RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 SLC25A4P12235 298 aa11.94□□□□□ -0.5
COL1A1-201ENST00000225964 DGCR2P98153 550 aa11.94□□□□□ -0.5
COL1A1-201ENST00000225964 MICBQ29980 383 aa11.94□□□□□ -0.5
COL1A1-201ENST00000225964 NPEPL1Q8NDH3 523 aa11.94□□□□□ -0.5
COL1A1-201ENST00000225964 SCARB1Q8WTV0 552 aa11.94□□□□□ -0.5
COL1A1-201ENST00000225964 CLDN23Q96B33 292 aa11.94□□□□□ -0.5
COL1A1-201ENST00000225964 DEFB108AA8MXU0 73 aa11.93□□□□□ -0.5
COL1A1-201ENST00000225964 PPP5D1E7EU14 171 aa11.93□□□□□ -0.5
COL1A1-201ENST00000225964 B3GALNT1O75752 331 aa11.93□□□□□ -0.5
COL1A1-201ENST00000225964 MBP02144 154 aa11.93□□□□□ -0.5
COL1A1-201ENST00000225964 FAHP16930 419 aa11.93□□□□□ -0.5
COL1A1-201ENST00000225964 DLEU7Q6UYE1 221 aa11.93□□□□□ -0.5
COL1A1-201ENST00000225964 ADPRHL1Q8NDY3 354 aa11.93□□□□□ -0.5
COL1A1-201ENST00000225964 GNPNAT1Q96EK6 184 aaPredicted RBP11.93□□□□□ -0.5
COL1A1-201ENST00000225964 OR2F2O95006 317 aa11.93□□□□□ -0.5
COL1A1-201ENST00000225964 AGERQ15109 404 aa11.93□□□□□ -0.5
COL1A1-201ENST00000225964 PAQR6Q6TCH4 344 aa11.93□□□□□ -0.5
COL1A1-201ENST00000225964 FUNDC1Q8IVP5 155 aa11.93□□□□□ -0.5
COL1A1-201ENST00000225964 SLC38A6Q8IZM9 456 aa11.93□□□□□ -0.5
COL1A1-201ENST00000225964 OR1F12Q8NHA8 337 aa11.93□□□□□ -0.5
COL1A1-201ENST00000225964 P4HTMQ9NXG6 502 aa11.93□□□□□ -0.5
COL1A1-201ENST00000225964 CDX4O14627 284 aaPredicted RBP11.93□□□□□ -0.5
COL1A1-201ENST00000225964 ZNF239Q16600 458 aaKnown RBP11.93□□□□□ -0.5
COL1A1-201ENST00000225964 PXDC1Q5TGL8 231 aa11.93□□□□□ -0.5
COL1A1-201ENST00000225964 OR13D1Q8NGV5 346 aa11.93□□□□□ -0.5
COL1A1-201ENST00000225964 OR51I2Q9H344 312 aa11.93□□□□□ -0.5
COL1A1-201ENST00000225964 CDK5RAP2Q96SN8 1893 aa11.93□□□□□ -0.5
COL1A1-201ENST00000225964 SPTY2D1-AS1A0A0U1RR47 76 aa11.93□□□□□ -0.5
COL1A1-201ENST00000225964 ALG1L2C9J202 215 aa11.93□□□□□ -0.5
COL1A1-201ENST00000225964 M0R1X1 148 aa11.93□□□□□ -0.5
COL1A1-201ENST00000225964 TAAR5O14804 337 aa11.93□□□□□ -0.5
COL1A1-201ENST00000225964 ZBTB25P24278 435 aa11.93□□□□□ -0.5
COL1A1-201ENST00000225964 ARNTP27540 789 aa11.93□□□□□ -0.5
COL1A1-201ENST00000225964 PTTG1IPP53801 180 aa11.93□□□□□ -0.5
COL1A1-201ENST00000225964 RHOBP62745 196 aa11.93□□□□□ -0.5
COL1A1-201ENST00000225964 PMP22Q01453 160 aa11.93□□□□□ -0.5
COL1A1-201ENST00000225964 RNPS1Q15287 305 aaKnown RBP11.93□□□□□ -0.5
COL1A1-201ENST00000225964 XKR7Q5GH72 579 aa11.93□□□□□ -0.5
COL1A1-201ENST00000225964 H3F3CQ6NXT2 135 aa11.93□□□□□ -0.5
COL1A1-201ENST00000225964 A0A1B0GVG6 124 aa11.93□□□□□ -0.5
COL1A1-201ENST00000225964 LILRA5A6NI73 299 aa11.93□□□□□ -0.5
COL1A1-201ENST00000225964 OPRK1P41145 380 aa11.93□□□□□ -0.5
COL1A1-201ENST00000225964 SLC6A12P48065 614 aa11.93□□□□□ -0.5
COL1A1-201ENST00000225964 ACSM6Q6P461 480 aa11.93□□□□□ -0.5
COL1A1-201ENST00000225964 TMEM174Q8WUU8 243 aa11.93□□□□□ -0.5
COL1A1-201ENST00000225964 SIGLEC11Q96RL6 698 aa11.93□□□□□ -0.5
COL1A1-201ENST00000225964 TMEM208Q9BTX3 173 aa11.93□□□□□ -0.5
COL1A1-201ENST00000225964 TAAR3PQ9P1P4 343 aa11.93□□□□□ -0.5
COL1A1-201ENST00000225964 TMEM129A0AVI4 362 aa11.93□□□□□ -0.5
COL1A1-201ENST00000225964 ITGBL1O95965 494 aaPredicted RBP11.93□□□□□ -0.5
COL1A1-201ENST00000225964 HES3Q5TGS1 186 aa11.93□□□□□ -0.5
COL1A1-201ENST00000225964 Q6ZNB5 142 aa11.93□□□□□ -0.5
COL1A1-201ENST00000225964 OR13F1Q8NGS4 319 aa11.93□□□□□ -0.5
COL1A1-201ENST00000225964 OR4C3Q8NH37 302 aa11.93□□□□□ -0.5
COL1A1-201ENST00000225964 RBPMSQ93062 196 aaKnown RBP11.93□□□□□ -0.5
COL1A1-201ENST00000225964 MYEOVQ96EZ4 313 aa11.93□□□□□ -0.5
COL1A1-201ENST00000225964 FBXO8Q9NRD0 319 aa11.93□□□□□ -0.5
COL1A1-201ENST00000225964 ECM29Q5VYK3 1845 aa11.92□□□□□ -0.5
COL1A1-201ENST00000225964 CLEC18AA5D8T8 446 aa11.92□□□□□ -0.5
COL1A1-201ENST00000225964 UMAD1C9J7I0 102 aa11.92□□□□□ -0.5
COL1A1-201ENST00000225964 CD276Q5ZPR3 534 aa11.92□□□□□ -0.5
COL1A1-201ENST00000225964 CLEC18CQ8NCF0 446 aa11.92□□□□□ -0.5
COL1A1-201ENST00000225964 SLC35B4Q969S0 331 aa11.92□□□□□ -0.5
COL1A1-201ENST00000225964 CTDSP1Q9GZU7 261 aa11.92□□□□□ -0.5
COL1A1-201ENST00000225964 FBXO34Q9NWN3 711 aa11.92□□□□□ -0.5
COL1A1-201ENST00000225964 AMTP48728 403 aa11.92□□□□□ -0.5
COL1A1-201ENST00000225964 SUMO3P55854 103 aaPredicted RBP11.92□□□□□ -0.5
COL1A1-201ENST00000225964 RPUSD3Q6P087 351 aaKnown RBP11.92□□□□□ -0.5
COL1A1-201ENST00000225964 RBM14Q96PK6 669 aaKnown RBP11.92□□□□□ -0.5
COL1A1-201ENST00000225964 OR8B4Q96RC9 309 aa11.92□□□□□ -0.5
COL1A1-201ENST00000225964 RAB1BQ9H0U4 201 aa11.92□□□□□ -0.5
COL1A1-201ENST00000225964 EVPLQ92817 2033 aa11.92□□□□□ -0.5
COL1A1-201ENST00000225964 ZNF727A8MUV8 499 aa11.92□□□□□ -0.5
COL1A1-201ENST00000225964 ADAM10O14672 748 aa11.92□□□□□ -0.5
COL1A1-201ENST00000225964 COX5AP20674 150 aa11.92□□□□□ -0.5
COL1A1-201ENST00000225964 OR3A4PP47883 348 aa11.92□□□□□ -0.5
COL1A1-201ENST00000225964 AQP6Q13520 282 aa11.92□□□□□ -0.5
COL1A1-201ENST00000225964 TRA2AQ13595 282 aaKnown RBP eCLIP11.92□□□□□ -0.5
COL1A1-201ENST00000225964 SIGLECL1Q8N7X8 197 aa11.92□□□□□ -0.5
COL1A1-201ENST00000225964 NHLRC2Q8NBF2 726 aa11.92□□□□□ -0.5
COL1A1-201ENST00000225964 ISG20L2Q9H9L3 353 aaKnown RBP11.92□□□□□ -0.5
COL1A1-201ENST00000225964 LAMP3Q9UQV4 416 aa11.92□□□□□ -0.5
COL1A1-201ENST00000225964 ONECUT2O95948 504 aa11.92□□□□□ -0.5
COL1A1-201ENST00000225964 MGMTP16455 207 aa11.92□□□□□ -0.5
COL1A1-201ENST00000225964 UBE2MP61081 183 aaKnown RBP11.92□□□□□ -0.5
COL1A1-201ENST00000225964 GALNT16Q8N428 558 aa11.92□□□□□ -0.5
COL1A1-201ENST00000225964 MARCH1Q8TCQ1 289 aa11.92□□□□□ -0.5
COL1A1-201ENST00000225964 TTC9Q92623 222 aa11.92□□□□□ -0.5
COL1A1-201ENST00000225964 AMMECR1Q9Y4X0 333 aaPredicted RBP11.92□□□□□ -0.5
COL1A1-201ENST00000225964 E5RGE8 158 aa11.92□□□□□ -0.5
COL1A1-201ENST00000225964 G3V3Q6 166 aa11.92□□□□□ -0.5
COL1A1-201ENST00000225964 CYR61O00622 381 aa11.92□□□□□ -0.5
COL1A1-201ENST00000225964 SCO1O75880 301 aa11.92□□□□□ -0.5
COL1A1-201ENST00000225964 JTBO76095 146 aa11.92□□□□□ -0.5
COL1A1-201ENST00000225964 ABCD3P28288 659 aa11.92□□□□□ -0.5
COL1A1-201ENST00000225964 THBS4P35443 961 aa11.92□□□□□ -0.5
COL1A1-201ENST00000225964 TNFAIP6P98066 277 aaPredicted RBP11.92□□□□□ -0.5
COL1A1-201ENST00000225964 MRPL58Q14197 206 aaKnown RBP11.92□□□□□ -0.5
COL1A1-201ENST00000225964 PDCD1Q15116 288 aa11.92□□□□□ -0.5
COL1A1-201ENST00000225964 STAC2Q6ZMT1 411 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms