RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 PTBP3O95758 552 aaKnown RBP17.47■□□□□ 0.39
COL9A3-207ENST00000467819 GYPAP02724 150 aa17.47■□□□□ 0.39
COL9A3-207ENST00000467819 CRYBA1P05813 215 aa17.47■□□□□ 0.39
COL9A3-207ENST00000467819 SPARCP09486 303 aa17.47■□□□□ 0.39
COL9A3-207ENST00000467819 BPIFB3P59826 476 aa17.47■□□□□ 0.39
COL9A3-207ENST00000467819 TAF13Q15543 124 aa17.47■□□□□ 0.39
COL9A3-207ENST00000467819 RPL13AP3Q6NVV1 102 aa17.47■□□□□ 0.39
COL9A3-207ENST00000467819 Q6YL49 198 aa17.47■□□□□ 0.39
COL9A3-207ENST00000467819 PGAM4Q8N0Y7 254 aa17.47■□□□□ 0.39
COL9A3-207ENST00000467819 SLC37A3Q8NCC5 494 aa17.47■□□□□ 0.39
COL9A3-207ENST00000467819 OR56B2PQ8NGI1 322 aa17.47■□□□□ 0.39
COL9A3-207ENST00000467819 TBX15Q96SF7 602 aa17.47■□□□□ 0.39
COL9A3-207ENST00000467819 DDOQ99489 341 aa17.47■□□□□ 0.39
COL9A3-207ENST00000467819 BTBD10Q9BSF8 475 aa17.47■□□□□ 0.39
COL9A3-207ENST00000467819 CHIAQ9BZP6 476 aa17.47■□□□□ 0.39
COL9A3-207ENST00000467819 NOX4Q9NPH5 578 aa17.47■□□□□ 0.39
COL9A3-207ENST00000467819 CENPMQ9NSP4 180 aa17.47■□□□□ 0.39
COL9A3-207ENST00000467819 MRPL15Q9P015 296 aaKnown RBP17.47■□□□□ 0.39
COL9A3-207ENST00000467819 MMP24Q9Y5R2 645 aa17.47■□□□□ 0.39
COL9A3-207ENST00000467819 LYVE1Q9Y5Y7 322 aa17.47■□□□□ 0.39
COL9A3-207ENST00000467819 WNK1Q9H4A3 2382 aa17.46■□□□□ 0.39
COL9A3-207ENST00000467819 TRAV38-1A0A0B4J264 116 aa17.46■□□□□ 0.39
COL9A3-207ENST00000467819 hCG_1807616A0A1W2PRN6 198 aa17.46■□□□□ 0.39
COL9A3-207ENST00000467819 KNG1P01042 644 aa17.46■□□□□ 0.39
COL9A3-207ENST00000467819 GYPBP06028 91 aa17.46■□□□□ 0.39
COL9A3-207ENST00000467819 MMP9P14780 707 aa17.46■□□□□ 0.39
COL9A3-207ENST00000467819 RAG2P55895 527 aa17.46■□□□□ 0.39
COL9A3-207ENST00000467819 SRSF4Q08170 494 aaKnown RBP17.46■□□□□ 0.39
COL9A3-207ENST00000467819 KIR3DL3Q8N743 410 aa17.46■□□□□ 0.39
COL9A3-207ENST00000467819 PLPP7Q8NBV4 271 aa17.46■□□□□ 0.39
COL9A3-207ENST00000467819 OR4C15Q8NGM1 316 aa17.46■□□□□ 0.39
COL9A3-207ENST00000467819 OR8D4Q8NGM9 314 aa17.46■□□□□ 0.39
COL9A3-207ENST00000467819 SLAMF6Q96DU3 332 aa17.46■□□□□ 0.39
COL9A3-207ENST00000467819 WDFY2Q96P53 400 aa17.46■□□□□ 0.39
COL9A3-207ENST00000467819 TRIM36Q9NQ86 728 aa17.46■□□□□ 0.39
COL9A3-207ENST00000467819 TBC1D23Q9NUY8 699 aa17.46■□□□□ 0.39
COL9A3-207ENST00000467819 TGP01266 2768 aa17.45■□□□□ 0.38
COL9A3-207ENST00000467819 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.45■□□□□ 0.38
COL9A3-207ENST00000467819 CENPVL3A0A0U1RRI6 287 aa17.45■□□□□ 0.38
COL9A3-207ENST00000467819 TNFRSF11BO00300 401 aa17.45■□□□□ 0.38
COL9A3-207ENST00000467819 SNX3O60493 162 aa17.45■□□□□ 0.38
COL9A3-207ENST00000467819 LIPFP07098 398 aa17.45■□□□□ 0.38
COL9A3-207ENST00000467819 MELTFP08582 738 aa17.45■□□□□ 0.38
COL9A3-207ENST00000467819 ENTPD1P49961 510 aa17.45■□□□□ 0.38
COL9A3-207ENST00000467819 POU4F2Q12837 409 aa17.45■□□□□ 0.38
COL9A3-207ENST00000467819 ZNF362Q5T0B9 420 aaPredicted RBP17.45■□□□□ 0.38
COL9A3-207ENST00000467819 METTL11BQ5VVY1 283 aa17.45■□□□□ 0.38
COL9A3-207ENST00000467819 FAM90A1Q86YD7 464 aa17.45■□□□□ 0.38
COL9A3-207ENST00000467819 GCSAMQ8N6F7 178 aa17.45■□□□□ 0.38
COL9A3-207ENST00000467819 PNLDC1Q8NA58 520 aaKnown RBP17.45■□□□□ 0.38
COL9A3-207ENST00000467819 SPERTQ8NA61 448 aa17.45■□□□□ 0.38
COL9A3-207ENST00000467819 ZNF511Q8NB15 262 aa17.45■□□□□ 0.38
COL9A3-207ENST00000467819 OR4F5Q8NH21 305 aa17.45■□□□□ 0.38
COL9A3-207ENST00000467819 GATAD2BQ8WXI9 593 aa17.45■□□□□ 0.38
COL9A3-207ENST00000467819 KCNJ15Q99712 375 aa17.45■□□□□ 0.38
COL9A3-207ENST00000467819 BEX1Q9HBH7 125 aa17.45■□□□□ 0.38
COL9A3-207ENST00000467819 IGHV3OR15-7A0A075B7D8 119 aa17.44■□□□□ 0.38
COL9A3-207ENST00000467819 TNFRSF13BO14836 293 aaPredicted RBP17.44■□□□□ 0.38
COL9A3-207ENST00000467819 TBX1O43435 398 aa17.44■□□□□ 0.38
COL9A3-207ENST00000467819 NDUFA2O43678 99 aa17.44■□□□□ 0.38
COL9A3-207ENST00000467819 KRT36O76013 467 aa17.44■□□□□ 0.38
COL9A3-207ENST00000467819 FMO3P31513 532 aa17.44■□□□□ 0.38
COL9A3-207ENST00000467819 DEFA6Q01524 100 aa17.44■□□□□ 0.38
COL9A3-207ENST00000467819 CRMP1Q14194 572 aa17.44■□□□□ 0.38
COL9A3-207ENST00000467819 CYP2R1Q6VVX0 501 aa17.44■□□□□ 0.38
COL9A3-207ENST00000467819 C17orf107Q6ZR85 190 aa17.44■□□□□ 0.38
COL9A3-207ENST00000467819 WFDC12Q8WWY7 111 aa17.44■□□□□ 0.38
COL9A3-207ENST00000467819 LHX4Q969G2 390 aa17.44■□□□□ 0.38
COL9A3-207ENST00000467819 FAM71F1Q96KD3 344 aaPredicted RBP17.44■□□□□ 0.38
COL9A3-207ENST00000467819 OPA3Q9H6K4 179 aa17.44■□□□□ 0.38
COL9A3-207ENST00000467819 ARL8BQ9NVJ2 186 aa17.44■□□□□ 0.38
COL9A3-207ENST00000467819 C14orf119Q9NWQ9 140 aa17.44■□□□□ 0.38
COL9A3-207ENST00000467819 IL20Q9NYY1 176 aa17.44■□□□□ 0.38
COL9A3-207ENST00000467819 C1RLQ9NZP8 487 aa17.44■□□□□ 0.38
COL9A3-207ENST00000467819 A0A1B0GUS0 222 aa17.43■□□□□ 0.38
COL9A3-207ENST00000467819 ZNF878C9JN71 531 aa17.43■□□□□ 0.38
COL9A3-207ENST00000467819 ZNF593O00488 134 aaPredicted RBP17.43■□□□□ 0.38
COL9A3-207ENST00000467819 DVL1O14640 695 aa17.43■□□□□ 0.38
COL9A3-207ENST00000467819 XRCC2O43543 280 aa17.43■□□□□ 0.38
COL9A3-207ENST00000467819 FCN3O75636 299 aa17.43■□□□□ 0.38
COL9A3-207ENST00000467819 GASTP01350 101 aa17.43■□□□□ 0.38
COL9A3-207ENST00000467819 CLUP10909 449 aa17.43■□□□□ 0.38
COL9A3-207ENST00000467819 HMGA2P52926 109 aa17.43■□□□□ 0.38
COL9A3-207ENST00000467819 ARF6P62330 175 aa17.43■□□□□ 0.38
COL9A3-207ENST00000467819 RELBQ01201 579 aa17.43■□□□□ 0.38
COL9A3-207ENST00000467819 MZT1Q08AG7 82 aa17.43■□□□□ 0.38
COL9A3-207ENST00000467819 PPP1R8Q12972 351 aaKnown RBP17.43■□□□□ 0.38
COL9A3-207ENST00000467819 RASSF6Q6ZTQ3 369 aa17.43■□□□□ 0.38
COL9A3-207ENST00000467819 BTN2A1Q7KYR7 527 aa17.43■□□□□ 0.38
COL9A3-207ENST00000467819 DEFB107AQ8IZN7 70 aa17.43■□□□□ 0.38
COL9A3-207ENST00000467819 OR6K6Q8NGW6 343 aa17.43■□□□□ 0.38
COL9A3-207ENST00000467819 OR8S1Q8NH09 359 aa17.43■□□□□ 0.38
COL9A3-207ENST00000467819 ST8SIA4Q92187 359 aa17.43■□□□□ 0.38
COL9A3-207ENST00000467819 TSSK6Q9BXA6 273 aa17.43■□□□□ 0.38
COL9A3-207ENST00000467819 SIRPDQ9H106 197 aa17.43■□□□□ 0.38
COL9A3-207ENST00000467819 ACOXLQ9NUZ1 547 aa17.43■□□□□ 0.38
COL9A3-207ENST00000467819 TAGLN3Q9UI15 199 aa17.43■□□□□ 0.38
COL9A3-207ENST00000467819 VWFP04275 2813 aa17.43■□□□□ 0.38
COL9A3-207ENST00000467819 NOTCH1P46531 2555 aa17.42■□□□□ 0.38
COL9A3-207ENST00000467819 IGHV1-69DA0A0B4J2H0 117 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms