RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 ARRDC5A6NEK1 342 aa15.55■□□□□ 0.08
SHANK1-201ENST00000293441 IFITM5A6NNB3 132 aa15.55■□□□□ 0.08
SHANK1-201ENST00000293441 CDC14BO60729 498 aa15.55■□□□□ 0.08
SHANK1-201ENST00000293441 TGFBR1P36897 503 aa15.55■□□□□ 0.08
SHANK1-201ENST00000293441 RIMKLAQ8IXN7 391 aa15.55■□□□□ 0.08
SHANK1-201ENST00000293441 LINC01555Q8NAE3 123 aa15.55■□□□□ 0.08
SHANK1-201ENST00000293441 SERTM2A0A1B0GWG4 89 aa15.54■□□□□ 0.08
SHANK1-201ENST00000293441 K7EQS6 105 aa15.54■□□□□ 0.08
SHANK1-201ENST00000293441 XRCC3O43542 346 aa15.54■□□□□ 0.08
SHANK1-201ENST00000293441 KDF1Q8NAX2 398 aaPredicted RBP15.54■□□□□ 0.08
SHANK1-201ENST00000293441 ARAP2Q8WZ64 1704 aa15.54■□□□□ 0.08
SHANK1-201ENST00000293441 GPANK1O95872 356 aa15.54■□□□□ 0.08
SHANK1-201ENST00000293441 GNG10P50151 68 aa15.54■□□□□ 0.08
SHANK1-201ENST00000293441 UBE2MP61081 183 aaKnown RBP15.54■□□□□ 0.08
SHANK1-201ENST00000293441 TMEM41BQ5BJD5 291 aa15.54■□□□□ 0.08
SHANK1-201ENST00000293441 RREB1Q92766 1687 aa15.54■□□□□ 0.08
SHANK1-201ENST00000293441 TNFSF14O43557 240 aa15.54■□□□□ 0.08
SHANK1-201ENST00000293441 CT45A10P0DMU9 189 aa15.54■□□□□ 0.08
SHANK1-201ENST00000293441 C17orf78Q8N4C9 275 aa15.54■□□□□ 0.08
SHANK1-201ENST00000293441 OR10V1Q8NGI7 309 aa15.54■□□□□ 0.08
SHANK1-201ENST00000293441 LRP3O75074 770 aa15.54■□□□□ 0.08
SHANK1-201ENST00000293441 CTRB1P17538 263 aa15.54■□□□□ 0.08
SHANK1-201ENST00000293441 TNFRSF1AP19438 455 aa15.54■□□□□ 0.08
SHANK1-201ENST00000293441 PIGPP57054 158 aa15.54■□□□□ 0.08
SHANK1-201ENST00000293441 CTRB2Q6GPI1 263 aa15.54■□□□□ 0.08
SHANK1-201ENST00000293441 PWWP2BQ6NUJ5 590 aa15.54■□□□□ 0.08
SHANK1-201ENST00000293441 ARHGDIGQ99819 225 aa15.54■□□□□ 0.08
SHANK1-201ENST00000293441 AQP7P3A6NL99 342 aa15.54■□□□□ 0.08
SHANK1-201ENST00000293441 CT55Q8WUE5 264 aa15.54■□□□□ 0.08
SHANK1-201ENST00000293441 ANGPTL7O43827 346 aa15.53■□□□□ 0.08
SHANK1-201ENST00000293441 SNRPNP63162 240 aaKnown RBP15.53■□□□□ 0.08
SHANK1-201ENST00000293441 APH1BQ8WW43 257 aa15.53■□□□□ 0.08
SHANK1-201ENST00000293441 USP54Q70EL1 1684 aa15.53■□□□□ 0.08
SHANK1-201ENST00000293441 H2AFB1P0C5Y9 115 aa15.53■□□□□ 0.08
SHANK1-201ENST00000293441 BOLA1Q9Y3E2 137 aa15.53■□□□□ 0.08
SHANK1-201ENST00000293441 THBS4P35443 961 aa15.53■□□□□ 0.08
SHANK1-201ENST00000293441 PRICKLE4Q2TBC4 344 aa15.53■□□□□ 0.08
SHANK1-201ENST00000293441 MARCH1Q8TCQ1 289 aa15.53■□□□□ 0.08
SHANK1-201ENST00000293441 C20orf202A1L168 122 aa15.53■□□□□ 0.08
SHANK1-201ENST00000293441 ZNF724A8MTY0 619 aa15.53■□□□□ 0.08
SHANK1-201ENST00000293441 TSTD3H0UI37 97 aa15.53■□□□□ 0.08
SHANK1-201ENST00000293441 OR5H8P0DN80 308 aa15.53■□□□□ 0.08
SHANK1-201ENST00000293441 MFSD4AQ8N468 514 aa15.53■□□□□ 0.08
SHANK1-201ENST00000293441 ZFP62Q8NB50 900 aaPredicted RBP15.53■□□□□ 0.08
SHANK1-201ENST00000293441 OR5H6Q8NGV6 325 aa15.53■□□□□ 0.08
SHANK1-201ENST00000293441 PSENENQ9NZ42 101 aa15.53■□□□□ 0.08
SHANK1-201ENST00000293441 SPINK14Q6IE38 97 aa15.53■□□□□ 0.08
SHANK1-201ENST00000293441 DDOQ99489 341 aa15.53■□□□□ 0.08
SHANK1-201ENST00000293441 STRAPQ9Y3F4 350 aaKnown RBP15.53■□□□□ 0.08
SHANK1-201ENST00000293441 URGCP-MRPS24S4R325 110 aa15.53■□□□□ 0.08
SHANK1-201ENST00000293441 OR7C2O60412 319 aa15.53■□□□□ 0.08
SHANK1-201ENST00000293441 LYZL6O75951 148 aa15.53■□□□□ 0.08
SHANK1-201ENST00000293441 PDCD1Q15116 288 aa15.53■□□□□ 0.08
SHANK1-201ENST00000293441 ADPRHL1Q8NDY3 354 aa15.53■□□□□ 0.08
SHANK1-201ENST00000293441 PPIL1Q9Y3C6 166 aa15.53■□□□□ 0.08
SHANK1-201ENST00000293441 MTCH2Q9Y6C9 303 aa15.53■□□□□ 0.08
SHANK1-201ENST00000293441 GAB2Q9UQC2 676 aa15.52■□□□□ 0.08
SHANK1-201ENST00000293441 M0QZ24 198 aa15.52■□□□□ 0.08
SHANK1-201ENST00000293441 CD3DP04234 171 aa15.52■□□□□ 0.08
SHANK1-201ENST00000293441 POU2F2P09086 479 aa15.52■□□□□ 0.08
SHANK1-201ENST00000293441 DRD3P35462 400 aa15.52■□□□□ 0.08
SHANK1-201ENST00000293441 FMODQ06828 376 aa15.52■□□□□ 0.08
SHANK1-201ENST00000293441 C17orf107Q6ZR85 190 aa15.52■□□□□ 0.08
SHANK1-201ENST00000293441 SMIM18P0DKX4 95 aa15.52■□□□□ 0.07
SHANK1-201ENST00000293441 TAS2R45P59539 299 aa15.52■□□□□ 0.07
SHANK1-201ENST00000293441 EDARADDQ8WWZ3 215 aa15.52■□□□□ 0.07
SHANK1-201ENST00000293441 ERGIC1Q969X5 290 aa15.52■□□□□ 0.07
SHANK1-201ENST00000293441 SIAEQ9HAT2 523 aa15.52■□□□□ 0.07
SHANK1-201ENST00000293441 FLVCR2Q9UPI3 526 aa15.52■□□□□ 0.07
SHANK1-201ENST00000293441 HOXB3P14651 431 aaPredicted RBP15.52■□□□□ 0.07
SHANK1-201ENST00000293441 HAGHQ16775 308 aa15.52■□□□□ 0.07
SHANK1-201ENST00000293441 OR2T2Q6IF00 324 aa15.52■□□□□ 0.07
SHANK1-201ENST00000293441 OR10D3Q8NH80 312 aa15.52■□□□□ 0.07
SHANK1-201ENST00000293441 TVP23CQ96ET8 276 aa15.52■□□□□ 0.07
SHANK1-201ENST00000293441 PELI1Q96FA3 418 aa15.52■□□□□ 0.07
SHANK1-201ENST00000293441 ESRP2Q9H6T0 727 aaKnown RBP15.52■□□□□ 0.07
SHANK1-201ENST00000293441 BCORQ6W2J9 1755 aa15.52■□□□□ 0.07
SHANK1-201ENST00000293441 SLC25A6P12236 298 aa15.52■□□□□ 0.07
SHANK1-201ENST00000293441 BTG1P62324 171 aa15.52■□□□□ 0.07
SHANK1-201ENST00000293441 PRDX4Q13162 271 aa15.52■□□□□ 0.07
SHANK1-201ENST00000293441 LCN15Q6UWW0 184 aa15.52■□□□□ 0.07
SHANK1-201ENST00000293441 PLA1AQ53H76 456 aa15.51■□□□□ 0.07
SHANK1-201ENST00000293441 GPX8Q8TED1 209 aa15.51■□□□□ 0.07
SHANK1-201ENST00000293441 MARC2Q969Z3 335 aa15.51■□□□□ 0.07
SHANK1-201ENST00000293441 MAGT1Q9H0U3 335 aa15.51■□□□□ 0.07
SHANK1-201ENST00000293441 OCIAD1Q9NX40 245 aa15.51■□□□□ 0.07
SHANK1-201ENST00000293441 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.51■□□□□ 0.07
SHANK1-201ENST00000293441 H3BMH7 237 aa15.51■□□□□ 0.07
SHANK1-201ENST00000293441 PCBP3P57721 371 aaKnown RBP15.51■□□□□ 0.07
SHANK1-201ENST00000293441 FAHD1Q6P587 224 aa15.51■□□□□ 0.07
SHANK1-201ENST00000293441 GALNT16Q8N428 558 aa15.51■□□□□ 0.07
SHANK1-201ENST00000293441 SH2D7A6NKC9 451 aaPredicted RBP15.51■□□□□ 0.07
SHANK1-201ENST00000293441 CA6P23280 308 aa15.51■□□□□ 0.07
SHANK1-201ENST00000293441 CCL17Q92583 94 aa15.51■□□□□ 0.07
SHANK1-201ENST00000293441 GABRG3Q99928 467 aa15.51■□□□□ 0.07
SHANK1-201ENST00000293441 ZNF251Q9BRH9 671 aa15.51■□□□□ 0.07
SHANK1-201ENST00000293441 NDFIP1Q9BT67 221 aa15.51■□□□□ 0.07
SHANK1-201ENST00000293441 STUMQ69YW2 141 aa15.51■□□□□ 0.07
SHANK1-201ENST00000293441 DRAM2Q6UX65 266 aa15.51■□□□□ 0.07
SHANK1-201ENST00000293441 OR4C3Q8NH37 302 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 741.5 ms