RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 ADAP2Q9NPF8 381 aa3.49□□□□□ -1.85
HMGB3P18-201ENST00000406327 BATF3Q9NR55 127 aa3.49□□□□□ -1.85
HMGB3P18-201ENST00000406327 LYARQ9NX58 379 aaKnown RBP3.49□□□□□ -1.85
HMGB3P18-201ENST00000406327 Q9UF83 564 aa3.49□□□□□ -1.85
HMGB3P18-201ENST00000406327 MMP17Q9ULZ9 603 aa3.49□□□□□ -1.85
HMGB3P18-201ENST00000406327 ARL5AQ9Y689 179 aa3.49□□□□□ -1.85
HMGB3P18-201ENST00000406327 GOLGA8QA0A0J9YX86 632 aa3.48□□□□□ -1.85
HMGB3P18-201ENST00000406327 NCF1BA6NI72 391 aaPredicted RBP3.48□□□□□ -1.85
HMGB3P18-201ENST00000406327 OR2AG2A6NM03 316 aa3.48□□□□□ -1.85
HMGB3P18-201ENST00000406327 A8MT66 165 aa3.48□□□□□ -1.85
HMGB3P18-201ENST00000406327 C12orf71A8MTZ7 269 aa3.48□□□□□ -1.85
HMGB3P18-201ENST00000406327 NCF1CA8MVU1 366 aaPredicted RBP3.48□□□□□ -1.85
HMGB3P18-201ENST00000406327 CCL22O00626 93 aa3.48□□□□□ -1.85
HMGB3P18-201ENST00000406327 NVLO15381 856 aaKnown RBP3.48□□□□□ -1.85
HMGB3P18-201ENST00000406327 FKBP6O75344 327 aa3.48□□□□□ -1.85
HMGB3P18-201ENST00000406327 ZMPSTE24O75844 475 aa3.48□□□□□ -1.85
HMGB3P18-201ENST00000406327 OR2F2O95006 317 aa3.48□□□□□ -1.85
HMGB3P18-201ENST00000406327 CD160O95971 181 aa3.48□□□□□ -1.85
HMGB3P18-201ENST00000406327 IGHV2-5P01817 119 aa3.48□□□□□ -1.85
HMGB3P18-201ENST00000406327 CD1EP15812 388 aa3.48□□□□□ -1.85
HMGB3P18-201ENST00000406327 HMGA1P17096 107 aaKnown RBP3.48□□□□□ -1.85
HMGB3P18-201ENST00000406327 OGNP20774 298 aaKnown RBP3.48□□□□□ -1.85
HMGB3P18-201ENST00000406327 RORAP35398 523 aa3.48□□□□□ -1.85
HMGB3P18-201ENST00000406327 NAA10P41227 235 aaPredicted RBP3.48□□□□□ -1.85
HMGB3P18-201ENST00000406327 RGRP47804 291 aa3.48□□□□□ -1.85
HMGB3P18-201ENST00000406327 CCL23P55773 120 aa3.48□□□□□ -1.85
HMGB3P18-201ENST00000406327 RPS24P62847 133 aaKnown RBP3.48□□□□□ -1.85
HMGB3P18-201ENST00000406327 TAF1AQ15573 450 aaPredicted RBP3.48□□□□□ -1.85
HMGB3P18-201ENST00000406327 FAM45BPQ6NSW5 357 aa3.48□□□□□ -1.85
HMGB3P18-201ENST00000406327 TMCO2Q7Z6W1 182 aaPredicted RBP3.48□□□□□ -1.85
HMGB3P18-201ENST00000406327 DEFB107AQ8IZN7 70 aa3.48□□□□□ -1.85
HMGB3P18-201ENST00000406327 GABRG1Q8N1C3 465 aa3.48□□□□□ -1.85
HMGB3P18-201ENST00000406327 LIX1Q8N485 282 aa3.48□□□□□ -1.85
HMGB3P18-201ENST00000406327 ZNF557Q8N988 423 aaPredicted RBP3.48□□□□□ -1.85
HMGB3P18-201ENST00000406327 BPIFCQ8NFQ6 507 aa3.48□□□□□ -1.85
HMGB3P18-201ENST00000406327 OR6C4Q8NGE1 309 aa3.48□□□□□ -1.85
HMGB3P18-201ENST00000406327 OR4A4PQ8NGN8 299 aa3.48□□□□□ -1.85
HMGB3P18-201ENST00000406327 OR13C4Q8NGS5 318 aa3.48□□□□□ -1.85
HMGB3P18-201ENST00000406327 FAM45AQ8TCE6 357 aa3.48□□□□□ -1.85
HMGB3P18-201ENST00000406327 DTX3LQ8TDB6 740 aa3.48□□□□□ -1.85
HMGB3P18-201ENST00000406327 BLOC1S5Q8TDH9 187 aa3.48□□□□□ -1.85
HMGB3P18-201ENST00000406327 L3HYPDHQ96EM0 354 aa3.48□□□□□ -1.85
HMGB3P18-201ENST00000406327 DNAJC1Q96KC8 554 aaKnown RBP3.48□□□□□ -1.85
HMGB3P18-201ENST00000406327 MS4A4EQ96PG1 132 aa3.48□□□□□ -1.85
HMGB3P18-201ENST00000406327 SHCBP1LQ9BZQ2 653 aa3.48□□□□□ -1.85
HMGB3P18-201ENST00000406327 CWH43Q9H720 699 aa3.48□□□□□ -1.85
HMGB3P18-201ENST00000406327 EFCAB1Q9HAE3 211 aa3.48□□□□□ -1.85
HMGB3P18-201ENST00000406327 POPDC3Q9HBV1 291 aa3.48□□□□□ -1.85
HMGB3P18-201ENST00000406327 EML4Q9HC35 981 aaKnown RBP3.48□□□□□ -1.85
HMGB3P18-201ENST00000406327 NLE1Q9NVX2 485 aaPredicted RBP3.48□□□□□ -1.85
HMGB3P18-201ENST00000406327 GNPTGQ9UJJ9 305 aa3.48□□□□□ -1.85
HMGB3P18-201ENST00000406327 STOML2Q9UJZ1 356 aa3.48□□□□□ -1.85
HMGB3P18-201ENST00000406327 POMPQ9Y244 141 aa3.48□□□□□ -1.85
HMGB3P18-201ENST00000406327 FRMPD3Q5JV73 1810 aa3.48□□□□□ -1.85
HMGB3P18-201ENST00000406327 MGAMO43451 1857 aa3.47□□□□□ -1.85
HMGB3P18-201ENST00000406327 SCN10AQ9Y5Y9 1956 aa3.47□□□□□ -1.85
HMGB3P18-201ENST00000406327 TSC2P49815 1807 aa3.47□□□□□ -1.85
HMGB3P18-201ENST00000406327 SIRPB1O00241 398 aa3.47□□□□□ -1.85
HMGB3P18-201ENST00000406327 CDC7O00311 574 aa3.47□□□□□ -1.85
HMGB3P18-201ENST00000406327 UBFD1O14562 309 aaKnown RBP3.47□□□□□ -1.85
HMGB3P18-201ENST00000406327 LIN7AO14910 233 aaPredicted RBP3.47□□□□□ -1.85
HMGB3P18-201ENST00000406327 DNAJB6O75190 326 aa3.47□□□□□ -1.85
HMGB3P18-201ENST00000406327 SMIM24O75264 130 aa3.47□□□□□ -1.85
HMGB3P18-201ENST00000406327 SUPT7LO94864 414 aa3.47□□□□□ -1.85
HMGB3P18-201ENST00000406327 RHOCP08134 193 aa3.47□□□□□ -1.85
HMGB3P18-201ENST00000406327 GIG44P09565 113 aaPredicted RBP3.47□□□□□ -1.85
HMGB3P18-201ENST00000406327 PIRTP0C851 137 aa3.47□□□□□ -1.85
HMGB3P18-201ENST00000406327 STAG3L3P0CL85 134 aa3.47□□□□□ -1.85
HMGB3P18-201ENST00000406327 HPGDP15428 266 aa3.47□□□□□ -1.85
HMGB3P18-201ENST00000406327 CD9P21926 228 aa3.47□□□□□ -1.85
HMGB3P18-201ENST00000406327 HMOX2P30519 316 aa3.47□□□□□ -1.85
HMGB3P18-201ENST00000406327 VDAC2P45880 294 aaPredicted RBP3.47□□□□□ -1.85
HMGB3P18-201ENST00000406327 NUDT2P50583 147 aa3.47□□□□□ -1.85
HMGB3P18-201ENST00000406327 SSR4P51571 173 aa3.47□□□□□ -1.85
HMGB3P18-201ENST00000406327 CCNHP51946 323 aaPredicted RBP3.47□□□□□ -1.85
HMGB3P18-201ENST00000406327 ZNF140P52738 457 aaPredicted RBP3.47□□□□□ -1.85
HMGB3P18-201ENST00000406327 STC1P52823 247 aa3.47□□□□□ -1.85
HMGB3P18-201ENST00000406327 STX5Q13190 355 aa3.47□□□□□ -1.85
HMGB3P18-201ENST00000406327 ART3Q13508 389 aa3.47□□□□□ -1.85
HMGB3P18-201ENST00000406327 OR4D1Q15615 310 aa3.47□□□□□ -1.85
HMGB3P18-201ENST00000406327 NSDHLQ15738 373 aa3.47□□□□□ -1.85
HMGB3P18-201ENST00000406327 PIGGQ5H8A4 983 aa3.47□□□□□ -1.85
HMGB3P18-201ENST00000406327 ZNF678Q5SXM1 525 aa3.47□□□□□ -1.85
HMGB3P18-201ENST00000406327 GPR157Q5UAW9 335 aa3.47□□□□□ -1.85
HMGB3P18-201ENST00000406327 ANGPTL8Q6UXH0 198 aa3.47□□□□□ -1.85
HMGB3P18-201ENST00000406327 RPS27LQ71UM5 84 aaKnown RBP3.47□□□□□ -1.85
HMGB3P18-201ENST00000406327 SLC16A14Q7RTX9 510 aa3.47□□□□□ -1.85
HMGB3P18-201ENST00000406327 DEFB128Q7Z7B8 93 aa3.47□□□□□ -1.85
HMGB3P18-201ENST00000406327 TMEM150AQ86TG1 271 aa3.47□□□□□ -1.85
HMGB3P18-201ENST00000406327 PIANPQ8IYJ0 282 aa3.47□□□□□ -1.85
HMGB3P18-201ENST00000406327 MICU2Q8IYU8 434 aa3.47□□□□□ -1.85
HMGB3P18-201ENST00000406327 PGAM4Q8N0Y7 254 aa3.47□□□□□ -1.85
HMGB3P18-201ENST00000406327 EID2Q8N6I1 236 aa3.47□□□□□ -1.85
HMGB3P18-201ENST00000406327 OR4K2Q8NGD2 314 aa3.47□□□□□ -1.85
HMGB3P18-201ENST00000406327 OR9G1Q8NH87 305 aa3.47□□□□□ -1.85
HMGB3P18-201ENST00000406327 CXorf40AQ8TE69 158 aa3.47□□□□□ -1.85
HMGB3P18-201ENST00000406327 FGF14Q92915 247 aa3.47□□□□□ -1.85
HMGB3P18-201ENST00000406327 TOP1MTQ969P6 601 aa3.47□□□□□ -1.85
HMGB3P18-201ENST00000406327 MARC2Q969Z3 335 aa3.47□□□□□ -1.85
HMGB3P18-201ENST00000406327 TMA16Q96EY4 203 aaKnown RBP3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms