RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 REEP6Q96HR9 211 aa7.7□□□□□ -1.18
HDAC6-232ENST00000489053 OR8B2Q96RD0 313 aa7.7□□□□□ -1.18
HDAC6-232ENST00000489053 CADM1Q9BY67 442 aaKnown RBP7.7□□□□□ -1.18
HDAC6-232ENST00000489053 NMNAT2Q9BZQ4 307 aa7.7□□□□□ -1.18
HDAC6-232ENST00000489053 PNRC2Q9NPJ4 139 aaKnown RBP7.7□□□□□ -1.18
HDAC6-232ENST00000489053 TRIM36Q9NQ86 728 aa7.7□□□□□ -1.18
HDAC6-232ENST00000489053 FAM53CQ9NYF3 392 aa7.7□□□□□ -1.18
HDAC6-232ENST00000489053 TVP23BQ9NYZ1 205 aa7.7□□□□□ -1.18
HDAC6-232ENST00000489053 MRPL15Q9P015 296 aaKnown RBP7.7□□□□□ -1.18
HDAC6-232ENST00000489053 MIOXQ9UGB7 285 aa7.7□□□□□ -1.18
HDAC6-232ENST00000489053 PPIAL4AQ9Y536 164 aa7.7□□□□□ -1.18
HDAC6-232ENST00000489053 SVEP1Q4LDE5 3571 aa7.69□□□□□ -1.18
HDAC6-232ENST00000489053 LOC105371242A0A075B767 164 aa7.69□□□□□ -1.18
HDAC6-232ENST00000489053 ANXA2P2A6NMY6 339 aa7.69□□□□□ -1.18
HDAC6-232ENST00000489053 H0YL77 283 aa7.69□□□□□ -1.18
HDAC6-232ENST00000489053 ZNF205O95201 554 aa7.69□□□□□ -1.18
HDAC6-232ENST00000489053 GRPP07492 148 aa7.69□□□□□ -1.18
HDAC6-232ENST00000489053 EPHA1P21709 976 aa7.69□□□□□ -1.18
HDAC6-232ENST00000489053 CPT2P23786 658 aa7.69□□□□□ -1.18
HDAC6-232ENST00000489053 GNB2P62879 340 aa7.69□□□□□ -1.18
HDAC6-232ENST00000489053 ZNF92Q03936 586 aa7.69□□□□□ -1.18
HDAC6-232ENST00000489053 APOFQ13790 326 aa7.69□□□□□ -1.18
HDAC6-232ENST00000489053 ATP6AP1Q15904 470 aa7.69□□□□□ -1.18
HDAC6-232ENST00000489053 KRTAP27-1Q3LI81 207 aa7.69□□□□□ -1.18
HDAC6-232ENST00000489053 SPRNQ5BIV9 151 aa7.69□□□□□ -1.18
HDAC6-232ENST00000489053 KCTD18Q6PI47 426 aaPredicted RBP7.69□□□□□ -1.18
HDAC6-232ENST00000489053 TMEM179BQ7Z7N9 219 aa7.69□□□□□ -1.18
HDAC6-232ENST00000489053 NAA40Q86UY6 237 aa7.69□□□□□ -1.18
HDAC6-232ENST00000489053 LRRC28Q86X40 367 aaPredicted RBP7.69□□□□□ -1.18
HDAC6-232ENST00000489053 CPOQ8IVL8 374 aa7.69□□□□□ -1.18
HDAC6-232ENST00000489053 HS3ST5Q8IZT8 346 aa7.69□□□□□ -1.18
HDAC6-232ENST00000489053 CELF2-AS1Q8N7Q2 184 aa7.69□□□□□ -1.18
HDAC6-232ENST00000489053 OR56B2PQ8NGI1 322 aa7.69□□□□□ -1.18
HDAC6-232ENST00000489053 OR5K1Q8NHB7 308 aa7.69□□□□□ -1.18
HDAC6-232ENST00000489053 ZNRF4Q8WWF5 429 aa7.69□□□□□ -1.18
HDAC6-232ENST00000489053 SLC7A6OSQ96CW6 309 aaPredicted RBP7.69□□□□□ -1.18
HDAC6-232ENST00000489053 HIST1H2AAQ96QV6 131 aa7.69□□□□□ -1.18
HDAC6-232ENST00000489053 DDOQ99489 341 aa7.69□□□□□ -1.18
HDAC6-232ENST00000489053 ABHD6Q9BV23 337 aa7.69□□□□□ -1.18
HDAC6-232ENST00000489053 PAPOLGQ9BWT3 736 aaKnown RBP7.69□□□□□ -1.18
HDAC6-232ENST00000489053 SSBP3Q9BWW4 388 aaPredicted RBP7.69□□□□□ -1.18
HDAC6-232ENST00000489053 SUCNR1Q9BXA5 334 aa7.69□□□□□ -1.18
HDAC6-232ENST00000489053 RGCCQ9H4X1 137 aa7.69□□□□□ -1.18
HDAC6-232ENST00000489053 NIPAL2Q9H841 368 aa7.69□□□□□ -1.18
HDAC6-232ENST00000489053 PATZ1Q9HBE1 687 aaKnown RBP7.69□□□□□ -1.18
HDAC6-232ENST00000489053 RNF7Q9UBF6 113 aa7.69□□□□□ -1.18
HDAC6-232ENST00000489053 CLN8Q9UBY8 286 aa7.69□□□□□ -1.18
HDAC6-232ENST00000489053 IKZF2Q9UKS7 526 aa7.69□□□□□ -1.18
HDAC6-232ENST00000489053 GTF2A1LQ9UNN4 478 aa7.69□□□□□ -1.18
HDAC6-232ENST00000489053 LRCH1Q9Y2L9 728 aa7.69□□□□□ -1.18
HDAC6-232ENST00000489053 AP4S1Q9Y587 144 aa7.69□□□□□ -1.18
HDAC6-232ENST00000489053 ORC6Q9Y5N6 252 aa7.69□□□□□ -1.18
HDAC6-232ENST00000489053 AUP1Q9Y679 476 aa7.69□□□□□ -1.18
HDAC6-232ENST00000489053 TMEM14AQ9Y6G1 99 aa7.69□□□□□ -1.18
HDAC6-232ENST00000489053 CEACAM18A8MTB9 384 aa7.68□□□□□ -1.18
HDAC6-232ENST00000489053 HAX1O00165 279 aa7.68□□□□□ -1.18
HDAC6-232ENST00000489053 MLNRO43193 412 aa7.68□□□□□ -1.18
HDAC6-232ENST00000489053 SELENOFO60613 162 aa7.68□□□□□ -1.18
HDAC6-232ENST00000489053 RGS9O75916 674 aaPredicted RBP7.68□□□□□ -1.18
HDAC6-232ENST00000489053 MRPL3P09001 348 aaKnown RBP7.68□□□□□ -1.18
HDAC6-232ENST00000489053 ADRA2CP18825 462 aa7.68□□□□□ -1.18
HDAC6-232ENST00000489053 OTX1P32242 354 aaPredicted RBP7.68□□□□□ -1.18
HDAC6-232ENST00000489053 CD200P41217 278 aa7.68□□□□□ -1.18
HDAC6-232ENST00000489053 GATA4P43694 442 aa7.68□□□□□ -1.18
HDAC6-232ENST00000489053 PITPNBP48739 271 aa7.68□□□□□ -1.18
HDAC6-232ENST00000489053 CRISP1P54107 249 aa7.68□□□□□ -1.18
HDAC6-232ENST00000489053 ZNF121P58317 390 aaPredicted RBP7.68□□□□□ -1.18
HDAC6-232ENST00000489053 ACTR3P61158 418 aa7.68□□□□□ -1.18
HDAC6-232ENST00000489053 ESRRGP62508 458 aa7.68□□□□□ -1.18
HDAC6-232ENST00000489053 ACTG1P63261 375 aa7.68□□□□□ -1.18
HDAC6-232ENST00000489053 PCK2Q16822 640 aa7.68□□□□□ -1.18
HDAC6-232ENST00000489053 ZNF181Q2M3W8 571 aa7.68□□□□□ -1.18
HDAC6-232ENST00000489053 RSPO1Q2MKA7 263 aaPredicted RBP7.68□□□□□ -1.18
HDAC6-232ENST00000489053 ZNF829Q3KNS6 432 aaPredicted RBP7.68□□□□□ -1.18
HDAC6-232ENST00000489053 ZNF362Q5T0B9 420 aaPredicted RBP7.68□□□□□ -1.18
HDAC6-232ENST00000489053 PRAMEF6Q5VXH4 476 aa7.68□□□□□ -1.18
HDAC6-232ENST00000489053 TMEM236Q5W0B7 351 aa7.68□□□□□ -1.18
HDAC6-232ENST00000489053 KCTD8Q6ZWB6 473 aa7.68□□□□□ -1.18
HDAC6-232ENST00000489053 SLC16A9Q7RTY1 509 aa7.68□□□□□ -1.18
HDAC6-232ENST00000489053 C1QL2Q7Z5L3 287 aa7.68□□□□□ -1.18
HDAC6-232ENST00000489053 C10orf67Q8IYJ2 551 aa7.68□□□□□ -1.18
HDAC6-232ENST00000489053 PLPP7Q8NBV4 271 aa7.68□□□□□ -1.18
HDAC6-232ENST00000489053 PAPD5Q8NDF8 572 aaKnown RBP7.68□□□□□ -1.18
HDAC6-232ENST00000489053 DEFB108BQ8NET1 73 aa7.68□□□□□ -1.18
HDAC6-232ENST00000489053 CSNK2A3Q8NEV1 391 aa7.68□□□□□ -1.18
HDAC6-232ENST00000489053 OR10S1Q8NGN2 331 aa7.68□□□□□ -1.18
HDAC6-232ENST00000489053 OTOSQ8NHW6 89 aa7.68□□□□□ -1.18
HDAC6-232ENST00000489053 RNF133Q8WVZ7 376 aa7.68□□□□□ -1.18
HDAC6-232ENST00000489053 NEIL1Q96FI4 390 aaPredicted RBP7.68□□□□□ -1.18
HDAC6-232ENST00000489053 TECTBQ96PL2 329 aa7.68□□□□□ -1.18
HDAC6-232ENST00000489053 CNN2Q99439 309 aaKnown RBP7.68□□□□□ -1.18
HDAC6-232ENST00000489053 MICU1Q9BPX6 476 aa7.68□□□□□ -1.18
HDAC6-232ENST00000489053 C19orf24Q9BVV8 132 aa7.68□□□□□ -1.18
HDAC6-232ENST00000489053 MROQ9BYG7 248 aa7.68□□□□□ -1.18
HDAC6-232ENST00000489053 MARCH7Q9H992 704 aa7.68□□□□□ -1.18
HDAC6-232ENST00000489053 SLC25A19Q9HC21 320 aa7.68□□□□□ -1.18
HDAC6-232ENST00000489053 C1orf123Q9NWV4 160 aa7.68□□□□□ -1.18
HDAC6-232ENST00000489053 DCAF16Q9NXF7 216 aa7.68□□□□□ -1.18
HDAC6-232ENST00000489053 MALRD1Q5VYJ5 2156 aa7.68□□□□□ -1.18
HDAC6-232ENST00000489053 A0A0A6YYJ9 748 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms