RNA–Protein interactions for RNA: ENST00000400908.6

RERE-204, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RERE, Length 5,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-204ENST00000400908 MAML2Q8IZL2 1156 aaPredicted RBP12.6□□□□□ -0.39
RERE-204ENST00000400908 KLHDC9Q8NEP7 349 aa12.6□□□□□ -0.39
RERE-204ENST00000400908 COA3Q9Y2R0 106 aaPredicted RBP12.6□□□□□ -0.39
RERE-204ENST00000400908 SDCBPO00560 298 aaPredicted RBP12.6□□□□□ -0.39
RERE-204ENST00000400908 SCRG1O75711 98 aa12.6□□□□□ -0.39
RERE-204ENST00000400908 TNFRSF4P43489 277 aa12.6□□□□□ -0.39
RERE-204ENST00000400908 UBE2MP61081 183 aaKnown RBP12.6□□□□□ -0.39
RERE-204ENST00000400908 TMEM241Q24JQ0 296 aa12.6□□□□□ -0.39
RERE-204ENST00000400908 TTC9Q92623 222 aa12.6□□□□□ -0.39
RERE-204ENST00000400908 C3orf30Q96M34 536 aa12.6□□□□□ -0.39
RERE-204ENST00000400908 KLF16Q9BXK1 252 aaPredicted RBP12.6□□□□□ -0.39
RERE-204ENST00000400908 MAP1LC3CQ9BXW4 147 aa12.6□□□□□ -0.39
RERE-204ENST00000400908 MRPL13Q9BYD1 178 aaKnown RBP12.6□□□□□ -0.39
RERE-204ENST00000400908 COL5A3P25940 1745 aaPredicted RBP12.6□□□□□ -0.39
RERE-204ENST00000400908 AP4M1O00189 453 aa12.6□□□□□ -0.39
RERE-204ENST00000400908 IRS1P35568 1242 aa12.6□□□□□ -0.39
RERE-204ENST00000400908 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.6□□□□□ -0.39
RERE-204ENST00000400908 LKAAEAR1Q8TD35 194 aa12.6□□□□□ -0.39
RERE-204ENST00000400908 PDE4DIPQ5VU43 2346 aa12.6□□□□□ -0.39
RERE-204ENST00000400908 C1orf105O95561 183 aa12.59□□□□□ -0.39
RERE-204ENST00000400908 MEOX2P50222 304 aa12.59□□□□□ -0.39
RERE-204ENST00000400908 SNRPGP62308 76 aaKnown RBP12.59□□□□□ -0.39
RERE-204ENST00000400908 LSM11P83369 360 aaKnown RBP eCLIP12.59□□□□□ -0.392e-9■■■■□ 22.6
RERE-204ENST00000400908 LPAL2Q16609 132 aa12.59□□□□□ -0.39
RERE-204ENST00000400908 SLC26A10Q8NG04 563 aa12.59□□□□□ -0.39
RERE-204ENST00000400908 SLCO4A1Q96BD0 722 aa12.59□□□□□ -0.39
RERE-204ENST00000400908 ADGRL4Q9HBW9 690 aa12.59□□□□□ -0.39
RERE-204ENST00000400908 KLRC4-KLRK1H3BQV0 150 aa12.59□□□□□ -0.39
RERE-204ENST00000400908 ZBTB25P24278 435 aa12.59□□□□□ -0.39
RERE-204ENST00000400908 NANOGP1Q8N7R0 232 aa12.59□□□□□ -0.39
RERE-204ENST00000400908 OR2G2Q8NGZ5 317 aa12.59□□□□□ -0.39
RERE-204ENST00000400908 CA5BP1Q8WTZ4 195 aa12.59□□□□□ -0.39
RERE-204ENST00000400908 RDH5Q92781 318 aa12.59□□□□□ -0.39
RERE-204ENST00000400908 FAM131CQ96AQ9 280 aa12.59□□□□□ -0.39
RERE-204ENST00000400908 RAB37Q96AX2 223 aa12.59□□□□□ -0.39
RERE-204ENST00000400908 SCMH1Q96GD3 660 aa12.59□□□□□ -0.39
RERE-204ENST00000400908 EGLN2Q96KS0 407 aa12.59□□□□□ -0.39
RERE-204ENST00000400908 RNF2Q99496 336 aa12.59□□□□□ -0.39
RERE-204ENST00000400908 TMEM208Q9BTX3 173 aa12.59□□□□□ -0.39
RERE-204ENST00000400908 ELOVL1Q9BW60 279 aa12.59□□□□□ -0.39
RERE-204ENST00000400908 HCFC1R1Q9NWW0 138 aa12.59□□□□□ -0.39
RERE-204ENST00000400908 ELOA3CA0A087WX78 387 aaPredicted RBP12.59□□□□□ -0.39
RERE-204ENST00000400908 ANKRD61A6NGH8 418 aa12.59□□□□□ -0.39
RERE-204ENST00000400908 GUSBP08236 651 aa12.59□□□□□ -0.39
RERE-204ENST00000400908 JUNBP17275 347 aaPredicted RBP12.59□□□□□ -0.39
RERE-204ENST00000400908 POLR2IP36954 125 aaKnown RBP12.59□□□□□ -0.39
RERE-204ENST00000400908 ZNF628Q5EBL2 1059 aa12.59□□□□□ -0.39
RERE-204ENST00000400908 OR2A2Q6IF42 318 aa12.59□□□□□ -0.39
RERE-204ENST00000400908 ANKRD16Q6P6B7 361 aa12.59□□□□□ -0.39
RERE-204ENST00000400908 MED25Q71SY5 747 aa12.59□□□□□ -0.39
RERE-204ENST00000400908 PRSS42Q7Z5A4 293 aa12.59□□□□□ -0.39
RERE-204ENST00000400908 UBALD1Q8TB05 177 aa12.59□□□□□ -0.39
RERE-204ENST00000400908 ZNF480Q8WV37 535 aa12.59□□□□□ -0.39
RERE-204ENST00000400908 KCNE4Q8WWG9 221 aa12.59□□□□□ -0.39
RERE-204ENST00000400908 FAM210BQ96KR6 192 aa12.59□□□□□ -0.39
RERE-204ENST00000400908 TMEM147Q9BVK8 224 aa12.59□□□□□ -0.39
RERE-204ENST00000400908 CLEC5AQ9NY25 188 aa12.59□□□□□ -0.39
RERE-204ENST00000400908 NAGKQ9UJ70 344 aa12.59□□□□□ -0.39
RERE-204ENST00000400908 FLVCR2Q9UPI3 526 aa12.59□□□□□ -0.39
RERE-204ENST00000400908 TMEM218A2RU14 115 aa12.59□□□□□ -0.39
RERE-204ENST00000400908 ACOT8O14734 319 aa12.59□□□□□ -0.39
RERE-204ENST00000400908 ST8SIA5O15466 376 aa12.59□□□□□ -0.39
RERE-204ENST00000400908 TTC32Q5I0X7 151 aa12.59□□□□□ -0.39
RERE-204ENST00000400908 DCAF12Q5T6F0 453 aa12.59□□□□□ -0.39
RERE-204ENST00000400908 H1FNTQ75WM6 255 aaPredicted RBP12.59□□□□□ -0.39
RERE-204ENST00000400908 C6orf201Q7Z4U5 140 aa12.59□□□□□ -0.39
RERE-204ENST00000400908 BCDIN3DQ7Z5W3 292 aaKnown RBP12.59□□□□□ -0.39
RERE-204ENST00000400908 EDARADDQ8WWZ3 215 aa12.59□□□□□ -0.39
RERE-204ENST00000400908 CLEC2DQ9UHP7 191 aa12.59□□□□□ -0.39
RERE-204ENST00000400908 CITO14578 2027 aa12.59□□□□□ -0.39
RERE-204ENST00000400908 CDK5RAP2Q96SN8 1893 aa12.59□□□□□ -0.39
RERE-204ENST00000400908 PRSS38A1L453 326 aa12.58□□□□□ -0.39
RERE-204ENST00000400908 G3V3Y1 287 aa12.58□□□□□ -0.39
RERE-204ENST00000400908 H0YGG7 62 aa12.58□□□□□ -0.39
RERE-204ENST00000400908 XRCC2O43543 280 aa12.58□□□□□ -0.39
RERE-204ENST00000400908 OR2J2O76002 312 aa12.58□□□□□ -0.39
RERE-204ENST00000400908 PSMB5P28074 263 aa12.58□□□□□ -0.39
RERE-204ENST00000400908 CEBPDP49716 269 aaPredicted RBP12.58□□□□□ -0.39
RERE-204ENST00000400908 PIGPP57054 158 aa12.58□□□□□ -0.39
RERE-204ENST00000400908 MAT1AQ00266 395 aaKnown RBP12.58□□□□□ -0.39
RERE-204ENST00000400908 OR4D10Q8NGI6 311 aa12.58□□□□□ -0.39
RERE-204ENST00000400908 ISG20Q96AZ6 181 aaKnown RBP12.58□□□□□ -0.39
RERE-204ENST00000400908 FER1L6-AS2Q96M78 137 aa12.58□□□□□ -0.39
RERE-204ENST00000400908 ADAT1Q9BUB4 502 aaKnown RBP12.58□□□□□ -0.39
RERE-204ENST00000400908 MMP24Q9Y5R2 645 aa12.58□□□□□ -0.39
RERE-204ENST00000400908 NPTNQ9Y639 398 aa12.58□□□□□ -0.39
RERE-204ENST00000400908 ADRA1AP35348 466 aa12.58□□□□□ -0.4
RERE-204ENST00000400908 COL5A1-AS1Q5SY13 56 aa12.58□□□□□ -0.4
RERE-204ENST00000400908 C1orf140Q5VVS0 124 aa12.58□□□□□ -0.4
RERE-204ENST00000400908 ZNF343Q6P1L6 599 aa12.58□□□□□ -0.4
RERE-204ENST00000400908 BPIFA4PQ86YQ2 179 aa12.58□□□□□ -0.4
RERE-204ENST00000400908 DCBLD2Q96PD2 775 aa12.58□□□□□ -0.4
RERE-204ENST00000400908 CTRCQ99895 268 aa12.58□□□□□ -0.4
RERE-204ENST00000400908 P2RY12Q9H244 342 aa12.58□□□□□ -0.4
RERE-204ENST00000400908 A4GALTQ9NPC4 353 aa12.58□□□□□ -0.4
RERE-204ENST00000400908 SHANK3Q9BYB0 1731 aa12.58□□□□□ -0.4
RERE-204ENST00000400908 M0R3E3 92 aa12.58□□□□□ -0.4
RERE-204ENST00000400908 RBP4P02753 201 aa12.58□□□□□ -0.4
RERE-204ENST00000400908 RPL27P61353 136 aaKnown RBP12.58□□□□□ -0.4
RERE-204ENST00000400908 SOWAHCQ53LP3 525 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms