RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 PRPS1L1P21108 318 aa3.04□□□□□ -1.92
HMGB3P6-201ENST00000444896 HOXA9P31269 272 aa3.04□□□□□ -1.92
HMGB3P6-201ENST00000444896 CCR7P32248 378 aa3.04□□□□□ -1.92
HMGB3P6-201ENST00000444896 RBMXP38159 391 aaKnown RBP3.04□□□□□ -1.92
HMGB3P6-201ENST00000444896 PRLHRP49683 370 aa3.04□□□□□ -1.92
HMGB3P6-201ENST00000444896 HLCSP50747 726 aa3.04□□□□□ -1.92
HMGB3P6-201ENST00000444896 GABARAPL2P60520 117 aa3.04□□□□□ -1.92
HMGB3P6-201ENST00000444896 IRF8Q02556 426 aa3.04□□□□□ -1.92
HMGB3P6-201ENST00000444896 ELP6Q0PNE2 266 aa3.04□□□□□ -1.92
HMGB3P6-201ENST00000444896 CHIT1Q13231 466 aa3.04□□□□□ -1.92
HMGB3P6-201ENST00000444896 SELPLGQ14242 412 aa3.04□□□□□ -1.92
HMGB3P6-201ENST00000444896 GK3PQ14409 553 aa3.04□□□□□ -1.92
HMGB3P6-201ENST00000444896 ZNF77Q15935 545 aa3.04□□□□□ -1.92
HMGB3P6-201ENST00000444896 SYPL1Q16563 259 aa3.04□□□□□ -1.92
HMGB3P6-201ENST00000444896 ZBED5Q49AG3 693 aa3.04□□□□□ -1.92
HMGB3P6-201ENST00000444896 LRRC23Q53EV4 343 aaPredicted RBP3.04□□□□□ -1.92
HMGB3P6-201ENST00000444896 C2orf83Q53S99 150 aa3.04□□□□□ -1.92
HMGB3P6-201ENST00000444896 SPIN4Q56A73 249 aa3.04□□□□□ -1.92
HMGB3P6-201ENST00000444896 RBM48Q5RL73 367 aaKnown RBP3.04□□□□□ -1.92
HMGB3P6-201ENST00000444896 ANXA8L1Q5VT79 327 aa3.04□□□□□ -1.92
HMGB3P6-201ENST00000444896 ZNF773Q6PK81 442 aa3.04□□□□□ -1.92
HMGB3P6-201ENST00000444896 UNQ9370/PRO34162Q6UXP9 181 aa3.04□□□□□ -1.92
HMGB3P6-201ENST00000444896 MBOAT1Q6ZNC8 495 aa3.04□□□□□ -1.92
HMGB3P6-201ENST00000444896 HORMAD1Q86X24 394 aa3.04□□□□□ -1.92
HMGB3P6-201ENST00000444896 RALGPS2Q86X27 583 aaPredicted RBP3.04□□□□□ -1.92
HMGB3P6-201ENST00000444896 CLVS1Q8IUQ0 354 aaPredicted RBP3.04□□□□□ -1.92
HMGB3P6-201ENST00000444896 RIMKLAQ8IXN7 391 aa3.04□□□□□ -1.92
HMGB3P6-201ENST00000444896 C8orf59Q8N0T1 100 aaPredicted RBP3.04□□□□□ -1.92
HMGB3P6-201ENST00000444896 ZCCHC7Q8N3Z6 543 aaKnown RBP3.04□□□□□ -1.92
HMGB3P6-201ENST00000444896 KRTCAP2Q8N6L1 136 aa3.04□□□□□ -1.92
HMGB3P6-201ENST00000444896 CCDC71LQ8N9Z2 235 aa3.04□□□□□ -1.92
HMGB3P6-201ENST00000444896 OR5K1Q8NHB7 308 aa3.04□□□□□ -1.92
HMGB3P6-201ENST00000444896 CLHC1Q8NHS4 586 aa3.04□□□□□ -1.92
HMGB3P6-201ENST00000444896 CDC26Q8NHZ8 85 aa3.04□□□□□ -1.92
HMGB3P6-201ENST00000444896 ZNF420Q8TAQ5 688 aaPredicted RBP3.04□□□□□ -1.92
HMGB3P6-201ENST00000444896 GTF2H4Q92759 462 aa3.04□□□□□ -1.92
HMGB3P6-201ENST00000444896 TMBIM1Q969X1 311 aa3.04□□□□□ -1.92
HMGB3P6-201ENST00000444896 AURKBQ96GD4 344 aaPredicted RBP3.04□□□□□ -1.92
HMGB3P6-201ENST00000444896 FCRL1Q96LA6 429 aa3.04□□□□□ -1.92
HMGB3P6-201ENST00000444896 TSSK3Q96PN8 268 aa3.04□□□□□ -1.92
HMGB3P6-201ENST00000444896 OR52E6Q96RD3 313 aa3.04□□□□□ -1.92
HMGB3P6-201ENST00000444896 RHBGQ9H310 441 aa3.04□□□□□ -1.92
HMGB3P6-201ENST00000444896 C11orf49Q9H6J7 331 aa3.04□□□□□ -1.92
HMGB3P6-201ENST00000444896 DDX18Q9NVP1 670 aaKnown RBP3.04□□□□□ -1.92
HMGB3P6-201ENST00000444896 USE1Q9NZ43 259 aa3.04□□□□□ -1.92
HMGB3P6-201ENST00000444896 VAPAQ9P0L0 249 aa3.04□□□□□ -1.92
HMGB3P6-201ENST00000444896 ZNF282Q9UDV7 671 aaPredicted RBP3.04□□□□□ -1.92
HMGB3P6-201ENST00000444896 WARS2Q9UGM6 360 aaKnown RBP3.04□□□□□ -1.92
HMGB3P6-201ENST00000444896 CD84Q9UIB8 345 aa3.04□□□□□ -1.92
HMGB3P6-201ENST00000444896 PLXNA2O75051 1894 aa3.04□□□□□ -1.92
HMGB3P6-201ENST00000444896 HTTP42858 3142 aa3.04□□□□□ -1.92
HMGB3P6-201ENST00000444896 ZFC3H1O60293 1989 aaKnown RBP3.03□□□□□ -1.92
HMGB3P6-201ENST00000444896 PLXNB3Q9ULL4 1909 aa3.03□□□□□ -1.92
HMGB3P6-201ENST00000444896 KCNE1BA0A087WTH5 132 aa3.03□□□□□ -1.92
HMGB3P6-201ENST00000444896 A0A0G2JRQ6 117 aa3.03□□□□□ -1.92
HMGB3P6-201ENST00000444896 A0A1W2PNV4 684 aa3.03□□□□□ -1.92
HMGB3P6-201ENST00000444896 WI2-2373I1.2A0A1W2PRP0 233 aa3.03□□□□□ -1.92
HMGB3P6-201ENST00000444896 MGAT4DA6NG13 374 aa3.03□□□□□ -1.92
HMGB3P6-201ENST00000444896 E7EQ34 232 aa3.03□□□□□ -1.92
HMGB3P6-201ENST00000444896 G3V4G9 280 aa3.03□□□□□ -1.92
HMGB3P6-201ENST00000444896 H0YIV9 168 aa3.03□□□□□ -1.92
HMGB3P6-201ENST00000444896 H3BSA7 217 aa3.03□□□□□ -1.92
HMGB3P6-201ENST00000444896 GFYI3L273 518 aa3.03□□□□□ -1.92
HMGB3P6-201ENST00000444896 KPNA3O00505 521 aaPredicted RBP3.03□□□□□ -1.92
HMGB3P6-201ENST00000444896 DLGAP1O14490 977 aa3.03□□□□□ -1.92
HMGB3P6-201ENST00000444896 BCKDKO14874 412 aa3.03□□□□□ -1.92
HMGB3P6-201ENST00000444896 SCAMP2O15127 329 aaKnown RBP3.03□□□□□ -1.92
HMGB3P6-201ENST00000444896 ZNF861PO60384 105 aa3.03□□□□□ -1.92
HMGB3P6-201ENST00000444896 UGT2B11O75310 529 aa3.03□□□□□ -1.92
HMGB3P6-201ENST00000444896 BCAS1O75363 584 aaPredicted RBP3.03□□□□□ -1.92
HMGB3P6-201ENST00000444896 PSIP1O75475 530 aaKnown RBP3.03□□□□□ -1.92
HMGB3P6-201ENST00000444896 MMP23AO75900 390 aa3.03□□□□□ -1.92
HMGB3P6-201ENST00000444896 CPSF4O95639 269 aaKnown RBP3.03□□□□□ -1.92
HMGB3P6-201ENST00000444896 SNAP29O95721 258 aa3.03□□□□□ -1.92
HMGB3P6-201ENST00000444896 ZNF682O95780 498 aa3.03□□□□□ -1.92
HMGB3P6-201ENST00000444896 SERPINA1P01009 418 aa3.03□□□□□ -1.92
HMGB3P6-201ENST00000444896 RPN2P04844 631 aa3.03□□□□□ -1.92
HMGB3P6-201ENST00000444896 PCCBP05166 539 aa3.03□□□□□ -1.92
HMGB3P6-201ENST00000444896 FABP3P05413 133 aa3.03□□□□□ -1.92
HMGB3P6-201ENST00000444896 NELFEP18615 380 aaKnown RBP3.03□□□□□ -1.92
HMGB3P6-201ENST00000444896 UQCRC2P22695 453 aa3.03□□□□□ -1.92
HMGB3P6-201ENST00000444896 NTSP30990 170 aa3.03□□□□□ -1.92
HMGB3P6-201ENST00000444896 CA5AP35218 305 aa3.03□□□□□ -1.92
HMGB3P6-201ENST00000444896 MAGEA2P43356 314 aa3.03□□□□□ -1.92
HMGB3P6-201ENST00000444896 ADARB1P78563 741 aaKnown RBP3.03□□□□□ -1.92
HMGB3P6-201ENST00000444896 SEMG2Q02383 582 aa3.03□□□□□ -1.92
HMGB3P6-201ENST00000444896 SNTB2Q13425 540 aaKnown RBP3.03□□□□□ -1.92
HMGB3P6-201ENST00000444896 DDX39BQ13838 428 aaKnown RBP3.03□□□□□ -1.92
HMGB3P6-201ENST00000444896 PON2Q15165 354 aa3.03□□□□□ -1.92
HMGB3P6-201ENST00000444896 BCL7AQ4VC05 210 aa3.03□□□□□ -1.92
HMGB3P6-201ENST00000444896 HENMT1Q5T8I9 393 aaKnown RBP3.03□□□□□ -1.92
HMGB3P6-201ENST00000444896 NOXRED1Q6NXP6 359 aa3.03□□□□□ -1.92
HMGB3P6-201ENST00000444896 WDR74Q6RFH5 385 aaPredicted RBP3.03□□□□□ -1.92
HMGB3P6-201ENST00000444896 AGTRAPQ6RW13 159 aa3.03□□□□□ -1.92
HMGB3P6-201ENST00000444896 SPESP1Q6UW49 350 aa3.03□□□□□ -1.92
HMGB3P6-201ENST00000444896 ENPP6Q6UWR7 440 aa3.03□□□□□ -1.92
HMGB3P6-201ENST00000444896 FAM220AQ7Z4H9 259 aa3.03□□□□□ -1.92
HMGB3P6-201ENST00000444896 TMCO2Q7Z6W1 182 aaPredicted RBP3.03□□□□□ -1.92
HMGB3P6-201ENST00000444896 THOC6Q86W42 341 aaKnown RBP3.03□□□□□ -1.92
HMGB3P6-201ENST00000444896 CALHM3Q86XJ0 350 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms