RNA–Protein interactions for RNA: ENST00000398452.6

SKA1-202, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA1, Length 979 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-202ENST00000398452 NCS1P62166 190 aa12.27□□□□□ -0.45
SKA1-202ENST00000398452 HGFACQ04756 655 aa12.27□□□□□ -0.45
SKA1-202ENST00000398452 CTF1Q16619 201 aa12.27□□□□□ -0.45
SKA1-202ENST00000398452 ZNF718Q3SXZ3 478 aa12.27□□□□□ -0.45
SKA1-202ENST00000398452 BEX5Q5H9J7 111 aa12.27□□□□□ -0.45
SKA1-202ENST00000398452 RGS7BPQ6MZT1 257 aaPredicted RBP12.27□□□□□ -0.45
SKA1-202ENST00000398452 SLC22A25Q6T423 547 aa12.27□□□□□ -0.45
SKA1-202ENST00000398452 SEZ6L2Q6UXD5 910 aa12.27□□□□□ -0.45
SKA1-202ENST00000398452 COLCA1Q6ZS62 124 aa12.27□□□□□ -0.45
SKA1-202ENST00000398452 SLC16A12Q6ZSM3 486 aa12.27□□□□□ -0.45
SKA1-202ENST00000398452 LURAP1LQ8IV03 231 aa12.27□□□□□ -0.45
SKA1-202ENST00000398452 SERPINA12Q8IW75 414 aa12.27□□□□□ -0.45
SKA1-202ENST00000398452 OR5D14Q8NGL3 314 aa12.27□□□□□ -0.45
SKA1-202ENST00000398452 LINC01560Q8TB33 94 aa12.27□□□□□ -0.45
SKA1-202ENST00000398452 DACH2Q96NX9 599 aa12.27□□□□□ -0.45
SKA1-202ENST00000398452 DERL3Q96Q80 235 aa12.27□□□□□ -0.45
SKA1-202ENST00000398452 CENPOQ9BU64 300 aa12.27□□□□□ -0.45
SKA1-202ENST00000398452 RBM38Q9H0Z9 239 aaKnown RBP12.27□□□□□ -0.45
SKA1-202ENST00000398452 DCSTAMPQ9H295 470 aa12.27□□□□□ -0.45
SKA1-202ENST00000398452 NOX4Q9NPH5 578 aa12.27□□□□□ -0.45
SKA1-202ENST00000398452 ZNF275Q9NSD4 429 aaPredicted RBP12.27□□□□□ -0.45
SKA1-202ENST00000398452 SNTG1Q9NSN8 517 aa12.27□□□□□ -0.45
SKA1-202ENST00000398452 NPAP1Q9NZP6 1156 aa12.27□□□□□ -0.45
SKA1-202ENST00000398452 STARD10Q9Y365 291 aa12.27□□□□□ -0.45
SKA1-202ENST00000398452 UNC79Q9P2D8 2635 aa12.27□□□□□ -0.45
SKA1-202ENST00000398452 DHRS7CA6NNS2 312 aa12.26□□□□□ -0.45
SKA1-202ENST00000398452 ICMTO60725 284 aa12.26□□□□□ -0.45
SKA1-202ENST00000398452 CDRT1O95170 752 aa12.26□□□□□ -0.45
SKA1-202ENST00000398452 CD3EP07766 207 aa12.26□□□□□ -0.45
SKA1-202ENST00000398452 UCHL1P09936 223 aa12.26□□□□□ -0.45
SKA1-202ENST00000398452 ZNF35P13682 527 aa12.26□□□□□ -0.45
SKA1-202ENST00000398452 THBS4P35443 961 aa12.26□□□□□ -0.45
SKA1-202ENST00000398452 DDOSTP39656 456 aa12.26□□□□□ -0.45
SKA1-202ENST00000398452 WNT5AP41221 380 aa12.26□□□□□ -0.45
SKA1-202ENST00000398452 RANBP1P43487 201 aa12.26□□□□□ -0.45
SKA1-202ENST00000398452 KIR2DL3P43628 341 aa12.26□□□□□ -0.45
SKA1-202ENST00000398452 PSMD7P51665 324 aa12.26□□□□□ -0.45
SKA1-202ENST00000398452 RPS11P62280 158 aaKnown RBP eCLIP12.26□□□□□ -0.45
SKA1-202ENST00000398452 ZNF92Q03936 586 aa12.26□□□□□ -0.45
SKA1-202ENST00000398452 SNTB2Q13425 540 aaKnown RBP12.26□□□□□ -0.45
SKA1-202ENST00000398452 UNQ9370/PRO34162Q6UXP9 181 aa12.26□□□□□ -0.45
SKA1-202ENST00000398452 TMEM91Q6ZNR0 172 aa12.26□□□□□ -0.45
SKA1-202ENST00000398452 RFPL4BQ6ZWI9 263 aa12.26□□□□□ -0.45
SKA1-202ENST00000398452 MYPOPQ86VE0 399 aaPredicted RBP12.26□□□□□ -0.45
SKA1-202ENST00000398452 TPRA1Q86W33 373 aa12.26□□□□□ -0.45
SKA1-202ENST00000398452 ZNF101Q8IZC7 436 aa12.26□□□□□ -0.45
SKA1-202ENST00000398452 PAQR4Q8N4S7 273 aaPredicted RBP12.26□□□□□ -0.45
SKA1-202ENST00000398452 CSNK2A3Q8NEV1 391 aa12.26□□□□□ -0.45
SKA1-202ENST00000398452 OR51A4Q8NGJ6 313 aa12.26□□□□□ -0.45
SKA1-202ENST00000398452 OR10AC1Q8NH08 325 aa12.26□□□□□ -0.45
SKA1-202ENST00000398452 PP6455Q8WZ26 134 aa12.26□□□□□ -0.45
SKA1-202ENST00000398452 RGP1Q92546 391 aaPredicted RBP12.26□□□□□ -0.45
SKA1-202ENST00000398452 FGGYQ96C11 551 aa12.26□□□□□ -0.45
SKA1-202ENST00000398452 ZNF319Q9P2F9 582 aa12.26□□□□□ -0.45
SKA1-202ENST00000398452 PIGLQ9Y2B2 252 aa12.26□□□□□ -0.45
SKA1-202ENST00000398452 ATP23Q9Y6H3 246 aa12.26□□□□□ -0.45
SKA1-202ENST00000398452 NBPF19A0A087WUL8 3843 aa12.26□□□□□ -0.45
SKA1-202ENST00000398452 A0A1B0GTI1 187 aa12.25□□□□□ -0.45
SKA1-202ENST00000398452 ANXA2P2A6NMY6 339 aa12.25□□□□□ -0.45
SKA1-202ENST00000398452 ANKRD30BLA7E2S9 258 aa12.25□□□□□ -0.45
SKA1-202ENST00000398452 ABCD4O14678 606 aa12.25□□□□□ -0.45
SKA1-202ENST00000398452 SC5DO75845 299 aa12.25□□□□□ -0.45
SKA1-202ENST00000398452 NGFP01138 241 aa12.25□□□□□ -0.45
SKA1-202ENST00000398452 ERCC1P07992 297 aaPredicted RBP12.25□□□□□ -0.45
SKA1-202ENST00000398452 EPXP11678 715 aa12.25□□□□□ -0.45
SKA1-202ENST00000398452 SRMP19623 302 aa12.25□□□□□ -0.45
SKA1-202ENST00000398452 RAB3AP20336 220 aa12.25□□□□□ -0.45
SKA1-202ENST00000398452 MTNR1BP49286 362 aa12.25□□□□□ -0.45
SKA1-202ENST00000398452 GSK3AP49840 483 aa12.25□□□□□ -0.45
SKA1-202ENST00000398452 MXD1Q05195 221 aa12.25□□□□□ -0.45
SKA1-202ENST00000398452 GK2Q14410 553 aaPredicted RBP12.25□□□□□ -0.45
SKA1-202ENST00000398452 INSL4Q14641 139 aa12.25□□□□□ -0.45
SKA1-202ENST00000398452 DGUOKQ16854 277 aa12.25□□□□□ -0.45
SKA1-202ENST00000398452 LCE2AQ5TA79 106 aaPredicted RBP12.25□□□□□ -0.45
SKA1-202ENST00000398452 ZBTB37Q5TC79 503 aa12.25□□□□□ -0.45
SKA1-202ENST00000398452 OR14K1Q8NGZ2 314 aa12.25□□□□□ -0.45
SKA1-202ENST00000398452 SLC25A40Q8TBP6 338 aa12.25□□□□□ -0.45
SKA1-202ENST00000398452 SPSB4Q96A44 273 aa12.25□□□□□ -0.45
SKA1-202ENST00000398452 CPNE2Q96FN4 548 aaPredicted RBP12.25□□□□□ -0.45
SKA1-202ENST00000398452 HIST1H2AAQ96QV6 131 aa12.25□□□□□ -0.45
SKA1-202ENST00000398452 OR2J1Q9GZK6 312 aa12.25□□□□□ -0.45
SKA1-202ENST00000398452 KCNN3Q9UGI6 736 aa12.25□□□□□ -0.45
SKA1-202ENST00000398452 FOXJ3Q9UPW0 622 aa12.25□□□□□ -0.45
SKA1-202ENST00000398452 V9GYS6 101 aa12.25□□□□□ -0.45
SKA1-202ENST00000398452 TRAV1-2A0A0B4J238 106 aa12.24□□□□□ -0.45
SKA1-202ENST00000398452 ZNF816-ZNF321PA0A0X1KG74 233 aa12.24□□□□□ -0.45
SKA1-202ENST00000398452 hCG_38984A0A1B0GV85 526 aa12.24□□□□□ -0.45
SKA1-202ENST00000398452 MEGF11A6BM72 1044 aa12.24□□□□□ -0.45
SKA1-202ENST00000398452 WIPF3A6NGB9 483 aa12.24□□□□□ -0.45
SKA1-202ENST00000398452 ATP6V1G2-DDX39BF2Z307 99 aa12.24□□□□□ -0.45
SKA1-202ENST00000398452 IL1AP01583 271 aa12.24□□□□□ -0.45
SKA1-202ENST00000398452 IGLV3-1P01715 115 aa12.24□□□□□ -0.45
SKA1-202ENST00000398452 THBDP07204 575 aa12.24□□□□□ -0.45
SKA1-202ENST00000398452 RAC2P15153 192 aa12.24□□□□□ -0.45
SKA1-202ENST00000398452 RAB3BP20337 219 aa12.24□□□□□ -0.45
SKA1-202ENST00000398452 CALCRP30988 508 aa12.24□□□□□ -0.45
SKA1-202ENST00000398452 GLRXP35754 106 aa12.24□□□□□ -0.45
SKA1-202ENST00000398452 FAM3AP98173 230 aa12.24□□□□□ -0.45
SKA1-202ENST00000398452 BSPH1Q075Z2 132 aa12.24□□□□□ -0.45
SKA1-202ENST00000398452 CNN3Q15417 329 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms