RNA–Protein interactions for RNA: ENST00000617445.4

CCDC28A-203, Transcript of coiled-coil domain containing 28A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC28A, Length 1,240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-203ENST00000617445 CCDC124Q96CT7 223 aaKnown RBP15.95■□□□□ 0.14
CCDC28A-203ENST00000617445 NIPSNAP1Q9BPW8 284 aa15.95■□□□□ 0.14
CCDC28A-203ENST00000617445 ADAT1Q9BUB4 502 aaKnown RBP15.95■□□□□ 0.14
CCDC28A-203ENST00000617445 ZMAT3Q9HA38 289 aaKnown RBP15.95■□□□□ 0.14
CCDC28A-203ENST00000617445 IGHV2-70DA0A0C4DH43 119 aa15.94■□□□□ 0.14
CCDC28A-203ENST00000617445 IGHV3-64DA0A0J9YX35 117 aa15.94■□□□□ 0.14
CCDC28A-203ENST00000617445 KIR2DS1A0A191URI9 304 aa15.94■□□□□ 0.14
CCDC28A-203ENST00000617445 H3BN98 237 aa15.94■□□□□ 0.14
CCDC28A-203ENST00000617445 GNGT2O14610 69 aa15.94■□□□□ 0.14
CCDC28A-203ENST00000617445 PHYHO14832 338 aa15.94■□□□□ 0.14
CCDC28A-203ENST00000617445 NDUFA2O43678 99 aa15.94■□□□□ 0.14
CCDC28A-203ENST00000617445 FAM20BO75063 409 aa15.94■□□□□ 0.14
CCDC28A-203ENST00000617445 PAICSP22234 425 aaKnown RBP15.94■□□□□ 0.14
CCDC28A-203ENST00000617445 CFL1P23528 166 aaKnown RBP15.94■□□□□ 0.14
CCDC28A-203ENST00000617445 CD80P33681 288 aa15.94■□□□□ 0.14
CCDC28A-203ENST00000617445 PITPNBP48739 271 aa15.94■□□□□ 0.14
CCDC28A-203ENST00000617445 NPY4RP50391 375 aa15.94■□□□□ 0.14
CCDC28A-203ENST00000617445 PRKXP51817 358 aa15.94■□□□□ 0.14
CCDC28A-203ENST00000617445 PRSS12P56730 875 aa15.94■□□□□ 0.14
CCDC28A-203ENST00000617445 LINC01590Q5TEZ4 76 aa15.94■□□□□ 0.14
CCDC28A-203ENST00000617445 DOK3Q7L591 496 aa15.94■□□□□ 0.14
CCDC28A-203ENST00000617445 ADGRG5Q8IZF4 528 aa15.94■□□□□ 0.14
CCDC28A-203ENST00000617445 ZDHHC22Q8N966 263 aa15.94■□□□□ 0.14
CCDC28A-203ENST00000617445 OR2AE1Q8NHA4 323 aa15.94■□□□□ 0.14
CCDC28A-203ENST00000617445 INTS14Q96SY0 518 aa15.94■□□□□ 0.14
CCDC28A-203ENST00000617445 THTPAQ9BU02 230 aa15.94■□□□□ 0.14
CCDC28A-203ENST00000617445 MARCH7Q9H992 704 aa15.94■□□□□ 0.14
CCDC28A-203ENST00000617445 C14orf119Q9NWQ9 140 aa15.94■□□□□ 0.14
CCDC28A-203ENST00000617445 CLN8Q9UBY8 286 aa15.94■□□□□ 0.14
CCDC28A-203ENST00000617445 DHRS12A0PJE2 317 aa15.93■□□□□ 0.14
CCDC28A-203ENST00000617445 GLCEO94923 617 aa15.93■□□□□ 0.14
CCDC28A-203ENST00000617445 CLUP10909 449 aa15.93■□□□□ 0.14
CCDC28A-203ENST00000617445 PSKH1P11801 424 aa15.93■□□□□ 0.14
CCDC28A-203ENST00000617445 CFPP27918 469 aa15.93■□□□□ 0.14
CCDC28A-203ENST00000617445 GSTT1P30711 240 aa15.93■□□□□ 0.14
CCDC28A-203ENST00000617445 EIF2B1Q14232 305 aaKnown RBP15.93■□□□□ 0.14
CCDC28A-203ENST00000617445 MPPED2Q15777 294 aa15.93■□□□□ 0.14
CCDC28A-203ENST00000617445 KLF17Q5JT82 389 aaPredicted RBP15.93■□□□□ 0.14
CCDC28A-203ENST00000617445 OR52H1Q8NGJ2 320 aa15.93■□□□□ 0.14
CCDC28A-203ENST00000617445 C22orf15Q8WYQ4 148 aa15.93■□□□□ 0.14
CCDC28A-203ENST00000617445 DACT3Q96B18 629 aaPredicted RBP15.93■□□□□ 0.14
CCDC28A-203ENST00000617445 YY1AP1Q9H869 796 aa15.93■□□□□ 0.14
CCDC28A-203ENST00000617445 UFSP2Q9NUQ7 469 aa15.93■□□□□ 0.14
CCDC28A-203ENST00000617445 ZNF69Q9UC07 566 aa15.93■□□□□ 0.14
CCDC28A-203ENST00000617445 ANKRD30BLA7E2S9 258 aa15.92■□□□□ 0.14
CCDC28A-203ENST00000617445 LGALS8O00214 317 aa15.92■□□□□ 0.14
CCDC28A-203ENST00000617445 HMGN1P05114 100 aa15.92■□□□□ 0.14
CCDC28A-203ENST00000617445 HSD11B1P28845 292 aa15.92■□□□□ 0.14
CCDC28A-203ENST00000617445 PSMB10P40306 273 aa15.92■□□□□ 0.14
CCDC28A-203ENST00000617445 UBA52P62987 128 aaKnown RBP15.92■□□□□ 0.14
CCDC28A-203ENST00000617445 SNCBQ16143 134 aa15.92■□□□□ 0.14
CCDC28A-203ENST00000617445 FAM201AQ5SY85 155 aa15.92■□□□□ 0.14
CCDC28A-203ENST00000617445 PRAMEF6Q5VXH4 476 aa15.92■□□□□ 0.14
CCDC28A-203ENST00000617445 CD276Q5ZPR3 534 aa15.92■□□□□ 0.14
CCDC28A-203ENST00000617445 WDR25Q64LD2 544 aaPredicted RBP15.92■□□□□ 0.14
CCDC28A-203ENST00000617445 DPY19L4Q7Z388 723 aa15.92■□□□□ 0.14
CCDC28A-203ENST00000617445 OR56B2PQ8NGI1 322 aa15.92■□□□□ 0.14
CCDC28A-203ENST00000617445 OR6N2Q8NGY6 317 aa15.92■□□□□ 0.14
CCDC28A-203ENST00000617445 CANT1Q8WVQ1 401 aa15.92■□□□□ 0.14
CCDC28A-203ENST00000617445 RNF133Q8WVZ7 376 aa15.92■□□□□ 0.14
CCDC28A-203ENST00000617445 UPRTQ96BW1 309 aa15.92■□□□□ 0.14
CCDC28A-203ENST00000617445 ZMYND19Q96E35 227 aaPredicted RBP15.92■□□□□ 0.14
CCDC28A-203ENST00000617445 CLPTM1LQ96KA5 538 aa15.92■□□□□ 0.14
CCDC28A-203ENST00000617445 MS4A7Q9GZW8 240 aaPredicted RBP15.92■□□□□ 0.14
CCDC28A-203ENST00000617445 ZNF556Q9HAH1 456 aa15.92■□□□□ 0.14
CCDC28A-203ENST00000617445 ESM1Q9NQ30 184 aa15.92■□□□□ 0.14
CCDC28A-203ENST00000617445 TRAV38-1A0A0B4J264 116 aa15.91■□□□□ 0.14
CCDC28A-203ENST00000617445 SLC2A1P11166 492 aa15.91■□□□□ 0.14
CCDC28A-203ENST00000617445 MTNR1AP48039 350 aa15.91■□□□□ 0.14
CCDC28A-203ENST00000617445 CX3CR1P49238 355 aa15.91■□□□□ 0.14
CCDC28A-203ENST00000617445 TIGD6Q17RP2 521 aa15.91■□□□□ 0.14
CCDC28A-203ENST00000617445 C11orf91Q3C1V1 193 aa15.91■□□□□ 0.14
CCDC28A-203ENST00000617445 DNAL1Q4LDG9 190 aa15.91■□□□□ 0.14
CCDC28A-203ENST00000617445 C9orf139Q6ZV77 190 aa15.91■□□□□ 0.14
CCDC28A-203ENST00000617445 TRPM8Q7Z2W7 1104 aa15.91■□□□□ 0.14
CCDC28A-203ENST00000617445 ERI1Q8IV48 349 aaKnown RBP15.91■□□□□ 0.14
CCDC28A-203ENST00000617445 SIGLECL1Q8N7X8 197 aa15.91■□□□□ 0.14
CCDC28A-203ENST00000617445 C3orf56Q8N813 242 aa15.91■□□□□ 0.14
CCDC28A-203ENST00000617445 ZNF454Q8N9F8 522 aa15.91■□□□□ 0.14
CCDC28A-203ENST00000617445 NUDT16L1Q9BRJ7 211 aaKnown RBP15.91■□□□□ 0.14
CCDC28A-203ENST00000617445 ABHD6Q9BV23 337 aa15.91■□□□□ 0.14
CCDC28A-203ENST00000617445 TEX12Q9BXU0 123 aa15.91■□□□□ 0.14
CCDC28A-203ENST00000617445 RGCCQ9H4X1 137 aa15.91■□□□□ 0.14
CCDC28A-203ENST00000617445 PDP1Q9P0J1 537 aaPredicted RBP15.91■□□□□ 0.14
CCDC28A-203ENST00000617445 ERVK-18Q9QC07 812 aa15.91■□□□□ 0.14
CCDC28A-203ENST00000617445 N6AMT1Q9Y5N5 214 aa15.91■□□□□ 0.14
CCDC28A-203ENST00000617445 FAM183AA6NL82 134 aa15.9■□□□□ 0.14
CCDC28A-203ENST00000617445 PRR23D1E9PI22 279 aaPredicted RBP15.9■□□□□ 0.14
CCDC28A-203ENST00000617445 TBX1O43435 398 aa15.9■□□□□ 0.14
CCDC28A-203ENST00000617445 ENSAO43768 121 aaKnown RBP15.9■□□□□ 0.14
CCDC28A-203ENST00000617445 LIPFP07098 398 aa15.9■□□□□ 0.14
CCDC28A-203ENST00000617445 ANXA2P07355 339 aaKnown RBP15.9■□□□□ 0.14
CCDC28A-203ENST00000617445 PRR23D2P0DMB1 279 aaPredicted RBP15.9■□□□□ 0.14
CCDC28A-203ENST00000617445 OSMP13725 252 aa15.9■□□□□ 0.14
CCDC28A-203ENST00000617445 ANXA8P13928 327 aa15.9■□□□□ 0.14
CCDC28A-203ENST00000617445 PRTN3P24158 256 aa15.9■□□□□ 0.14
CCDC28A-203ENST00000617445 BPIFB3P59826 476 aa15.9■□□□□ 0.14
CCDC28A-203ENST00000617445 ZNF841Q6ZN19 808 aa15.9■□□□□ 0.14
CCDC28A-203ENST00000617445 SLC16A9Q7RTY1 509 aa15.9■□□□□ 0.14
CCDC28A-203ENST00000617445 TIGD4Q8IY51 512 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms