST00000409915 CRYBA1P05813 215 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 GUSBP08236 651 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 IL3P08700 152 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 LINC00032P0C843 101 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 DUX4L2P0CJ85 424 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 DUX4L3P0CJ86 424 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 DUX4L4P0CJ87 422 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 DUX4L5P0CJ88 424 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 DUX4L6P0CJ89 424 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 DUX4L7P0CJ90 424 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 RCC1P18754 421 aaPredicted RBP4□□□□□ -1.77
SF3B1-202ENST00000409915 RAB3BP20337 219 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 ATP6V1B2P21281 511 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 LCN1P31025 176 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 S100A11P31949 105 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 PTGER4P35408 488 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 GPR12P47775 334 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 SLC6A8P48029 635 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 MMP15P51511 669 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 RGS8P57771 180 aaPredicted RBP4□□□□□ -1.77
SF3B1-202ENST00000409915 PKIAP61925 76 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 RAB11AP62491 216 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 RBX1P62877 108 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 RPL38P63173 70 aaKnown RBP4□□□□□ -1.77
SF3B1-202ENST00000409915 TNFRSF9Q07011 255 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 CRYZQ08257 329 aaKnown RBP4□□□□□ -1.77
SF3B1-202ENST00000409915 CD47Q08722 323 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 VEZF1Q14119 521 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 SERTAD2Q14140 314 aa4□□□□□ -1.77
SF3B1-202ENST00000409915 GANABQ14697 944 aaKnown RBP4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms