RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 MT-ND5P03915 603 aa16.55■□□□□ 0.24
PCOLCE-208ENST00000487172 DDOSTP39656 456 aa16.55■□□□□ 0.24
PCOLCE-208ENST00000487172 CCR9P51686 369 aa16.55■□□□□ 0.24
PCOLCE-208ENST00000487172 FAM3AP98173 230 aa16.55■□□□□ 0.24
PCOLCE-208ENST00000487172 NKPD1Q17RQ9 610 aa16.55■□□□□ 0.24
PCOLCE-208ENST00000487172 OR2T2Q6IF00 324 aa16.55■□□□□ 0.24
PCOLCE-208ENST00000487172 LRRC75A-AS1Q8N1F1 130 aa16.55■□□□□ 0.24
PCOLCE-208ENST00000487172 ZNF786Q8N393 782 aa16.55■□□□□ 0.24
PCOLCE-208ENST00000487172 KLHL36Q8N4N3 616 aa16.55■□□□□ 0.24
PCOLCE-208ENST00000487172 OR52N1Q8NH53 320 aa16.55■□□□□ 0.24
PCOLCE-208ENST00000487172 TRMT61AQ96FX7 289 aaKnown RBP16.55■□□□□ 0.24
PCOLCE-208ENST00000487172 CDCA4Q9BXL8 241 aa16.55■□□□□ 0.24
PCOLCE-208ENST00000487172 GSX2Q9BZM3 304 aa16.55■□□□□ 0.24
PCOLCE-208ENST00000487172 DYNLRB1Q9NP97 96 aa16.55■□□□□ 0.24
PCOLCE-208ENST00000487172 PAK1IP1Q9NWT1 392 aaPredicted RBP16.55■□□□□ 0.24
PCOLCE-208ENST00000487172 CLEC2DQ9UHP7 191 aa16.55■□□□□ 0.24
PCOLCE-208ENST00000487172 BLOC1S6Q9UL45 172 aa16.55■□□□□ 0.24
PCOLCE-208ENST00000487172 FLNBO75369 2602 aaKnown RBP16.54■□□□□ 0.24
PCOLCE-208ENST00000487172 hCG_38984A0A1B0GV85 526 aa16.54■□□□□ 0.24
PCOLCE-208ENST00000487172 PLSCR5A0PG75 271 aa16.54■□□□□ 0.24
PCOLCE-208ENST00000487172 CD300LBA8K4G0 201 aa16.54■□□□□ 0.24
PCOLCE-208ENST00000487172 HTR1AP08908 422 aa16.54■□□□□ 0.24
PCOLCE-208ENST00000487172 CDKN1AP38936 164 aa16.54■□□□□ 0.24
PCOLCE-208ENST00000487172 PSMB10P40306 273 aa16.54■□□□□ 0.24
PCOLCE-208ENST00000487172 ALDH3B1P43353 468 aa16.54■□□□□ 0.24
PCOLCE-208ENST00000487172 TGM4P49221 684 aa16.54■□□□□ 0.24
PCOLCE-208ENST00000487172 BCL2L15Q5TBC7 163 aa16.54■□□□□ 0.24
PCOLCE-208ENST00000487172 PRSS35Q8N3Z0 413 aa16.54■□□□□ 0.24
PCOLCE-208ENST00000487172 ZNF485Q8NCK3 441 aa16.54■□□□□ 0.24
PCOLCE-208ENST00000487172 OR8G5Q8NG78 346 aa16.54■□□□□ 0.24
PCOLCE-208ENST00000487172 OR2G2Q8NGZ5 317 aa16.54■□□□□ 0.24
PCOLCE-208ENST00000487172 SPRYD4Q8WW59 207 aaPredicted RBP16.54■□□□□ 0.24
PCOLCE-208ENST00000487172 PPP1R14AQ96A00 147 aa16.54■□□□□ 0.24
PCOLCE-208ENST00000487172 LYZL4Q96KX0 146 aa16.54■□□□□ 0.24
PCOLCE-208ENST00000487172 AKAP6Q13023 2319 aa16.54■□□□□ 0.24
PCOLCE-208ENST00000487172 APCP25054 2843 aa16.53■□□□□ 0.24
PCOLCE-208ENST00000487172 A0A1B0GWJ7 208 aa16.53■□□□□ 0.24
PCOLCE-208ENST00000487172 GGT3PA6NGU5 568 aa16.53■□□□□ 0.24
PCOLCE-208ENST00000487172 C17orf100A8MU93 164 aa16.53■□□□□ 0.24
PCOLCE-208ENST00000487172 ADH4P08319 380 aa16.53■□□□□ 0.24
PCOLCE-208ENST00000487172 ATP6V1B1P15313 513 aa16.53■□□□□ 0.24
PCOLCE-208ENST00000487172 GBX2P52951 348 aaPredicted RBP16.53■□□□□ 0.24
PCOLCE-208ENST00000487172 OR8B8Q15620 311 aa16.53■□□□□ 0.24
PCOLCE-208ENST00000487172 ZMAT1Q5H9K5 638 aa16.53■□□□□ 0.24
PCOLCE-208ENST00000487172 WDR38Q5JTN6 314 aa16.53■□□□□ 0.24
PCOLCE-208ENST00000487172 Q6ZSR3 168 aa16.53■□□□□ 0.24
PCOLCE-208ENST00000487172 NANOGP1Q8N7R0 232 aa16.53■□□□□ 0.24
PCOLCE-208ENST00000487172 PLPP7Q8NBV4 271 aa16.53■□□□□ 0.24
PCOLCE-208ENST00000487172 RAB1BQ9H0U4 201 aa16.53■□□□□ 0.24
PCOLCE-208ENST00000487172 BABAM2Q9NXR7 383 aa16.53■□□□□ 0.24
PCOLCE-208ENST00000487172 NKIRAS2Q9NYR9 191 aa16.53■□□□□ 0.24
PCOLCE-208ENST00000487172 FRRS1LQ9P0K9 344 aa16.53■□□□□ 0.24
PCOLCE-208ENST00000487172 GTF2A1LQ9UNN4 478 aa16.53■□□□□ 0.24
PCOLCE-208ENST00000487172 SLC22A13Q9Y226 551 aa16.53■□□□□ 0.24
PCOLCE-208ENST00000487172 CENPEQ02224 2701 aa16.53■□□□□ 0.24
PCOLCE-208ENST00000487172 SPG11Q96JI7 2443 aa16.53■□□□□ 0.24
PCOLCE-208ENST00000487172 LOC390937A0A1W2PQ73 354 aa16.52■□□□□ 0.24
PCOLCE-208ENST00000487172 RGS10O43665 173 aa16.52■□□□□ 0.24
PCOLCE-208ENST00000487172 NAT2P11245 290 aa16.52■□□□□ 0.24
PCOLCE-208ENST00000487172 CCL1P22362 96 aa16.52■□□□□ 0.24
PCOLCE-208ENST00000487172 PTH2RP49190 550 aa16.52■□□□□ 0.24
PCOLCE-208ENST00000487172 GSK3AP49840 483 aa16.52■□□□□ 0.24
PCOLCE-208ENST00000487172 ZNF81P51508 661 aa16.52■□□□□ 0.24
PCOLCE-208ENST00000487172 NANOS3P60323 173 aaKnown RBP16.52■□□□□ 0.24
PCOLCE-208ENST00000487172 GABARAPL2P60520 117 aa16.52■□□□□ 0.24
PCOLCE-208ENST00000487172 TNK1Q13470 666 aa16.52■□□□□ 0.24
PCOLCE-208ENST00000487172 ALKBH1Q13686 389 aaKnown RBP16.52■□□□□ 0.24
PCOLCE-208ENST00000487172 IRF3Q14653 427 aa16.52■□□□□ 0.24
PCOLCE-208ENST00000487172 CCDC58Q4VC31 144 aa16.52■□□□□ 0.24
PCOLCE-208ENST00000487172 OR2G6Q5TZ20 316 aa16.52■□□□□ 0.24
PCOLCE-208ENST00000487172 KRT74Q7RTS7 529 aa16.52■□□□□ 0.24
PCOLCE-208ENST00000487172 PRSS48Q7RTY5 328 aa16.52■□□□□ 0.24
PCOLCE-208ENST00000487172 NEU4Q8WWR8 484 aaPredicted RBP16.52■□□□□ 0.24
PCOLCE-208ENST00000487172 SGCDQ92629 289 aa16.52■□□□□ 0.24
PCOLCE-208ENST00000487172 DIRC2Q96SL1 478 aa16.52■□□□□ 0.24
PCOLCE-208ENST00000487172 VRK1Q99986 396 aaPredicted RBP16.52■□□□□ 0.24
PCOLCE-208ENST00000487172 SLC30A2Q9BRI3 323 aa16.52■□□□□ 0.24
PCOLCE-208ENST00000487172 GPR84Q9NQS5 396 aa16.52■□□□□ 0.24
PCOLCE-208ENST00000487172 ERVK-18Q9QC07 812 aa16.52■□□□□ 0.24
PCOLCE-208ENST00000487172 ZDHHC8Q9ULC8 765 aa16.52■□□□□ 0.24
PCOLCE-208ENST00000487172 ERGIC3Q9Y282 383 aa16.52■□□□□ 0.24
PCOLCE-208ENST00000487172 ABCA12Q86UK0 2595 aa16.52■□□□□ 0.23
PCOLCE-208ENST00000487172 A0A1B0GTI1 187 aa16.51■□□□□ 0.23
PCOLCE-208ENST00000487172 MRPS14O60783 128 aaKnown RBP16.51■□□□□ 0.23
PCOLCE-208ENST00000487172 UBCP0CG48 685 aaKnown RBP16.51■□□□□ 0.23
PCOLCE-208ENST00000487172 KIR3DL2P43630 455 aa16.51■□□□□ 0.23
PCOLCE-208ENST00000487172 GFOD2Q3B7J2 385 aa16.51■□□□□ 0.23
PCOLCE-208ENST00000487172 PCGF3Q3KNV8 242 aa16.51■□□□□ 0.23
PCOLCE-208ENST00000487172 TMEM244Q5VVB8 128 aa16.51■□□□□ 0.23
PCOLCE-208ENST00000487172 Q6ZR03 302 aa16.51■□□□□ 0.23
PCOLCE-208ENST00000487172 OR5AS1Q8N127 324 aa16.51■□□□□ 0.23
PCOLCE-208ENST00000487172 ZCCHC24Q8N2G6 241 aaKnown RBP16.51■□□□□ 0.23
PCOLCE-208ENST00000487172 CCDC54Q8NEL0 328 aa16.51■□□□□ 0.23
PCOLCE-208ENST00000487172 CSNK2A3Q8NEV1 391 aa16.51■□□□□ 0.23
PCOLCE-208ENST00000487172 OR56B2PQ8NGI1 322 aa16.51■□□□□ 0.23
PCOLCE-208ENST00000487172 OR13G1Q8NGZ3 307 aa16.51■□□□□ 0.23
PCOLCE-208ENST00000487172 OR51E1Q8TCB6 317 aa16.51■□□□□ 0.23
PCOLCE-208ENST00000487172 GATAD2BQ8WXI9 593 aa16.51■□□□□ 0.23
PCOLCE-208ENST00000487172 SORCS2Q96PQ0 1159 aa16.51■□□□□ 0.23
PCOLCE-208ENST00000487172 FOXC2Q99958 501 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms