RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-223	ENST00000486991	GBX2	P52951	348 aa	Predicted RBP	11.23	□□□□□ -0.61
NR1H3-223	ENST00000486991	WNT4	P56705	351 aa		11.23	□□□□□ -0.61
NR1H3-223	ENST00000486991	NAAA	Q02083	359 aa		11.23	□□□□□ -0.61
NR1H3-223	ENST00000486991	MED22	Q15528	200 aa		11.23	□□□□□ -0.61
NR1H3-223	ENST00000486991	ZNF829	Q3KNS6	432 aa	Predicted RBP	11.23	□□□□□ -0.61
NR1H3-223	ENST00000486991	KLB	Q86Z14	1044 aa		11.23	□□□□□ -0.61
NR1H3-223	ENST00000486991	SPART	Q8N0X7	666 aa		11.23	□□□□□ -0.61
NR1H3-223	ENST00000486991	PAQR4	Q8N4S7	273 aa	Predicted RBP	11.23	□□□□□ -0.61
NR1H3-223	ENST00000486991	PELI1	Q96FA3	418 aa		11.23	□□□□□ -0.61
NR1H3-223	ENST00000486991	DCLRE1C	Q96SD1	692 aa	Known RBP	11.23	□□□□□ -0.61
NR1H3-223	ENST00000486991	DOK1	Q99704	481 aa		11.23	□□□□□ -0.61
NR1H3-223	ENST00000486991	OR51B6	Q9H340	312 aa		11.23	□□□□□ -0.61
NR1H3-223	ENST00000486991	EIF3K	Q9UBQ5	218 aa	Known RBP	11.23	□□□□□ -0.61
NR1H3-223	ENST00000486991	TMEM269	A0A1B0GVZ9	245 aa		11.22	□□□□□ -0.61
NR1H3-223	ENST00000486991	LOC110117498-PIK3R3	F6TDL0	507 aa		11.22	□□□□□ -0.61
NR1H3-223	ENST00000486991	LCAT	P04180	440 aa		11.22	□□□□□ -0.61
NR1H3-223	ENST00000486991	ATP6V1B1	P15313	513 aa		11.22	□□□□□ -0.61
NR1H3-223	ENST00000486991	CALCR	P30988	508 aa		11.22	□□□□□ -0.61
NR1H3-223	ENST00000486991	OTX1	P32242	354 aa	Predicted RBP	11.22	□□□□□ -0.61
NR1H3-223	ENST00000486991	DCTD	P32321	178 aa		11.22	□□□□□ -0.61
NR1H3-223	ENST00000486991	WNT5A	P41221	380 aa		11.22	□□□□□ -0.61
NR1H3-223	ENST00000486991	ZNF121	P58317	390 aa	Predicted RBP	11.22	□□□□□ -0.61
NR1H3-223	ENST00000486991	PSMA6	P60900	246 aa	Known RBP	11.22	□□□□□ -0.61
NR1H3-223	ENST00000486991	EMX1	Q04741	257 aa	Predicted RBP	11.22	□□□□□ -0.61
NR1H3-223	ENST00000486991	HGFAC	Q04756	655 aa		11.22	□□□□□ -0.61
NR1H3-223	ENST00000486991	MFGE8	Q08431	387 aa	Predicted RBP	11.22	□□□□□ -0.61
NR1H3-223	ENST00000486991	SPHAR	Q15513	63 aa		11.22	□□□□□ -0.61
NR1H3-223	ENST00000486991	TBCE	Q15813	527 aa	Predicted RBP	11.22	□□□□□ -0.61
NR1H3-223	ENST00000486991	KRTAP27-1	Q3LI81	207 aa		11.22	□□□□□ -0.61
NR1H3-223	ENST00000486991	MALRD1	Q5VYJ5	2156 aa		11.22	□□□□□ -0.61
NR1H3-223	ENST00000486991	ARL9	Q6T311	187 aa		11.22	□□□□□ -0.61
NR1H3-223	ENST00000486991	DRAM2	Q6UX65	266 aa		11.22	□□□□□ -0.61
NR1H3-223	ENST00000486991	FAM57B	Q71RH2	274 aa		11.22	□□□□□ -0.61
NR1H3-223	ENST00000486991	NAA40	Q86UY6	237 aa		11.22	□□□□□ -0.61
NR1H3-223	ENST00000486991	IL17RD	Q8NFM7	739 aa		11.22	□□□□□ -0.61
NR1H3-223	ENST00000486991	PGAM5	Q96HS1	289 aa		11.22	□□□□□ -0.61
NR1H3-223	ENST00000486991	C4orf45	Q96LM5	186 aa		11.22	□□□□□ -0.61
NR1H3-223	ENST00000486991	OR5M11	Q96RB7	305 aa		11.22	□□□□□ -0.61
NR1H3-223	ENST00000486991	ACOT13	Q9NPJ3	140 aa		11.22	□□□□□ -0.61
NR1H3-223	ENST00000486991	BABAM2	Q9NXR7	383 aa		11.22	□□□□□ -0.61
NR1H3-223	ENST00000486991		R4GMQ9	66 aa		11.22	□□□□□ -0.61
NR1H3-223	ENST00000486991		A0A096LNT2	108 aa		11.21	□□□□□ -0.61
NR1H3-223	ENST00000486991		E9PI62	339 aa		11.21	□□□□□ -0.61
NR1H3-223	ENST00000486991		H7C417	338 aa		11.21	□□□□□ -0.61
NR1H3-223	ENST00000486991	TBX1	O43435	398 aa		11.21	□□□□□ -0.61
NR1H3-223	ENST00000486991	PNP	P00491	289 aa		11.21	□□□□□ -0.61
NR1H3-223	ENST00000486991	LCK	P06239	509 aa		11.21	□□□□□ -0.61
NR1H3-223	ENST00000486991	FAM157B	P0CG42	384 aa		11.21	□□□□□ -0.61
NR1H3-223	ENST00000486991	HSMCR30	P0CW71	290 aa		11.21	□□□□□ -0.61
NR1H3-223	ENST00000486991	ZNF35	P13682	527 aa		11.21	□□□□□ -0.61
NR1H3-223	ENST00000486991	RGS6	P49758	472 aa		11.21	□□□□□ -0.61
NR1H3-223	ENST00000486991	GTF2A1	P52655	376 aa	Predicted RBP	11.21	□□□□□ -0.61
NR1H3-223	ENST00000486991	SRSF2	Q01130	221 aa	Known RBP	11.21	□□□□□ -0.61
NR1H3-223	ENST00000486991	NEDD8	Q15843	81 aa		11.21	□□□□□ -0.61
NR1H3-223	ENST00000486991	BCL2L15	Q5TBC7	163 aa		11.21	□□□□□ -0.61
NR1H3-223	ENST00000486991	KCTD8	Q6ZWB6	473 aa		11.21	□□□□□ -0.61
NR1H3-223	ENST00000486991	EGFL6	Q8IUX8	553 aa		11.21	□□□□□ -0.61
NR1H3-223	ENST00000486991	ZNF485	Q8NCK3	441 aa		11.21	□□□□□ -0.61
NR1H3-223	ENST00000486991	RORB	Q92753	470 aa		11.21	□□□□□ -0.61
NR1H3-223	ENST00000486991	CACNG6	Q9BXT2	260 aa		11.21	□□□□□ -0.61
NR1H3-223	ENST00000486991	SP140L	Q9H930	580 aa		11.21	□□□□□ -0.61
NR1H3-223	ENST00000486991	TRIM36	Q9NQ86	728 aa		11.21	□□□□□ -0.61
NR1H3-223	ENST00000486991	FAM206A	Q9NX38	181 aa		11.21	□□□□□ -0.61
NR1H3-223	ENST00000486991	LSM2	Q9Y333	95 aa	Known RBP	11.21	□□□□□ -0.61
NR1H3-223	ENST00000486991	SVEP1	Q4LDE5	3571 aa		11.21	□□□□□ -0.62
NR1H3-223	ENST00000486991	ANK2	Q01484	3957 aa		11.2	□□□□□ -0.62
NR1H3-223	ENST00000486991	NBEAL1	Q6ZS30	2694 aa		11.2	□□□□□ -0.62
NR1H3-223	ENST00000486991	PNMA8C	A0A1B0GUJ8	204 aa		11.2	□□□□□ -0.62
NR1H3-223	ENST00000486991		A8MV72	311 aa	Predicted RBP	11.2	□□□□□ -0.62
NR1H3-223	ENST00000486991	PHF1	O43189	567 aa	Predicted RBP	11.2	□□□□□ -0.62
NR1H3-223	ENST00000486991	SRSF10	O75494	262 aa	Known RBP	11.2	□□□□□ -0.62
NR1H3-223	ENST00000486991	LALBA	P00709	142 aa		11.2	□□□□□ -0.62
NR1H3-223	ENST00000486991	CSF3	P09919	207 aa		11.2	□□□□□ -0.62
NR1H3-223	ENST00000486991	SMIM18	P0DKX4	95 aa		11.2	□□□□□ -0.62
NR1H3-223	ENST00000486991	PCMT1	P22061	227 aa		11.2	□□□□□ -0.62
NR1H3-223	ENST00000486991	MMP16	P51512	607 aa		11.2	□□□□□ -0.62
NR1H3-223	ENST00000486991	MRPL28	Q13084	256 aa	Known RBP	11.2	□□□□□ -0.62
NR1H3-223	ENST00000486991	DOC2B	Q14184	412 aa		11.2	□□□□□ -0.62
NR1H3-223	ENST00000486991	MST1L	Q2TV78	715 aa		11.2	□□□□□ -0.62
NR1H3-223	ENST00000486991	GFOD2	Q3B7J2	385 aa		11.2	□□□□□ -0.62
NR1H3-223	ENST00000486991	CLEC2A	Q6UVW9	174 aa		11.2	□□□□□ -0.62
NR1H3-223	ENST00000486991	RFPL4B	Q6ZWI9	263 aa		11.2	□□□□□ -0.62
NR1H3-223	ENST00000486991	ZNF367	Q7RTV3	350 aa		11.2	□□□□□ -0.62
NR1H3-223	ENST00000486991	CATSPERD	Q86XM0	798 aa		11.2	□□□□□ -0.62
NR1H3-223	ENST00000486991	ZNF101	Q8IZC7	436 aa		11.2	□□□□□ -0.62
NR1H3-223	ENST00000486991	ZFP41	Q8N8Y5	198 aa		11.2	□□□□□ -0.62
NR1H3-223	ENST00000486991	OR2G2	Q8NGZ5	317 aa		11.2	□□□□□ -0.62
NR1H3-223	ENST00000486991	ABHD4	Q8TB40	342 aa		11.2	□□□□□ -0.62
NR1H3-223	ENST00000486991	HAVCR2	Q8TDQ0	301 aa		11.2	□□□□□ -0.62
NR1H3-223	ENST00000486991	PPP1R14A	Q96A00	147 aa		11.2	□□□□□ -0.62
NR1H3-223	ENST00000486991	APOBEC3D	Q96AK3	386 aa	Predicted RBP	11.2	□□□□□ -0.62
NR1H3-223	ENST00000486991	C1QTNF5	Q9BXJ0	243 aa		11.2	□□□□□ -0.62
NR1H3-223	ENST00000486991	PBOV1	Q9GZY1	135 aa		11.2	□□□□□ -0.62
NR1H3-223	ENST00000486991	MOB1A	Q9H8S9	216 aa		11.2	□□□□□ -0.62
NR1H3-223	ENST00000486991	VCX3A	Q9NNX9	186 aa		11.2	□□□□□ -0.62
NR1H3-223	ENST00000486991	OR52A1	Q9UKL2	312 aa		11.2	□□□□□ -0.62
NR1H3-223	ENST00000486991	SLC22A13	Q9Y226	551 aa		11.2	□□□□□ -0.62
NR1H3-223	ENST00000486991	STARD10	Q9Y365	291 aa		11.2	□□□□□ -0.62
NR1H3-223	ENST00000486991	SPEF1	Q9Y4P9	236 aa		11.2	□□□□□ -0.62
NR1H3-223	ENST00000486991	C5orf63	A6NC05	138 aa		11.19	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms