RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 SRP9P49458 86 aaKnown RBP3.93□□□□□ -1.78
SBDSP1-204ENST00000453858 IL13RA2Q14627 380 aa3.93□□□□□ -1.78
SBDSP1-204ENST00000453858 RBMS2Q15434 407 aaKnown RBP3.93□□□□□ -1.78
SBDSP1-204ENST00000453858 MPPED2Q15777 294 aa3.93□□□□□ -1.78
SBDSP1-204ENST00000453858 KCNJ8Q15842 424 aa3.93□□□□□ -1.78
SBDSP1-204ENST00000453858 MS4A18Q3C1V0 323 aa3.93□□□□□ -1.78
SBDSP1-204ENST00000453858 SGO1Q5FBB7 561 aa3.93□□□□□ -1.78
SBDSP1-204ENST00000453858 PABPC1L2AQ5JQF8 200 aa3.93□□□□□ -1.78
SBDSP1-204ENST00000453858 DCST2Q5T1A1 773 aa3.93□□□□□ -1.78
SBDSP1-204ENST00000453858 CARD17Q5XLA6 110 aa3.93□□□□□ -1.78
SBDSP1-204ENST00000453858 TMEM53Q6P2H8 277 aa3.93□□□□□ -1.78
SBDSP1-204ENST00000453858 C4orf22Q6V702 233 aa3.93□□□□□ -1.78
SBDSP1-204ENST00000453858 EIF3MQ7L2H7 374 aaKnown RBP3.93□□□□□ -1.78
SBDSP1-204ENST00000453858 GOLGA7Q7Z5G4 137 aa3.93□□□□□ -1.78
SBDSP1-204ENST00000453858 DPPA2Q7Z7J5 298 aa3.93□□□□□ -1.78
SBDSP1-204ENST00000453858 LRRC8AQ8IWT6 810 aa3.93□□□□□ -1.78
SBDSP1-204ENST00000453858 OR6Q1Q8NGQ2 317 aa3.93□□□□□ -1.78
SBDSP1-204ENST00000453858 ZNF563Q8TA94 476 aa3.93□□□□□ -1.78
SBDSP1-204ENST00000453858 PNPT1Q8TCS8 783 aaKnown RBP3.93□□□□□ -1.78
SBDSP1-204ENST00000453858 TMEM255BQ8WV15 326 aa3.93□□□□□ -1.78
SBDSP1-204ENST00000453858 C1orf54Q8WWF1 131 aa3.93□□□□□ -1.78
SBDSP1-204ENST00000453858 DCUN1D4Q92564 292 aa3.93□□□□□ -1.78
SBDSP1-204ENST00000453858 CNOT9Q92600 299 aaKnown RBP3.93□□□□□ -1.78
SBDSP1-204ENST00000453858 CMBLQ96DG6 245 aa3.93□□□□□ -1.78
SBDSP1-204ENST00000453858 MALSU1Q96EH3 234 aa3.93□□□□□ -1.78
SBDSP1-204ENST00000453858 NOL4LQ96MY1 436 aaPredicted RBP3.93□□□□□ -1.78
SBDSP1-204ENST00000453858 MS4A4EQ96PG1 132 aa3.93□□□□□ -1.78
SBDSP1-204ENST00000453858 CDRT15Q96T59 188 aa3.93□□□□□ -1.78
SBDSP1-204ENST00000453858 CTDSP1Q9GZU7 261 aa3.93□□□□□ -1.78
SBDSP1-204ENST00000453858 EGLN3Q9H6Z9 239 aa3.93□□□□□ -1.78
SBDSP1-204ENST00000453858 PNRC2Q9NPJ4 139 aaKnown RBP3.93□□□□□ -1.78
SBDSP1-204ENST00000453858 ABCB10Q9NRK6 738 aa3.93□□□□□ -1.78
SBDSP1-204ENST00000453858 ANO10Q9NW15 660 aa3.93□□□□□ -1.78
SBDSP1-204ENST00000453858 NUDT4Q9NZJ9 180 aa3.93□□□□□ -1.78
SBDSP1-204ENST00000453858 VPS29Q9UBQ0 182 aa3.93□□□□□ -1.78
SBDSP1-204ENST00000453858 EIF3KQ9UBQ5 218 aaKnown RBP3.93□□□□□ -1.78
SBDSP1-204ENST00000453858 PRPF19Q9UMS4 504 aaKnown RBP3.93□□□□□ -1.78
SBDSP1-204ENST00000453858 LPAP08519 4548 aa3.93□□□□□ -1.78
SBDSP1-204ENST00000453858 TRBV5-7A0A0A0MS05 114 aa3.92□□□□□ -1.78
SBDSP1-204ENST00000453858 OOEPA6NGQ2 149 aa3.92□□□□□ -1.78
SBDSP1-204ENST00000453858 LGALS9O00182 355 aa3.92□□□□□ -1.78
SBDSP1-204ENST00000453858 FAAHO00519 579 aa3.92□□□□□ -1.78
SBDSP1-204ENST00000453858 SOCS2O14508 198 aa3.92□□□□□ -1.78
SBDSP1-204ENST00000453858 IMPA2O14732 288 aa3.92□□□□□ -1.78
SBDSP1-204ENST00000453858 TSPAN4O14817 238 aa3.92□□□□□ -1.78
SBDSP1-204ENST00000453858 SCN2BO60939 215 aa3.92□□□□□ -1.78
SBDSP1-204ENST00000453858 SAP30O75446 220 aa3.92□□□□□ -1.78
SBDSP1-204ENST00000453858 PTBP3O95758 552 aaKnown RBP3.92□□□□□ -1.78
SBDSP1-204ENST00000453858 HMGN2P05204 90 aaKnown RBP3.92□□□□□ -1.78
SBDSP1-204ENST00000453858 INHBAP08476 426 aa3.92□□□□□ -1.78
SBDSP1-204ENST00000453858 SPARCP09486 303 aa3.92□□□□□ -1.78
SBDSP1-204ENST00000453858 AZGP1P25311 298 aaKnown RBP3.92□□□□□ -1.78
SBDSP1-204ENST00000453858 APLNRP35414 380 aa3.92□□□□□ -1.78
SBDSP1-204ENST00000453858 FRKP42685 505 aaPredicted RBP3.92□□□□□ -1.78
SBDSP1-204ENST00000453858 ENTPD1P49961 510 aa3.92□□□□□ -1.78
SBDSP1-204ENST00000453858 RASSF2P50749 326 aa3.92□□□□□ -1.78
SBDSP1-204ENST00000453858 ATP6V0D1P61421 351 aa3.92□□□□□ -1.78
SBDSP1-204ENST00000453858 C2orf80Q0P641 193 aa3.92□□□□□ -1.78
SBDSP1-204ENST00000453858 DLG1Q12959 904 aa3.92□□□□□ -1.78
SBDSP1-204ENST00000453858 BNIP2Q12982 314 aa3.92□□□□□ -1.78
SBDSP1-204ENST00000453858 HSPB3Q12988 150 aa3.92□□□□□ -1.78
SBDSP1-204ENST00000453858 GTF2H2Q13888 395 aa3.92□□□□□ -1.78
SBDSP1-204ENST00000453858 KIAA0141Q14154 515 aaPredicted RBP3.92□□□□□ -1.78
SBDSP1-204ENST00000453858 RNASEH2BQ5TBB1 312 aaKnown RBP3.92□□□□□ -1.78
SBDSP1-204ENST00000453858 HHATQ5VTY9 493 aa3.92□□□□□ -1.78
SBDSP1-204ENST00000453858 C1orf140Q5VVS0 124 aa3.92□□□□□ -1.78
SBDSP1-204ENST00000453858 TTC19Q6DKK2 380 aaPredicted RBP3.92□□□□□ -1.78
SBDSP1-204ENST00000453858 GTF2H2CQ6P1K8 395 aa3.92□□□□□ -1.78
SBDSP1-204ENST00000453858 UNQ6126/PRO20091Q6UXV3 157 aa3.92□□□□□ -1.78
SBDSP1-204ENST00000453858 OLIG3Q7RTU3 272 aa3.92□□□□□ -1.78
SBDSP1-204ENST00000453858 C16orf82Q7Z2V1 217 aa3.92□□□□□ -1.78
SBDSP1-204ENST00000453858 PATL1Q86TB9 770 aaKnown RBP3.92□□□□□ -1.78
SBDSP1-204ENST00000453858 MKXQ8IYA7 352 aa3.92□□□□□ -1.78
SBDSP1-204ENST00000453858 COMMD1Q8N668 190 aa3.92□□□□□ -1.78
SBDSP1-204ENST00000453858 DRAM1Q8N682 238 aa3.92□□□□□ -1.78
SBDSP1-204ENST00000453858 TMEM217Q8N7C4 229 aa3.92□□□□□ -1.78
SBDSP1-204ENST00000453858 SETD9Q8NE22 299 aa3.92□□□□□ -1.78
SBDSP1-204ENST00000453858 OR11H1Q8NG94 326 aa3.92□□□□□ -1.78
SBDSP1-204ENST00000453858 OR4K5Q8NGD3 323 aa3.92□□□□□ -1.78
SBDSP1-204ENST00000453858 OR5D13Q8NGL4 314 aa3.92□□□□□ -1.78
SBDSP1-204ENST00000453858 OR13G1Q8NGZ3 307 aa3.92□□□□□ -1.78
SBDSP1-204ENST00000453858 MFSD8Q8NHS3 518 aa3.92□□□□□ -1.78
SBDSP1-204ENST00000453858 DCAKDQ8WVC6 231 aa3.92□□□□□ -1.78
SBDSP1-204ENST00000453858 FRZBQ92765 325 aa3.92□□□□□ -1.78
SBDSP1-204ENST00000453858 TMEM54Q969K7 222 aa3.92□□□□□ -1.78
SBDSP1-204ENST00000453858 ERGIC1Q969X5 290 aa3.92□□□□□ -1.78
SBDSP1-204ENST00000453858 C4orf45Q96LM5 186 aa3.92□□□□□ -1.78
SBDSP1-204ENST00000453858 CHP1Q99653 195 aa3.92□□□□□ -1.78
SBDSP1-204ENST00000453858 FUZQ9BT04 418 aa3.92□□□□□ -1.78
SBDSP1-204ENST00000453858 ULBP2Q9BZM5 246 aa3.92□□□□□ -1.78
SBDSP1-204ENST00000453858 TUBA4BQ9H853 241 aa3.92□□□□□ -1.78
SBDSP1-204ENST00000453858 NOL11Q9H8H0 719 aaKnown RBP3.92□□□□□ -1.78
SBDSP1-204ENST00000453858 EXOSC3Q9NQT5 275 aaKnown RBP3.92□□□□□ -1.78
SBDSP1-204ENST00000453858 TFR2Q9UP52 801 aa3.92□□□□□ -1.78
SBDSP1-204ENST00000453858 TRAV38-1A0A0B4J264 116 aa3.91□□□□□ -1.78
SBDSP1-204ENST00000453858 A0A1W2PRQ8 180 aa3.91□□□□□ -1.78
SBDSP1-204ENST00000453858 MSGN1A6NI15 193 aa3.91□□□□□ -1.78
SBDSP1-204ENST00000453858 CLDN24A6NM45 220 aa3.91□□□□□ -1.78
SBDSP1-204ENST00000453858 A8MVM7 634 aa3.91□□□□□ -1.78
SBDSP1-204ENST00000453858 TEX22C9J3V5 150 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms