RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 NRASP01111 189 aa10.9□□□□□ -0.67
UBR4-205ENST00000417040 FAM157BP0CG42 384 aa10.9□□□□□ -0.67
UBR4-205ENST00000417040 OR5H8P0DN80 308 aa10.9□□□□□ -0.67
UBR4-205ENST00000417040 CD46P15529 392 aa10.9□□□□□ -0.67
UBR4-205ENST00000417040 CALCRP30988 508 aa10.9□□□□□ -0.67
UBR4-205ENST00000417040 ACVR1Q04771 509 aa10.9□□□□□ -0.67
UBR4-205ENST00000417040 CA13Q8N1Q1 262 aa10.9□□□□□ -0.67
UBR4-205ENST00000417040 VAMP8Q9BV40 100 aa10.9□□□□□ -0.67
UBR4-205ENST00000417040 FGF22Q9HCT0 170 aa10.9□□□□□ -0.67
UBR4-205ENST00000417040 TNFRSF4P43489 277 aa10.89□□□□□ -0.67
UBR4-205ENST00000417040 HNRNPA3P51991 378 aaKnown RBP10.89□□□□□ -0.67
UBR4-205ENST00000417040 RAE1P78406 368 aaKnown RBP10.89□□□□□ -0.67
UBR4-205ENST00000417040 SPINK9Q5DT21 86 aa10.89□□□□□ -0.67
UBR4-205ENST00000417040 PLPPR2Q96GM1 343 aa10.89□□□□□ -0.67
UBR4-205ENST00000417040 RBM38Q9H0Z9 239 aaKnown RBP10.89□□□□□ -0.67
UBR4-205ENST00000417040 MMP26Q9NRE1 261 aa10.89□□□□□ -0.67
UBR4-205ENST00000417040 ARPC3O15145 178 aa10.89□□□□□ -0.67
UBR4-205ENST00000417040 ENDOGQ14249 297 aaKnown RBP10.89□□□□□ -0.67
UBR4-205ENST00000417040 LHFPL2Q6ZUX7 228 aa10.89□□□□□ -0.67
UBR4-205ENST00000417040 SLC37A2Q8TED4 501 aa10.89□□□□□ -0.67
UBR4-205ENST00000417040 FGF21Q9NSA1 209 aa10.89□□□□□ -0.67
UBR4-205ENST00000417040 NRXN3Q9Y4C0 1643 aa10.89□□□□□ -0.67
UBR4-205ENST00000417040 DSCR3O14972 297 aa10.89□□□□□ -0.67
UBR4-205ENST00000417040 DUSP2Q05923 314 aa10.89□□□□□ -0.67
UBR4-205ENST00000417040 ACOT6Q3I5F7 207 aaPredicted RBP10.89□□□□□ -0.67
UBR4-205ENST00000417040 ETFBKMTQ8IXQ9 262 aa10.89□□□□□ -0.67
UBR4-205ENST00000417040 MAML2Q8IZL2 1156 aaPredicted RBP10.89□□□□□ -0.67
UBR4-205ENST00000417040 SLC38A6Q8IZM9 456 aa10.89□□□□□ -0.67
UBR4-205ENST00000417040 ARIH2OSQ8N7S6 290 aa10.89□□□□□ -0.67
UBR4-205ENST00000417040 ZNF485Q8NCK3 441 aa10.89□□□□□ -0.67
UBR4-205ENST00000417040 OR2G2Q8NGZ5 317 aa10.89□□□□□ -0.67
UBR4-205ENST00000417040 EPHX3Q9H6B9 360 aa10.89□□□□□ -0.67
UBR4-205ENST00000417040 DUSP22Q9NRW4 184 aa10.89□□□□□ -0.67
UBR4-205ENST00000417040 ALOX12BO75342 701 aa10.89□□□□□ -0.67
UBR4-205ENST00000417040 DTYMKP23919 212 aa10.89□□□□□ -0.67
UBR4-205ENST00000417040 GALR1P47211 349 aa10.89□□□□□ -0.67
UBR4-205ENST00000417040 FGF8P55075 233 aaPredicted RBP10.89□□□□□ -0.67
UBR4-205ENST00000417040 PCK2Q16822 640 aa10.89□□□□□ -0.67
UBR4-205ENST00000417040 RTN4RL1Q86UN2 441 aaPredicted RBP10.89□□□□□ -0.67
UBR4-205ENST00000417040 S1PR5Q9H228 398 aa10.89□□□□□ -0.67
UBR4-205ENST00000417040 RIMS4Q9H426 269 aaPredicted RBP10.89□□□□□ -0.67
UBR4-205ENST00000417040 KCNIP2Q9NS61 270 aa10.89□□□□□ -0.67
UBR4-205ENST00000417040 GPR31O00270 319 aa10.89□□□□□ -0.67
UBR4-205ENST00000417040 TBXA2RP21731 343 aa10.89□□□□□ -0.67
UBR4-205ENST00000417040 C9orf152Q5JTZ5 239 aa10.89□□□□□ -0.67
UBR4-205ENST00000417040 DRAM2Q6UX65 266 aa10.89□□□□□ -0.67
UBR4-205ENST00000417040 ZNF66Q6ZN08 573 aa10.89□□□□□ -0.67
UBR4-205ENST00000417040 SHROOM3Q8TF72 1996 aa10.88□□□□□ -0.67
UBR4-205ENST00000417040 APOBEC1P41238 236 aaKnown RBP10.88□□□□□ -0.67
UBR4-205ENST00000417040 TPPP2P59282 170 aa10.88□□□□□ -0.67
UBR4-205ENST00000417040 TPBGQ13641 420 aa10.88□□□□□ -0.67
UBR4-205ENST00000417040 RAB35Q15286 201 aa10.88□□□□□ -0.67
UBR4-205ENST00000417040 ETFDHQ16134 617 aa10.88□□□□□ -0.67
UBR4-205ENST00000417040 C12orf73Q69YU5 71 aa10.88□□□□□ -0.67
UBR4-205ENST00000417040 TRILQ7L0X0 811 aa10.88□□□□□ -0.67
UBR4-205ENST00000417040 ADGRG3Q86Y34 549 aa10.88□□□□□ -0.67
UBR4-205ENST00000417040 ZNF687Q8N1G0 1237 aa10.88□□□□□ -0.67
UBR4-205ENST00000417040 TWSG1Q9GZX9 223 aa10.88□□□□□ -0.67
UBR4-205ENST00000417040 PLEKHA2Q9HB19 425 aa10.88□□□□□ -0.67
UBR4-205ENST00000417040 ZMAT5Q9UDW3 170 aaKnown RBP10.88□□□□□ -0.67
UBR4-205ENST00000417040 XKRY2A2RUG3 117 aa10.88□□□□□ -0.67
UBR4-205ENST00000417040 PIAS2O75928 621 aa10.88□□□□□ -0.67
UBR4-205ENST00000417040 ZNF17P17021 662 aa10.88□□□□□ -0.67
UBR4-205ENST00000417040 CCL11P51671 97 aa10.88□□□□□ -0.67
UBR4-205ENST00000417040 LIMK1P53667 647 aa10.88□□□□□ -0.67
UBR4-205ENST00000417040 ERVFC1-1P60608 527 aa10.88□□□□□ -0.67
UBR4-205ENST00000417040 C16orf52Q8NHV5 167 aa10.88□□□□□ -0.67
UBR4-205ENST00000417040 ISOC2Q96AB3 205 aa10.88□□□□□ -0.67
UBR4-205ENST00000417040 CCDC74BQ96LY2 380 aa10.88□□□□□ -0.67
UBR4-205ENST00000417040 MEIKINA0A087WXM9 373 aa10.88□□□□□ -0.67
UBR4-205ENST00000417040 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.88□□□□□ -0.67
UBR4-205ENST00000417040 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.88□□□□□ -0.67
UBR4-205ENST00000417040 M0R135 149 aa10.88□□□□□ -0.67
UBR4-205ENST00000417040 PPM1DO15297 605 aa10.88□□□□□ -0.67
UBR4-205ENST00000417040 GPR37O15354 613 aa10.88□□□□□ -0.67
UBR4-205ENST00000417040 EIF1BO60739 113 aaKnown RBP10.88□□□□□ -0.67
UBR4-205ENST00000417040 IGF2P01344 180 aa10.88□□□□□ -0.67
UBR4-205ENST00000417040 DAOP14920 347 aa10.88□□□□□ -0.67
UBR4-205ENST00000417040 POU3F3P20264 500 aaPredicted RBP10.88□□□□□ -0.67
UBR4-205ENST00000417040 RAB5AP20339 215 aa10.88□□□□□ -0.67
UBR4-205ENST00000417040 HAAOP46952 286 aa10.88□□□□□ -0.67
UBR4-205ENST00000417040 GPR12P47775 334 aa10.88□□□□□ -0.67
UBR4-205ENST00000417040 ERVS71-1P61550 626 aa10.88□□□□□ -0.67
UBR4-205ENST00000417040 RUNX2Q13950 521 aa10.88□□□□□ -0.67
UBR4-205ENST00000417040 KIRREL2Q6UWL6 708 aa10.88□□□□□ -0.67
UBR4-205ENST00000417040 GPX8Q8TED1 209 aa10.88□□□□□ -0.67
UBR4-205ENST00000417040 ZNF799Q96GE5 643 aa10.88□□□□□ -0.67
UBR4-205ENST00000417040 DUSP23Q9BVJ7 150 aa10.88□□□□□ -0.67
UBR4-205ENST00000417040 NUDT9Q9BW91 350 aa10.88□□□□□ -0.67
UBR4-205ENST00000417040 OBP2AQ9NY56 170 aa10.88□□□□□ -0.67
UBR4-205ENST00000417040 OR51B4Q9Y5P0 310 aa10.88□□□□□ -0.67
UBR4-205ENST00000417040 TOPAZ1Q8N9V7 1692 aa10.88□□□□□ -0.67
UBR4-205ENST00000417040 TRAV1-2A0A0B4J238 106 aa10.88□□□□□ -0.67
UBR4-205ENST00000417040 TUBAL3A6NHL2 446 aa10.88□□□□□ -0.67
UBR4-205ENST00000417040 NTN1O95631 604 aa10.88□□□□□ -0.67
UBR4-205ENST00000417040 F2RP25116 425 aa10.88□□□□□ -0.67
UBR4-205ENST00000417040 PMS2P11Q13670 270 aa10.88□□□□□ -0.67
UBR4-205ENST00000417040 DCAF12Q5T6F0 453 aa10.88□□□□□ -0.67
UBR4-205ENST00000417040 CBLN2Q8IUK8 224 aa10.88□□□□□ -0.67
UBR4-205ENST00000417040 PLPP6Q8IY26 295 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms