RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 SFTPCP11686 197 aa12.84□□□□□ -0.35
CXCL12-201ENST00000343575 CEACAM8P31997 349 aaPredicted RBP12.84□□□□□ -0.35
CXCL12-201ENST00000343575 GUCA1AP43080 201 aaPredicted RBP12.84□□□□□ -0.35
CXCL12-201ENST00000343575 RPS11P62280 158 aaKnown RBP eCLIP12.84□□□□□ -0.35
CXCL12-201ENST00000343575 MFGE8Q08431 387 aaPredicted RBP12.84□□□□□ -0.35
CXCL12-201ENST00000343575 GSG1Q2KHT4 349 aa12.84□□□□□ -0.35
CXCL12-201ENST00000343575 SLC36A2Q495M3 483 aa12.84□□□□□ -0.35
CXCL12-201ENST00000343575 NRN1LQ496H8 165 aa12.84□□□□□ -0.35
CXCL12-201ENST00000343575 FDX2Q6P4F2 183 aa12.84□□□□□ -0.35
CXCL12-201ENST00000343575 RPL22L1Q6P5R6 122 aaKnown RBP12.84□□□□□ -0.35
CXCL12-201ENST00000343575 DEGS2Q6QHC5 323 aa12.84□□□□□ -0.35
CXCL12-201ENST00000343575 RHOUQ7L0Q8 258 aa12.84□□□□□ -0.35
CXCL12-201ENST00000343575 KRT74Q7RTS7 529 aa12.84□□□□□ -0.35
CXCL12-201ENST00000343575 KRT77Q7Z794 578 aa12.84□□□□□ -0.35
CXCL12-201ENST00000343575 OR11H4Q8NGC9 324 aa12.84□□□□□ -0.35
CXCL12-201ENST00000343575 OR6K3Q8NGY3 331 aa12.84□□□□□ -0.35
CXCL12-201ENST00000343575 OR2AJ1Q8NGZ0 328 aa12.84□□□□□ -0.35
CXCL12-201ENST00000343575 GHSRQ92847 366 aa12.84□□□□□ -0.35
CXCL12-201ENST00000343575 SMIM19Q96E16 107 aa12.84□□□□□ -0.35
CXCL12-201ENST00000343575 MRPL48Q96GC5 212 aaKnown RBP12.84□□□□□ -0.35
CXCL12-201ENST00000343575 PDCD1LG2Q9BQ51 273 aa12.84□□□□□ -0.35
CXCL12-201ENST00000343575 CENPMQ9NSP4 180 aa12.84□□□□□ -0.35
CXCL12-201ENST00000343575 ABRACLQ9P1F3 81 aa12.84□□□□□ -0.35
CXCL12-201ENST00000343575 POLR1DQ9Y2S0 133 aa12.84□□□□□ -0.35
CXCL12-201ENST00000343575 EMC9Q9Y3B6 208 aa12.84□□□□□ -0.35
CXCL12-201ENST00000343575 TRAV6A0A075B6T7 132 aa12.83□□□□□ -0.36
CXCL12-201ENST00000343575 KRBOX1C9JBD0 128 aa12.83□□□□□ -0.36
CXCL12-201ENST00000343575 TRIM77I1YAP6 450 aa12.83□□□□□ -0.36
CXCL12-201ENST00000343575 SC5DO75845 299 aa12.83□□□□□ -0.36
CXCL12-201ENST00000343575 ZFPL1O95159 310 aa12.83□□□□□ -0.36
CXCL12-201ENST00000343575 EIF4EP06730 217 aaKnown RBP12.83□□□□□ -0.36
CXCL12-201ENST00000343575 MMP7P09237 267 aaPredicted RBP12.83□□□□□ -0.36
CXCL12-201ENST00000343575 TACSTD2P09758 323 aa12.83□□□□□ -0.36
CXCL12-201ENST00000343575 EDN3P14138 238 aa12.83□□□□□ -0.36
CXCL12-201ENST00000343575 ZNF250P15622 560 aa12.83□□□□□ -0.36
CXCL12-201ENST00000343575 THBS2P35442 1172 aa12.83□□□□□ -0.36
CXCL12-201ENST00000343575 KIR3DL2P43630 455 aa12.83□□□□□ -0.36
CXCL12-201ENST00000343575 DHODHQ02127 395 aa12.83□□□□□ -0.36
CXCL12-201ENST00000343575 SLC3A1Q07837 685 aa12.83□□□□□ -0.36
CXCL12-201ENST00000343575 PXDC1Q5TGL8 231 aa12.83□□□□□ -0.36
CXCL12-201ENST00000343575 SFXN4Q6P4A7 337 aa12.83□□□□□ -0.36
CXCL12-201ENST00000343575 ZNF813Q6ZN06 617 aa12.83□□□□□ -0.36
CXCL12-201ENST00000343575 OR2G2Q8NGZ5 317 aa12.83□□□□□ -0.36
CXCL12-201ENST00000343575 RGP1Q92546 391 aaPredicted RBP12.83□□□□□ -0.36
CXCL12-201ENST00000343575 ZC4H2Q9NQZ6 224 aa12.83□□□□□ -0.36
CXCL12-201ENST00000343575 A0A096LPE4 126 aa12.82□□□□□ -0.36
CXCL12-201ENST00000343575 A0A1W2PPZ6 126 aa12.82□□□□□ -0.36
CXCL12-201ENST00000343575 hCG_1807616A0A1W2PRN6 198 aa12.82□□□□□ -0.36
CXCL12-201ENST00000343575 NAP1L6A6NFF2 107 aa12.82□□□□□ -0.36
CXCL12-201ENST00000343575 OR4C45A6NMZ5 311 aa12.82□□□□□ -0.36
CXCL12-201ENST00000343575 PRRG2O14669 202 aa12.82□□□□□ -0.36
CXCL12-201ENST00000343575 SSNA1O43805 119 aa12.82□□□□□ -0.36
CXCL12-201ENST00000343575 LANCL1O43813 399 aa12.82□□□□□ -0.36
CXCL12-201ENST00000343575 ZNF254O75437 659 aa12.82□□□□□ -0.36
CXCL12-201ENST00000343575 HOXD4P09016 255 aaPredicted RBP12.82□□□□□ -0.36
CXCL12-201ENST00000343575 ZNF32P17041 273 aa12.82□□□□□ -0.36
CXCL12-201ENST00000343575 IGHV1-2P23083 117 aa12.82□□□□□ -0.36
CXCL12-201ENST00000343575 MPGP29372 298 aa12.82□□□□□ -0.36
CXCL12-201ENST00000343575 ALKBH1Q13686 389 aaKnown RBP12.82□□□□□ -0.36
CXCL12-201ENST00000343575 WDR38Q5JTN6 314 aa12.82□□□□□ -0.36
CXCL12-201ENST00000343575 FAM220AQ7Z4H9 259 aa12.82□□□□□ -0.36
CXCL12-201ENST00000343575 OR13C5Q8NGS8 318 aa12.82□□□□□ -0.36
CXCL12-201ENST00000343575 CNTNAP3BQ96NU0 1288 aa12.82□□□□□ -0.36
CXCL12-201ENST00000343575 CNTNAP3Q9BZ76 1288 aa12.82□□□□□ -0.36
CXCL12-201ENST00000343575 ZNF436Q9C0F3 470 aaPredicted RBP12.82□□□□□ -0.36
CXCL12-201ENST00000343575 RDH8Q9NYR8 311 aa12.82□□□□□ -0.36
CXCL12-201ENST00000343575 SLC5A6Q9Y289 635 aa12.82□□□□□ -0.36
CXCL12-201ENST00000343575 COL6A6A6NMZ7 2263 aa12.82□□□□□ -0.36
CXCL12-201ENST00000343575 TRAV1-2A0A0B4J238 106 aa12.82□□□□□ -0.36
CXCL12-201ENST00000343575 TRBV2A0A0J9YWF9 115 aa12.82□□□□□ -0.36
CXCL12-201ENST00000343575 HSPB2A8KAH6 182 aa12.82□□□□□ -0.36
CXCL12-201ENST00000343575 ZNF878C9JN71 531 aa12.82□□□□□ -0.36
CXCL12-201ENST00000343575 SERPINA3P01011 423 aa12.82□□□□□ -0.36
CXCL12-201ENST00000343575 CD1AP06126 327 aa12.82□□□□□ -0.36
CXCL12-201ENST00000343575 CRHP06850 196 aa12.82□□□□□ -0.36
CXCL12-201ENST00000343575 TMIGD3P0DMS9 266 aaPredicted RBP12.82□□□□□ -0.36
CXCL12-201ENST00000343575 ATF4P18848 351 aaPredicted RBP12.82□□□□□ -0.36
CXCL12-201ENST00000343575 GDI2P50395 445 aaKnown RBP12.82□□□□□ -0.36
CXCL12-201ENST00000343575 RIDAP52758 137 aaKnown RBP12.82□□□□□ -0.36
CXCL12-201ENST00000343575 HSPB2Q16082 182 aa12.82□□□□□ -0.36
CXCL12-201ENST00000343575 Q6ZT83 130 aa12.82□□□□□ -0.36
CXCL12-201ENST00000343575 MS4A15Q8N5U1 240 aa12.82□□□□□ -0.36
CXCL12-201ENST00000343575 GJC3Q8NFK1 279 aa12.82□□□□□ -0.36
CXCL12-201ENST00000343575 TRMT10AQ8TBZ6 339 aaKnown RBP12.82□□□□□ -0.36
CXCL12-201ENST00000343575 YIPF5Q969M3 257 aa12.82□□□□□ -0.36
CXCL12-201ENST00000343575 C4orf45Q96LM5 186 aa12.82□□□□□ -0.36
CXCL12-201ENST00000343575 G6PC2Q9NQR9 355 aa12.82□□□□□ -0.36
CXCL12-201ENST00000343575 FAM206AQ9NX38 181 aa12.82□□□□□ -0.36
CXCL12-201ENST00000343575 SLC22A13Q9Y226 551 aa12.82□□□□□ -0.36
CXCL12-201ENST00000343575 CACNA1BQ00975 2339 aa12.82□□□□□ -0.36
CXCL12-201ENST00000343575 PEX14O75381 377 aa12.81□□□□□ -0.36
CXCL12-201ENST00000343575 TPPPO94811 219 aa12.81□□□□□ -0.36
CXCL12-201ENST00000343575 MPC2O95563 127 aa12.81□□□□□ -0.36
CXCL12-201ENST00000343575 H2BFMP0C1H6 154 aa12.81□□□□□ -0.36
CXCL12-201ENST00000343575 DCTDP32321 178 aa12.81□□□□□ -0.36
CXCL12-201ENST00000343575 AP3S2P59780 193 aa12.81□□□□□ -0.36
CXCL12-201ENST00000343575 PSG4Q00888 419 aa12.81□□□□□ -0.36
CXCL12-201ENST00000343575 METTL11BQ5VVY1 283 aa12.81□□□□□ -0.36
CXCL12-201ENST00000343575 SLC16A14Q7RTX9 510 aa12.81□□□□□ -0.36
CXCL12-201ENST00000343575 CATSPERDQ86XM0 798 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms