RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 GLT8D1Q68CQ7 371 aa15.36■□□□□ 0.05
SHKBP1-224ENST00000600718 METAP1DQ6UB28 335 aaPredicted RBP15.36■□□□□ 0.05
SHKBP1-224ENST00000600718 PGAP1Q75T13 922 aa15.36■□□□□ 0.05
SHKBP1-224ENST00000600718 LRRC28Q86X40 367 aaPredicted RBP15.36■□□□□ 0.05
SHKBP1-224ENST00000600718 GABRG1Q8N1C3 465 aa15.36■□□□□ 0.05
SHKBP1-224ENST00000600718 DNAAF1Q8NEP3 725 aa15.36■□□□□ 0.05
SHKBP1-224ENST00000600718 CMTM3Q96MX0 182 aa15.36■□□□□ 0.05
SHKBP1-224ENST00000600718 SOX7Q9BT81 388 aa15.36■□□□□ 0.05
SHKBP1-224ENST00000600718 C1QTNF5Q9BXJ0 243 aa15.36■□□□□ 0.05
SHKBP1-224ENST00000600718 RGCCQ9H4X1 137 aa15.36■□□□□ 0.05
SHKBP1-224ENST00000600718 V9GYH0 126 aa15.36■□□□□ 0.05
SHKBP1-224ENST00000600718 V9GYS6 101 aa15.36■□□□□ 0.05
SHKBP1-224ENST00000600718 SPTBN4Q9H254 2564 aa15.36■□□□□ 0.05
SHKBP1-224ENST00000600718 DMXL2Q8TDJ6 3036 aa15.35■□□□□ 0.05
SHKBP1-224ENST00000600718 LOC100509620A0A075B734 347 aa15.35■□□□□ 0.05
SHKBP1-224ENST00000600718 LOC390937A0A1W2PQ73 354 aa15.35■□□□□ 0.05
SHKBP1-224ENST00000600718 DHRS3O75911 302 aa15.35■□□□□ 0.05
SHKBP1-224ENST00000600718 LYZL6O75951 148 aa15.35■□□□□ 0.05
SHKBP1-224ENST00000600718 GLI4P10075 376 aa15.35■□□□□ 0.05
SHKBP1-224ENST00000600718 CALCBP10092 127 aa15.35■□□□□ 0.05
SHKBP1-224ENST00000600718 SFTPCP11686 197 aa15.35■□□□□ 0.05
SHKBP1-224ENST00000600718 UBE2NP61088 152 aaKnown RBP15.35■□□□□ 0.05
SHKBP1-224ENST00000600718 RBPJQ06330 500 aa15.35■□□□□ 0.05
SHKBP1-224ENST00000600718 P2RY6Q15077 328 aa15.35■□□□□ 0.05
SHKBP1-224ENST00000600718 PRR30Q53SZ7 412 aaPredicted RBP15.35■□□□□ 0.05
SHKBP1-224ENST00000600718 BEND4Q6ZU67 534 aa15.35■□□□□ 0.05
SHKBP1-224ENST00000600718 SAMD12Q8N8I0 201 aa15.35■□□□□ 0.05
SHKBP1-224ENST00000600718 KDF1Q8NAX2 398 aaPredicted RBP15.35■□□□□ 0.05
SHKBP1-224ENST00000600718 C10orf35Q96D05 121 aa15.35■□□□□ 0.05
SHKBP1-224ENST00000600718 SFXN3Q9BWM7 321 aa15.35■□□□□ 0.05
SHKBP1-224ENST00000600718 PTPRQQ9UMZ3 2332 aa15.35■□□□□ 0.05
SHKBP1-224ENST00000600718 FREM1Q5H8C1 2179 aa15.35■□□□□ 0.05
SHKBP1-224ENST00000600718 FAM25AB3EWG3 89 aa15.35■□□□□ 0.05
SHKBP1-224ENST00000600718 FAM25CB3EWG5 89 aa15.35■□□□□ 0.05
SHKBP1-224ENST00000600718 FAM25GB3EWG6 89 aa15.35■□□□□ 0.05
SHKBP1-224ENST00000600718 RAD51DO75771 328 aa15.35■□□□□ 0.05
SHKBP1-224ENST00000600718 PTBP1P26599 531 aaKnown RBP eCLIP15.35■□□□□ 0.05
SHKBP1-224ENST00000600718 ZNF529Q6P280 563 aa15.35■□□□□ 0.05
SHKBP1-224ENST00000600718 CNIH2Q6PI25 160 aa15.35■□□□□ 0.05
SHKBP1-224ENST00000600718 FAM131AQ6UXB0 335 aa15.35■□□□□ 0.05
SHKBP1-224ENST00000600718 COLCA1Q6ZS62 124 aa15.35■□□□□ 0.05
SHKBP1-224ENST00000600718 RPRMLQ8N4K4 120 aa15.35■□□□□ 0.05
SHKBP1-224ENST00000600718 NKAIN3Q8N8D7 197 aa15.35■□□□□ 0.05
SHKBP1-224ENST00000600718 OR1M1Q8NGA1 313 aa15.35■□□□□ 0.05
SHKBP1-224ENST00000600718 FOXRED1Q96CU9 486 aaPredicted RBP15.35■□□□□ 0.05
SHKBP1-224ENST00000600718 ZNF486Q96H40 463 aaPredicted RBP15.35■□□□□ 0.05
SHKBP1-224ENST00000600718 POM121L2Q96KW2 1035 aa15.35■□□□□ 0.05
SHKBP1-224ENST00000600718 PLEKHA1Q9HB21 404 aa15.35■□□□□ 0.05
SHKBP1-224ENST00000600718 CYSLTR2Q9NS75 346 aa15.35■□□□□ 0.05
SHKBP1-224ENST00000600718 STEAP1Q9UHE8 339 aa15.35■□□□□ 0.05
SHKBP1-224ENST00000600718 PIEZO1Q92508 2521 aa15.34■□□□□ 0.05
SHKBP1-224ENST00000600718 EDN3P14138 238 aa15.34■□□□□ 0.05
SHKBP1-224ENST00000600718 ELK1P19419 428 aa15.34■□□□□ 0.05
SHKBP1-224ENST00000600718 RAB3AP20336 220 aa15.34■□□□□ 0.05
SHKBP1-224ENST00000600718 BDKRB2P30411 391 aa15.34■□□□□ 0.05
SHKBP1-224ENST00000600718 SCAND1P57086 179 aa15.34■□□□□ 0.05
SHKBP1-224ENST00000600718 IFITM2Q01629 132 aa15.34■□□□□ 0.05
SHKBP1-224ENST00000600718 C3P1Q6ZMU1 363 aa15.34■□□□□ 0.05
SHKBP1-224ENST00000600718 MDP1Q86V88 176 aa15.34■□□□□ 0.05
SHKBP1-224ENST00000600718 NAXEQ8NCW5 288 aa15.34■□□□□ 0.05
SHKBP1-224ENST00000600718 OR51A2Q8NGJ7 313 aa15.34■□□□□ 0.05
SHKBP1-224ENST00000600718 OR5H6Q8NGV6 325 aa15.34■□□□□ 0.05
SHKBP1-224ENST00000600718 REEP6Q96HR9 211 aa15.34■□□□□ 0.05
SHKBP1-224ENST00000600718 SOSTQ9BQB4 213 aa15.34■□□□□ 0.05
SHKBP1-224ENST00000600718 OPN3Q9H1Y3 402 aaPredicted RBP15.34■□□□□ 0.05
SHKBP1-224ENST00000600718 LIN7BQ9HAP6 207 aa15.34■□□□□ 0.05
SHKBP1-224ENST00000600718 TMEM138Q9NPI0 162 aa15.34■□□□□ 0.05
SHKBP1-224ENST00000600718 ABCB10Q9NRK6 738 aa15.34■□□□□ 0.05
SHKBP1-224ENST00000600718 MGAQ8IWI9 3026 aa15.34■□□□□ 0.05
SHKBP1-224ENST00000600718 A0A0B4J203 849 aa15.33■□□□□ 0.05
SHKBP1-224ENST00000600718 C5orf49A4QMS7 147 aa15.33■□□□□ 0.05
SHKBP1-224ENST00000600718 A6NIN4 97 aa15.33■□□□□ 0.05
SHKBP1-224ENST00000600718 DHRS7CA6NNS2 312 aa15.33■□□□□ 0.05
SHKBP1-224ENST00000600718 SLC17A2O00624 439 aa15.33■□□□□ 0.05
SHKBP1-224ENST00000600718 XRCC2O43543 280 aa15.33■□□□□ 0.05
SHKBP1-224ENST00000600718 APOA1P02647 267 aa15.33■□□□□ 0.05
SHKBP1-224ENST00000600718 SERPINA5P05154 406 aa15.33■□□□□ 0.05
SHKBP1-224ENST00000600718 ERCC1P07992 297 aaPredicted RBP15.33■□□□□ 0.05
SHKBP1-224ENST00000600718 RCVRNP35243 200 aa15.33■□□□□ 0.05
SHKBP1-224ENST00000600718 APLNRP35414 380 aa15.33■□□□□ 0.05
SHKBP1-224ENST00000600718 SPOCK1Q08629 439 aa15.33■□□□□ 0.05
SHKBP1-224ENST00000600718 XKRXQ6PP77 449 aa15.33■□□□□ 0.05
SHKBP1-224ENST00000600718 POC5Q8NA72 575 aa15.33■□□□□ 0.05
SHKBP1-224ENST00000600718 AKAP1Q92667 903 aaKnown RBP eCLIP15.33■□□□□ 0.05
SHKBP1-224ENST00000600718 ZNF75AQ96N20 296 aa15.33■□□□□ 0.05
SHKBP1-224ENST00000600718 CCDC32Q9BV29 185 aa15.33■□□□□ 0.05
SHKBP1-224ENST00000600718 DOCK7Q96N67 2140 aa15.33■□□□□ 0.04
SHKBP1-224ENST00000600718 THBS4P35443 961 aa15.33■□□□□ 0.04
SHKBP1-224ENST00000600718 TALDO1P37837 337 aa15.33■□□□□ 0.04
SHKBP1-224ENST00000600718 GLYATL3Q5SZD4 288 aa15.33■□□□□ 0.04
SHKBP1-224ENST00000600718 STEAP3Q658P3 488 aa15.33■□□□□ 0.04
SHKBP1-224ENST00000600718 ZNF584Q8IVC4 421 aa15.33■□□□□ 0.04
SHKBP1-224ENST00000600718 C17orf78Q8N4C9 275 aa15.33■□□□□ 0.04
SHKBP1-224ENST00000600718 LGALS14Q8TCE9 139 aa15.33■□□□□ 0.04
SHKBP1-224ENST00000600718 ETV7Q9Y603 341 aa15.33■□□□□ 0.04
SHKBP1-224ENST00000600718 ANKRD11Q6UB99 2663 aaPredicted RBP15.32■□□□□ 0.04
SHKBP1-224ENST00000600718 EIF4EP06730 217 aaKnown RBP15.32■□□□□ 0.04
SHKBP1-224ENST00000600718 CCNOP22674 350 aa15.32■□□□□ 0.04
SHKBP1-224ENST00000600718 HOXC12P31275 282 aa15.32■□□□□ 0.04
SHKBP1-224ENST00000600718 RAB11BQ15907 218 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms