RNA–Protein interactions for RNA: ENST00000638573.1

COLCA2-206, Transcript of colorectal cancer associated 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COLCA2, Length 1,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-206ENST00000638573 NIPAL2Q9H841 368 aa13.92□□□□□ -0.18
COLCA2-206ENST00000638573 CYSLTR2Q9NS75 346 aa13.92□□□□□ -0.18
COLCA2-206ENST00000638573 N6AMT1Q9Y5N5 214 aa13.92□□□□□ -0.18
COLCA2-206ENST00000638573 MXRA5Q9NR99 2828 aa13.92□□□□□ -0.18
COLCA2-206ENST00000638573 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.92□□□□□ -0.186e-8■■□□□ 12.2
COLCA2-206ENST00000638573 STAB1Q9NY15 2570 aa13.91□□□□□ -0.18
COLCA2-206ENST00000638573 IGHV1-69-2A0A0G2JMI3 117 aa13.91□□□□□ -0.18
COLCA2-206ENST00000638573 DLGAP1O14490 977 aa13.91□□□□□ -0.18
COLCA2-206ENST00000638573 TPD52L2O43399 206 aaKnown RBP13.91□□□□□ -0.18
COLCA2-206ENST00000638573 ENTPD6O75354 484 aa13.91□□□□□ -0.18
COLCA2-206ENST00000638573 RGS9O75916 674 aaPredicted RBP13.91□□□□□ -0.18
COLCA2-206ENST00000638573 RAC2P15153 192 aa13.91□□□□□ -0.18
COLCA2-206ENST00000638573 SELEP16581 610 aa13.91□□□□□ -0.18
COLCA2-206ENST00000638573 MTNR1AP48039 350 aa13.91□□□□□ -0.18
COLCA2-206ENST00000638573 HCCSP53701 268 aa13.91□□□□□ -0.18
COLCA2-206ENST00000638573 PRSS12P56730 875 aa13.91□□□□□ -0.18
COLCA2-206ENST00000638573 LRRN1Q6UXK5 716 aa13.91□□□□□ -0.18
COLCA2-206ENST00000638573 FBXW12Q6X9E4 464 aa13.91□□□□□ -0.18
COLCA2-206ENST00000638573 COLCA1Q6ZS62 124 aa13.91□□□□□ -0.18
COLCA2-206ENST00000638573 MRPL21Q7Z2W9 205 aaKnown RBP13.91□□□□□ -0.18
COLCA2-206ENST00000638573 OR10H4Q8NGA5 316 aa13.91□□□□□ -0.18
COLCA2-206ENST00000638573 CMBLQ96DG6 245 aa13.91□□□□□ -0.18
COLCA2-206ENST00000638573 ADI1Q9BV57 179 aa13.91□□□□□ -0.18
COLCA2-206ENST00000638573 HIF1ANQ9NWT6 349 aa13.91□□□□□ -0.18
COLCA2-206ENST00000638573 IKZF2Q9UKS7 526 aa13.91□□□□□ -0.18
COLCA2-206ENST00000638573 KLHDC2Q9Y2U9 406 aa13.91□□□□□ -0.18
COLCA2-206ENST00000638573 TBX1O43435 398 aa13.9□□□□□ -0.18
COLCA2-206ENST00000638573 ZNF254O75437 659 aa13.9□□□□□ -0.18
COLCA2-206ENST00000638573 AVPP01185 164 aa13.9□□□□□ -0.18
COLCA2-206ENST00000638573 OR2T7P0C7T2 308 aa13.9□□□□□ -0.18
COLCA2-206ENST00000638573 SLC2A1P11166 492 aa13.9□□□□□ -0.18
COLCA2-206ENST00000638573 CXCR4P61073 352 aa13.9□□□□□ -0.18
COLCA2-206ENST00000638573 PSG7Q13046 419 aa13.9□□□□□ -0.18
COLCA2-206ENST00000638573 IL18R1Q13478 541 aa13.9□□□□□ -0.18
COLCA2-206ENST00000638573 ZNF691Q5VV52 312 aa13.9□□□□□ -0.18
COLCA2-206ENST00000638573 DEGS2Q6QHC5 323 aa13.9□□□□□ -0.18
COLCA2-206ENST00000638573 ZNF322Q6U7Q0 402 aaPredicted RBP13.9□□□□□ -0.18
COLCA2-206ENST00000638573 Q6ZR03 302 aa13.9□□□□□ -0.18
COLCA2-206ENST00000638573 C1orf229Q6ZS94 237 aaPredicted RBP13.9□□□□□ -0.18
COLCA2-206ENST00000638573 NAA40Q86UY6 237 aa13.9□□□□□ -0.18
COLCA2-206ENST00000638573 OR52H1Q8NGJ2 320 aa13.9□□□□□ -0.18
COLCA2-206ENST00000638573 OR2T27Q8NH04 317 aa13.9□□□□□ -0.18
COLCA2-206ENST00000638573 RHOXF1Q8NHV9 184 aa13.9□□□□□ -0.18
COLCA2-206ENST00000638573 TMEM158Q8WZ71 300 aa13.9□□□□□ -0.18
COLCA2-206ENST00000638573 RNFT2Q96EX2 444 aa13.9□□□□□ -0.18
COLCA2-206ENST00000638573 TTTY10Q9BZA0 68 aa13.9□□□□□ -0.18
COLCA2-206ENST00000638573 OPA3Q9H6K4 179 aa13.9□□□□□ -0.18
COLCA2-206ENST00000638573 SAP30LQ9HAJ7 183 aa13.9□□□□□ -0.18
COLCA2-206ENST00000638573 PURGQ9UJV8 347 aaKnown RBP13.9□□□□□ -0.18
COLCA2-206ENST00000638573 COPS3Q9UNS2 423 aa13.9□□□□□ -0.18
COLCA2-206ENST00000638573 WIPI2Q9Y4P8 454 aa13.9□□□□□ -0.18
COLCA2-206ENST00000638573 LRP12Q9Y561 859 aa13.9□□□□□ -0.18
COLCA2-206ENST00000638573 H0YAE9 185 aa13.89□□□□□ -0.19
COLCA2-206ENST00000638573 PSMD9O00233 223 aa13.89□□□□□ -0.19
COLCA2-206ENST00000638573 XRCC2O43543 280 aa13.89□□□□□ -0.19
COLCA2-206ENST00000638573 APOL3O95236 402 aa13.89□□□□□ -0.19
COLCA2-206ENST00000638573 GABRB1P18505 474 aa13.89□□□□□ -0.19
COLCA2-206ENST00000638573 KITLGP21583 273 aa13.89□□□□□ -0.19
COLCA2-206ENST00000638573 SRP14P37108 136 aaKnown RBP13.89□□□□□ -0.19
COLCA2-206ENST00000638573 CAPGP40121 348 aa13.89□□□□□ -0.19
COLCA2-206ENST00000638573 CRYBB2P43320 205 aa13.89□□□□□ -0.19
COLCA2-206ENST00000638573 RIDAP52758 137 aaKnown RBP13.89□□□□□ -0.19
COLCA2-206ENST00000638573 DVL1P1P54792 670 aaPredicted RBP13.89□□□□□ -0.19
COLCA2-206ENST00000638573 TMEM33P57088 247 aa13.89□□□□□ -0.19
COLCA2-206ENST00000638573 ZNF121P58317 390 aaPredicted RBP13.89□□□□□ -0.19
COLCA2-206ENST00000638573 PSMA6P60900 246 aaKnown RBP13.89□□□□□ -0.19
COLCA2-206ENST00000638573 ACTC1P68032 377 aa13.89□□□□□ -0.19
COLCA2-206ENST00000638573 ACTA1P68133 377 aa13.89□□□□□ -0.19
COLCA2-206ENST00000638573 EGR3Q06889 387 aa13.89□□□□□ -0.19
COLCA2-206ENST00000638573 HLXQ14774 488 aaPredicted RBP13.89□□□□□ -0.19
COLCA2-206ENST00000638573 TIGD6Q17RP2 521 aa13.89□□□□□ -0.19
COLCA2-206ENST00000638573 ZNF829Q3KNS6 432 aaPredicted RBP13.89□□□□□ -0.19
COLCA2-206ENST00000638573 PCGF3Q3KNV8 242 aa13.89□□□□□ -0.19
COLCA2-206ENST00000638573 SNAI3Q3KNW1 292 aa13.89□□□□□ -0.19
COLCA2-206ENST00000638573 FAM57BQ71RH2 274 aa13.89□□□□□ -0.19
COLCA2-206ENST00000638573 PGAP1Q75T13 922 aa13.89□□□□□ -0.19
COLCA2-206ENST00000638573 ZNF679Q8IYX0 411 aa13.89□□□□□ -0.19
COLCA2-206ENST00000638573 CCL17Q92583 94 aa13.89□□□□□ -0.19
COLCA2-206ENST00000638573 HAVCR1Q96D42 359 aa13.89□□□□□ -0.19
COLCA2-206ENST00000638573 PGAM5Q96HS1 289 aa13.89□□□□□ -0.19
COLCA2-206ENST00000638573 OR8B4Q96RC9 309 aa13.89□□□□□ -0.19
COLCA2-206ENST00000638573 TBX5Q99593 518 aa13.89□□□□□ -0.19
COLCA2-206ENST00000638573 C19orf24Q9BVV8 132 aa13.89□□□□□ -0.19
COLCA2-206ENST00000638573 OR10A2Q9H208 303 aa13.89□□□□□ -0.19
COLCA2-206ENST00000638573 BRD7Q9NPI1 651 aa13.89□□□□□ -0.19
COLCA2-206ENST00000638573 DECR2Q9NUI1 292 aa13.89□□□□□ -0.19
COLCA2-206ENST00000638573 NKIRAS2Q9NYR9 191 aa13.89□□□□□ -0.19
COLCA2-206ENST00000638573 PCDHGB1Q9Y5G3 927 aa13.89□□□□□ -0.19
COLCA2-206ENST00000638573 IGHV3-64DA0A0J9YX35 117 aa13.88□□□□□ -0.19
COLCA2-206ENST00000638573 B4DSR2 109 aa13.88□□□□□ -0.19
COLCA2-206ENST00000638573 ATP6V1G2O95670 118 aa13.88□□□□□ -0.19
COLCA2-206ENST00000638573 KRT8P05787 483 aa13.88□□□□□ -0.19
COLCA2-206ENST00000638573 MSMBP08118 114 aa13.88□□□□□ -0.19
COLCA2-206ENST00000638573 HNF1AP20823 631 aa13.88□□□□□ -0.19
COLCA2-206ENST00000638573 ANOS1P23352 680 aa13.88□□□□□ -0.19
COLCA2-206ENST00000638573 CFL1P23528 166 aaKnown RBP13.88□□□□□ -0.19
COLCA2-206ENST00000638573 MRPS11P82912 194 aaKnown RBP13.88□□□□□ -0.19
COLCA2-206ENST00000638573 ROM1Q03395 351 aa13.88□□□□□ -0.19
COLCA2-206ENST00000638573 ZNF91Q05481 1191 aa13.88□□□□□ -0.19
COLCA2-206ENST00000638573 RIPK1Q13546 671 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms