RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 TVP23AA6NH52 213 aa13.9□□□□□ -0.18
CCNF-203ENST00000564236 ZNF878C9JN71 531 aa13.9□□□□□ -0.18
CCNF-203ENST00000564236 XRCC2O43543 280 aa13.9□□□□□ -0.18
CCNF-203ENST00000564236 CCNB2O95067 398 aa13.9□□□□□ -0.18
CCNF-203ENST00000564236 LHBP01229 141 aa13.9□□□□□ -0.18
CCNF-203ENST00000564236 MMP9P14780 707 aa13.9□□□□□ -0.18
CCNF-203ENST00000564236 SPI1P17947 270 aa13.9□□□□□ -0.18
CCNF-203ENST00000564236 FMO3P31513 532 aa13.9□□□□□ -0.18
CCNF-203ENST00000564236 CRMP1Q14194 572 aa13.9□□□□□ -0.18
CCNF-203ENST00000564236 GK3PQ14409 553 aa13.9□□□□□ -0.18
CCNF-203ENST00000564236 LINC01590Q5TEZ4 76 aa13.9□□□□□ -0.18
CCNF-203ENST00000564236 CD300LDQ6UXZ3 194 aa13.9□□□□□ -0.18
CCNF-203ENST00000564236 OR2T33Q8NG76 320 aa13.9□□□□□ -0.18
CCNF-203ENST00000564236 OR4Q3Q8NH05 313 aa13.9□□□□□ -0.18
CCNF-203ENST00000564236 OR2AE1Q8NHA4 323 aa13.9□□□□□ -0.18
CCNF-203ENST00000564236 SLAMF6Q96DU3 332 aa13.9□□□□□ -0.18
CCNF-203ENST00000564236 SLITRK2Q9H156 845 aa13.9□□□□□ -0.18
CCNF-203ENST00000564236 UFSP2Q9NUQ7 469 aa13.9□□□□□ -0.18
CCNF-203ENST00000564236 TRAV38-1A0A0B4J264 116 aa13.89□□□□□ -0.19
CCNF-203ENST00000564236 GGT3PA6NGU5 568 aa13.89□□□□□ -0.19
CCNF-203ENST00000564236 FGF12P61328 243 aa13.89□□□□□ -0.19
CCNF-203ENST00000564236 MZT1Q08AG7 82 aa13.89□□□□□ -0.19
CCNF-203ENST00000564236 MICAQ29983 383 aa13.89□□□□□ -0.19
CCNF-203ENST00000564236 TEX36Q5VZQ5 186 aa13.89□□□□□ -0.19
CCNF-203ENST00000564236 C16orf87Q6PH81 154 aa13.89□□□□□ -0.19
CCNF-203ENST00000564236 PRSS45Q7RTY3 260 aa13.89□□□□□ -0.19
CCNF-203ENST00000564236 TMEM86BQ8N661 226 aa13.89□□□□□ -0.19
CCNF-203ENST00000564236 GCSAMQ8N6F7 178 aa13.89□□□□□ -0.19
CCNF-203ENST00000564236 AQP11Q8NBQ7 271 aa13.89□□□□□ -0.19
CCNF-203ENST00000564236 OR51L1Q8NGJ5 315 aa13.89□□□□□ -0.19
CCNF-203ENST00000564236 COPS4Q9BT78 406 aa13.89□□□□□ -0.19
CCNF-203ENST00000564236 TSSK6Q9BXA6 273 aa13.89□□□□□ -0.19
CCNF-203ENST00000564236 TOR3AQ9H497 397 aa13.89□□□□□ -0.19
CCNF-203ENST00000564236 MARCH7Q9H992 704 aa13.89□□□□□ -0.19
CCNF-203ENST00000564236 NOX4Q9NPH5 578 aa13.89□□□□□ -0.19
CCNF-203ENST00000564236 CMC2Q9NRP2 79 aa13.89□□□□□ -0.19
CCNF-203ENST00000564236 TBC1D23Q9NUY8 699 aa13.89□□□□□ -0.19
CCNF-203ENST00000564236 ERVK-18Q9QC07 812 aa13.89□□□□□ -0.19
CCNF-203ENST00000564236 KAAG1Q9UBP8 84 aa13.89□□□□□ -0.19
CCNF-203ENST00000564236 SOX21Q9Y651 276 aaPredicted RBP13.89□□□□□ -0.19
CCNF-203ENST00000564236 IGHV3OR16-10A0A075B7F0 116 aa13.88□□□□□ -0.19
CCNF-203ENST00000564236 OOEPA6NGQ2 149 aa13.88□□□□□ -0.19
CCNF-203ENST00000564236 ZNF879B4DU55 563 aa13.88□□□□□ -0.19
CCNF-203ENST00000564236 P2RY10O00398 339 aa13.88□□□□□ -0.19
CCNF-203ENST00000564236 ZNF593O00488 134 aaPredicted RBP13.88□□□□□ -0.19
CCNF-203ENST00000564236 CFHR2P36980 270 aa13.88□□□□□ -0.19
CCNF-203ENST00000564236 GRB2P62993 217 aaKnown RBP13.88□□□□□ -0.19
CCNF-203ENST00000564236 GPR157Q5UAW9 335 aa13.88□□□□□ -0.19
CCNF-203ENST00000564236 CYP2R1Q6VVX0 501 aa13.88□□□□□ -0.19
CCNF-203ENST00000564236 ZNF511Q8NB15 262 aa13.88□□□□□ -0.19
CCNF-203ENST00000564236 C19orf18Q8NEA5 215 aa13.88□□□□□ -0.19
CCNF-203ENST00000564236 OR56B2PQ8NGI1 322 aa13.88□□□□□ -0.19
CCNF-203ENST00000564236 OR9Q1Q8NGQ5 310 aa13.88□□□□□ -0.19
CCNF-203ENST00000564236 RNF133Q8WVZ7 376 aa13.88□□□□□ -0.19
CCNF-203ENST00000564236 DMRTB1Q96MA1 342 aa13.88□□□□□ -0.19
CCNF-203ENST00000564236 UNKLQ9H9P5 680 aaKnown RBP13.88□□□□□ -0.19
CCNF-203ENST00000564236 C14orf119Q9NWQ9 140 aa13.88□□□□□ -0.19
CCNF-203ENST00000564236 VNN3Q9NY84 501 aa13.88□□□□□ -0.19
CCNF-203ENST00000564236 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.87□□□□□ -0.19
CCNF-203ENST00000564236 DHRS12A0PJE2 317 aa13.87□□□□□ -0.19
CCNF-203ENST00000564236 ARRDC5A6NEK1 342 aa13.87□□□□□ -0.19
CCNF-203ENST00000564236 SRRM5B3KS81 715 aa13.87□□□□□ -0.19
CCNF-203ENST00000564236 FCN3O75636 299 aa13.87□□□□□ -0.19
CCNF-203ENST00000564236 IFNGP01579 166 aa13.87□□□□□ -0.19
CCNF-203ENST00000564236 SPARCP09486 303 aa13.87□□□□□ -0.19
CCNF-203ENST00000564236 SLC15A1P46059 708 aa13.87□□□□□ -0.19
CCNF-203ENST00000564236 PRKXP51817 358 aa13.87□□□□□ -0.19
CCNF-203ENST00000564236 FAM3AP98173 230 aa13.87□□□□□ -0.19
CCNF-203ENST00000564236 HOXA4Q00056 320 aaPredicted RBP13.87□□□□□ -0.19
CCNF-203ENST00000564236 TRIM25Q14258 630 aaKnown RBP13.87□□□□□ -0.19
CCNF-203ENST00000564236 DEFB112Q30KQ8 113 aa13.87□□□□□ -0.19
CCNF-203ENST00000564236 OR2T5Q6IEZ7 315 aa13.87□□□□□ -0.19
CCNF-203ENST00000564236 Q6YL49 198 aa13.87□□□□□ -0.19
CCNF-203ENST00000564236 FAM90A1Q86YD7 464 aa13.87□□□□□ -0.19
CCNF-203ENST00000564236 OR2T29Q8NH02 315 aa13.87□□□□□ -0.19
CCNF-203ENST00000564236 TBX15Q96SF7 602 aa13.87□□□□□ -0.19
CCNF-203ENST00000564236 SP140LQ9H930 580 aa13.87□□□□□ -0.19
CCNF-203ENST00000564236 RNPEPL1Q9HAU8 725 aa13.87□□□□□ -0.19
CCNF-203ENST00000564236 SMURF1Q9HCE7 757 aa13.87□□□□□ -0.19
CCNF-203ENST00000564236 ARMC1Q9NVT9 282 aa13.87□□□□□ -0.19
CCNF-203ENST00000564236 PKD1L1Q8TDX9 2849 aa13.86□□□□□ -0.19
CCNF-203ENST00000564236 A0A1B0GUS0 222 aa13.86□□□□□ -0.19
CCNF-203ENST00000564236 HOXA3O43365 443 aaPredicted RBP13.86□□□□□ -0.19
CCNF-203ENST00000564236 WIPF1O43516 503 aa13.86□□□□□ -0.19
CCNF-203ENST00000564236 ECDO95905 644 aaPredicted RBP13.86□□□□□ -0.19
CCNF-203ENST00000564236 APOC1P02654 83 aa13.86□□□□□ -0.19
CCNF-203ENST00000564236 GYPBP06028 91 aa13.86□□□□□ -0.19
CCNF-203ENST00000564236 CLUP10909 449 aa13.86□□□□□ -0.19
CCNF-203ENST00000564236 ZNF3P17036 446 aa13.86□□□□□ -0.19
CCNF-203ENST00000564236 CFL1P23528 166 aaKnown RBP13.86□□□□□ -0.19
CCNF-203ENST00000564236 RPL15P61313 204 aaKnown RBP13.86□□□□□ -0.19
CCNF-203ENST00000564236 GNGT1P63211 74 aa13.86□□□□□ -0.19
CCNF-203ENST00000564236 SFRP4Q6FHJ7 346 aaPredicted RBP13.86□□□□□ -0.19
CCNF-203ENST00000564236 BRD3OSQ6XYD6 125 aa13.86□□□□□ -0.19
CCNF-203ENST00000564236 SLC16A9Q7RTY1 509 aa13.86□□□□□ -0.19
CCNF-203ENST00000564236 DHFR2Q86XF0 187 aa13.86□□□□□ -0.19
CCNF-203ENST00000564236 C11orf53Q8IXP5 236 aa13.86□□□□□ -0.19
CCNF-203ENST00000564236 PNLDC1Q8NA58 520 aaKnown RBP13.86□□□□□ -0.19
CCNF-203ENST00000564236 OR52H1Q8NGJ2 320 aa13.86□□□□□ -0.19
CCNF-203ENST00000564236 TMIGD2Q96BF3 282 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms